RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
PTPRM-203ENST00000400060 SPAG11BQ08648 103 aa7.21□□□□□ -1.26
PTPRM-203ENST00000400060 BEAN1Q3B7T3 259 aa7.2□□□□□ -1.26
PTPRM-203ENST00000400060 ETDCA0A1B0GVM5 59 aa7.2□□□□□ -1.26
PTPRM-203ENST00000400060 Q8NA96 180 aa7.2□□□□□ -1.26
PTPRM-203ENST00000400060 MUC6Q6W4X9 2439 aa7.2□□□□□ -1.26
PTPRM-203ENST00000400060 BDP1A6H8Y1 2624 aa7.2□□□□□ -1.26
PTPRM-203ENST00000400060 PRB1P04280 392 aa7.2□□□□□ -1.26
PTPRM-203ENST00000400060 ADORA2A-AS1P86434 159 aa7.2□□□□□ -1.26
PTPRM-203ENST00000400060 LINC00337Q8N6G1 96 aa7.19□□□□□ -1.26
PTPRM-203ENST00000400060 FAM218AQ96MZ4 157 aa7.19□□□□□ -1.26
PTPRM-203ENST00000400060 OTOGLQ3ZCN5 2332 aa7.19□□□□□ -1.26
PTPRM-203ENST00000400060 PSPHP1O15172 72 aa7.19□□□□□ -1.26
PTPRM-203ENST00000400060 CYP4F30PQ9H0H9 118 aa7.19□□□□□ -1.26
PTPRM-203ENST00000400060 Q8N2B8 174 aa7.19□□□□□ -1.26
PTPRM-203ENST00000400060 LINC00575Q6W349 94 aa7.19□□□□□ -1.26
PTPRM-203ENST00000400060 WFDC10AQ9H1F0 79 aa7.19□□□□□ -1.26
PTPRM-203ENST00000400060 EDN2P20800 178 aa7.18□□□□□ -1.26
PTPRM-203ENST00000400060 C22orf34Q6ZV56 151 aa7.18□□□□□ -1.26
PTPRM-203ENST00000400060 UTRNP46939 3433 aa7.18□□□□□ -1.26
PTPRM-203ENST00000400060 IGHV4-61A0A0C4DH41 118 aa7.18□□□□□ -1.26
PTPRM-203ENST00000400060 HTN3P15516 51 aa7.18□□□□□ -1.26
PTPRM-203ENST00000400060 COX6A2Q02221 97 aa7.18□□□□□ -1.26
PTPRM-203ENST00000400060 IGHV4-28A0A0C4DH34 117 aa7.17□□□□□ -1.26
PTPRM-203ENST00000400060 DEFB105AQ8NG35 78 aa7.17□□□□□ -1.26
PTPRM-203ENST00000400060 Q6ZQT0 140 aa7.17□□□□□ -1.26
PTPRM-203ENST00000400060 KTN1-AS1Q86SY8 53 aa7.17□□□□□ -1.26
PTPRM-203ENST00000400060 FAM30AQ9NZY2 134 aa7.17□□□□□ -1.26
PTPRM-203ENST00000400060 TRBV6-8A0A0A6YYG3 113 aa7.17□□□□□ -1.26
PTPRM-203ENST00000400060 DEFB130BP0DP73 79 aa7.17□□□□□ -1.26
PTPRM-203ENST00000400060 DEFB130AP0DP74 79 aa7.17□□□□□ -1.26
PTPRM-203ENST00000400060 ZFP36P26651 326 aaKnown RBP7.17□□□□□ -1.26
PTPRM-203ENST00000400060 CELA1Q9UNI1 258 aa7.16□□□□□ -1.26
PTPRM-203ENST00000400060 A6NDX4 124 aa7.16□□□□□ -1.26
PTPRM-203ENST00000400060 DEFB112Q30KQ8 113 aa7.16□□□□□ -1.26
PTPRM-203ENST00000400060 C6orf223Q8N319 242 aa7.16□□□□□ -1.26
PTPRM-203ENST00000400060 CAMK2N2Q96S95 79 aa7.16□□□□□ -1.26
PTPRM-203ENST00000400060 H3BPC8 53 aa7.16□□□□□ -1.26
PTPRM-203ENST00000400060 DHRS4-AS1Q9P1J3 65 aa7.16□□□□□ -1.26
PTPRM-203ENST00000400060 DSCAML1Q8TD84 2053 aa7.15□□□□□ -1.26
PTPRM-203ENST00000400060 ACACBO00763 2458 aa7.15□□□□□ -1.26
PTPRM-203ENST00000400060 IGHV4-59P01825 116 aa7.15□□□□□ -1.26
PTPRM-203ENST00000400060 GYPEP15421 78 aa7.15□□□□□ -1.26
PTPRM-203ENST00000400060 SPG11Q96JI7 2443 aa7.15□□□□□ -1.26
PTPRM-203ENST00000400060 LINC00269Q8N2A0 174 aa7.15□□□□□ -1.26
PTPRM-203ENST00000400060 CD164L2Q6UWJ8 174 aa7.15□□□□□ -1.27
PTPRM-203ENST00000400060 IGHV4-38-2P0DP08 117 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 MAPK1IP1LQ8NDC0 245 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 B9D2Q9BPU9 175 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 FAM208BQ5VWN6 2430 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 M0R378 163 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 PROK1P58294 105 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 KLK9Q2XQG4 91 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 CLPSL2Q6UWE3 100 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 MAP6D1Q9H9H5 199 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 LINC00959A0A1B0GUT2 108 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 PRB2P02812 416 aaPredicted RBP7.14□□□□□ -1.27
PTPRM-203ENST00000400060 OBSCN-AS1Q96MR7 158 aa7.14□□□□□ -1.27
PTPRM-203ENST00000400060 PTPRQQ9UMZ3 2332 aa7.13□□□□□ -1.27
PTPRM-203ENST00000400060 ZNF73O43830 326 aaPredicted RBP7.13□□□□□ -1.27
PTPRM-203ENST00000400060 ZNF843Q8N446 348 aa7.13□□□□□ -1.27
PTPRM-203ENST00000400060 Q96MF0 132 aa7.13□□□□□ -1.27
PTPRM-203ENST00000400060 RAI1Q7Z5J4 1906 aaPredicted RBP7.13□□□□□ -1.27
PTPRM-203ENST00000400060 IGHV4-30-2A0A087WSY4 118 aa7.13□□□□□ -1.27
PTPRM-203ENST00000400060 LINC00208Q96KT6 92 aa7.12□□□□□ -1.27
PTPRM-203ENST00000400060 PTPRBP23467 1997 aa7.12□□□□□ -1.27
PTPRM-203ENST00000400060 DEFB114Q30KQ6 69 aa7.12□□□□□ -1.27
PTPRM-203ENST00000400060 CHCHD10Q8WYQ3 142 aaPredicted RBP7.12□□□□□ -1.27
PTPRM-203ENST00000400060 TRAV10A0A0B4J240 114 aa7.11□□□□□ -1.27
PTPRM-203ENST00000400060 LMO4P61968 165 aa7.11□□□□□ -1.27
PTPRM-203ENST00000400060 ATP11AUNQ6ZP68 121 aa7.11□□□□□ -1.27
PTPRM-203ENST00000400060 C1orf158Q8N1D5 194 aa7.11□□□□□ -1.27
PTPRM-203ENST00000400060 LINC00474Q9P2X8 69 aa7.11□□□□□ -1.27
PTPRM-203ENST00000400060 LY6G6DO95868 133 aa7.11□□□□□ -1.27
PTPRM-203ENST00000400060 EIF4EBP3O60516 100 aaPredicted RBP7.1□□□□□ -1.27
PTPRM-203ENST00000400060 C4orf3Q8WVX3 66 aa7.1□□□□□ -1.27
PTPRM-203ENST00000400060 LRCOL1A6NCL2 159 aa7.1□□□□□ -1.27
PTPRM-203ENST00000400060 HIGD2AQ9BW72 106 aa7.1□□□□□ -1.27
PTPRM-203ENST00000400060 PRO0255Q9UI72 69 aa7.1□□□□□ -1.27
PTPRM-203ENST00000400060 TM2D3Q9BRN9 247 aa7.09□□□□□ -1.27
PTPRM-203ENST00000400060 REG3AQ06141 175 aa7.09□□□□□ -1.27
PTPRM-203ENST00000400060 HCG22E2RYF7 251 aa7.09□□□□□ -1.27
PTPRM-203ENST00000400060 C3orf84H3BNL1 204 aa7.09□□□□□ -1.27
PTPRM-203ENST00000400060 ELOF1P60002 83 aaKnown RBP7.09□□□□□ -1.27
PTPRM-203ENST00000400060 Q1T7F1 81 aa7.09□□□□□ -1.27
PTPRM-203ENST00000400060 SPATA3Q8NHX4 192 aa7.09□□□□□ -1.27
PTPRM-203ENST00000400060 NACAE9PAV3 2078 aa7.09□□□□□ -1.27
PTPRM-203ENST00000400060 Q6ZTI0 123 aa7.09□□□□□ -1.27
PTPRM-203ENST00000400060 LINC00167Q96N53 147 aa7.09□□□□□ -1.27
PTPRM-203ENST00000400060 IGLV1-40P01703 118 aa7.08□□□□□ -1.28
PTPRM-203ENST00000400060 APOC4P55056 127 aa7.08□□□□□ -1.28
PTPRM-203ENST00000400060 PLXNB1O43157 2135 aa7.08□□□□□ -1.28
PTPRM-203ENST00000400060 C10orf25Q5T742 122 aa7.07□□□□□ -1.28
PTPRM-203ENST00000400060 C7orf65Q6ZTY9 151 aa7.07□□□□□ -1.28
PTPRM-203ENST00000400060 SLURP1P55000 103 aa7.07□□□□□ -1.28
PTPRM-203ENST00000400060 IL17DQ8TAD2 202 aa7.07□□□□□ -1.28
PTPRM-203ENST00000400060 C9orf66Q5T8R8 295 aa7.06□□□□□ -1.28
PTPRM-203ENST00000400060 LCA10Q71F78 164 aa7.06□□□□□ -1.28
PTPRM-203ENST00000400060 CUL9Q8IWT3 2517 aa7.06□□□□□ -1.28
PTPRM-203ENST00000400060 DEFB113Q30KQ7 82 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms