RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 C19orf73Q9NVV2 129 aa8.29□□□□□ -1.08
ITSN1-211ENST00000399355 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
ITSN1-211ENST00000399355 PRR3P79522 188 aaKnown RBP8.29□□□□□ -1.08
ITSN1-211ENST00000399355 DEFB135Q30KP9 77 aa8.28□□□□□ -1.08
ITSN1-211ENST00000399355 C1QTNF4Q9BXJ3 329 aa8.28□□□□□ -1.08
ITSN1-211ENST00000399355 MEIG1Q5JSS6 88 aa8.28□□□□□ -1.08
ITSN1-211ENST00000399355 PRIMA1Q86XR5 153 aa8.28□□□□□ -1.08
ITSN1-211ENST00000399355 K7EQD1 137 aa8.28□□□□□ -1.08
ITSN1-211ENST00000399355 RS1O15537 224 aa8.28□□□□□ -1.08
ITSN1-211ENST00000399355 PAPPA-AS1Q5QFB9 102 aa8.28□□□□□ -1.08
ITSN1-211ENST00000399355 CHCHD5Q9BSY4 110 aa8.28□□□□□ -1.08
ITSN1-211ENST00000399355 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
ITSN1-211ENST00000399355 C2orf82Q6UX34 121 aa8.27□□□□□ -1.09
ITSN1-211ENST00000399355 SIGMAR1Q99720 223 aa8.27□□□□□ -1.09
ITSN1-211ENST00000399355 TMEM262E9PQX1 116 aa8.26□□□□□ -1.09
ITSN1-211ENST00000399355 XCL1P47992 114 aa8.26□□□□□ -1.09
ITSN1-211ENST00000399355 Q9HAA7 133 aa8.26□□□□□ -1.09
ITSN1-211ENST00000399355 RPL36AP83881 106 aaKnown RBP8.26□□□□□ -1.09
ITSN1-211ENST00000399355 RPL36ALQ969Q0 106 aaKnown RBP8.26□□□□□ -1.09
ITSN1-211ENST00000399355 BEAN1Q3B7T3 259 aa8.25□□□□□ -1.09
ITSN1-211ENST00000399355 TINCRA0A1B0GVN0 87 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 PF4P02776 101 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
ITSN1-211ENST00000399355 CDC42SE2Q9NRR3 84 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 ICOSQ9Y6W8 199 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 A8MTW9 85 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 LY6G6DO95868 133 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 CSNK1G2-AS1Q8NCQ2 148 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 FAM218AQ96MZ4 157 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 UBE2L6O14933 153 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 C3orf56Q8N813 242 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 PYGO1Q9Y3Y4 419 aa8.24□□□□□ -1.09
ITSN1-211ENST00000399355 C9orf129Q5T035 196 aaKnown RBP8.23□□□□□ -1.09
ITSN1-211ENST00000399355 TEN1Q86WV5 123 aa8.23□□□□□ -1.09
ITSN1-211ENST00000399355 TRBV20-1A0A075B6N2 111 aa8.23□□□□□ -1.09
ITSN1-211ENST00000399355 IGLV1-51P01701 117 aa8.23□□□□□ -1.09
ITSN1-211ENST00000399355 MIAQ16674 131 aa8.23□□□□□ -1.09
ITSN1-211ENST00000399355 ATP5G1P05496 136 aa8.23□□□□□ -1.09
ITSN1-211ENST00000399355 LINC01620Q4KN68 170 aa8.23□□□□□ -1.09
ITSN1-211ENST00000399355 TTC32Q5I0X7 151 aa8.23□□□□□ -1.09
ITSN1-211ENST00000399355 ZFAND6Q6FIF0 208 aa8.23□□□□□ -1.09
ITSN1-211ENST00000399355 TRAV26-1A0A087WT03 109 aa8.22□□□□□ -1.09
ITSN1-211ENST00000399355 LINC00308Q8TCZ7 52 aa8.22□□□□□ -1.09
ITSN1-211ENST00000399355 H7C423 109 aa8.22□□□□□ -1.09
ITSN1-211ENST00000399355 GYPEP15421 78 aa8.22□□□□□ -1.09
ITSN1-211ENST00000399355 SPANXA1Q9NS26 97 aa8.22□□□□□ -1.09
ITSN1-211ENST00000399355 TRAV8-4A0A0B4J246 113 aa8.21□□□□□ -1.09
ITSN1-211ENST00000399355 TRAV4A0A0B4J268 109 aa8.21□□□□□ -1.09
ITSN1-211ENST00000399355 F5H768 121 aa8.21□□□□□ -1.1
ITSN1-211ENST00000399355 FHL2Q14192 279 aa8.21□□□□□ -1.1
ITSN1-211ENST00000399355 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.1
ITSN1-211ENST00000399355 IL17DQ8TAD2 202 aa8.21□□□□□ -1.1
ITSN1-211ENST00000399355 CELA1Q9UNI1 258 aa8.21□□□□□ -1.1
ITSN1-211ENST00000399355 SLPIP03973 132 aa8.2□□□□□ -1.1
ITSN1-211ENST00000399355 FAM110AQ9BQ89 295 aa8.2□□□□□ -1.1
ITSN1-211ENST00000399355 FAM222AQ5U5X8 452 aa8.19□□□□□ -1.1
ITSN1-211ENST00000399355 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
ITSN1-211ENST00000399355 RETNQ9HD89 108 aa8.19□□□□□ -1.1
ITSN1-211ENST00000399355 LRRC75A-AS1Q8N1F1 130 aa8.19□□□□□ -1.1
ITSN1-211ENST00000399355 PRB2P02812 416 aaPredicted RBP8.19□□□□□ -1.1
ITSN1-211ENST00000399355 LINC00158P58513 81 aa8.19□□□□□ -1.1
ITSN1-211ENST00000399355 SPATA25Q9BR10 227 aa8.19□□□□□ -1.1
ITSN1-211ENST00000399355 J3QKU1 62 aa8.18□□□□□ -1.1
ITSN1-211ENST00000399355 LINC00337Q8N6G1 96 aa8.18□□□□□ -1.1
ITSN1-211ENST00000399355 RNASE1P07998 156 aaKnown RBP8.18□□□□□ -1.1
ITSN1-211ENST00000399355 SBSPONQ8IVN8 264 aa8.18□□□□□ -1.1
ITSN1-211ENST00000399355 PPDPFLQ8WWR9 84 aa8.18□□□□□ -1.1
ITSN1-211ENST00000399355 DNAH10Q8IVF4 4471 aa8.17□□□□□ -1.1
ITSN1-211ENST00000399355 A0A0B4J2C4 111 aa8.17□□□□□ -1.1
ITSN1-211ENST00000399355 NDUFA1O15239 70 aa8.16□□□□□ -1.1
ITSN1-211ENST00000399355 OXLD1Q5BKU9 147 aa8.16□□□□□ -1.1
ITSN1-211ENST00000399355 TRBV6-8A0A0A6YYG3 113 aa8.16□□□□□ -1.1
ITSN1-211ENST00000399355 HILS1P60008 231 aa8.16□□□□□ -1.1
ITSN1-211ENST00000399355 LINC00269Q8N2A0 174 aa8.16□□□□□ -1.1
ITSN1-211ENST00000399355 C6orf223Q8N319 242 aa8.16□□□□□ -1.1
ITSN1-211ENST00000399355 IGKV2-28A0A075B6P5 120 aa8.15□□□□□ -1.1
ITSN1-211ENST00000399355 IGKV2D-28P01615 120 aa8.15□□□□□ -1.1
ITSN1-211ENST00000399355 IGLV5-39A0A0G2JS06 123 aa8.15□□□□□ -1.1
ITSN1-211ENST00000399355 X6R8D5 127 aa8.15□□□□□ -1.1
ITSN1-211ENST00000399355 HERVK_113P63121 156 aa8.15□□□□□ -1.11
ITSN1-211ENST00000399355 OR13C6PQ8NH95 151 aa8.15□□□□□ -1.11
ITSN1-211ENST00000399355 CMYA5Q8N3K9 4069 aa8.15□□□□□ -1.11
ITSN1-211ENST00000399355 ATXN8Q156A1 80 aa8.14□□□□□ -1.11
ITSN1-211ENST00000399355 Q8NDZ9 215 aa8.14□□□□□ -1.11
ITSN1-211ENST00000399355 CKS1BP61024 79 aa8.14□□□□□ -1.11
ITSN1-211ENST00000399355 A0A087WYN8 130 aa8.14□□□□□ -1.11
ITSN1-211ENST00000399355 RNF183Q96D59 192 aa8.14□□□□□ -1.11
ITSN1-211ENST00000399355 C16orf74Q96GX8 76 aa8.14□□□□□ -1.11
ITSN1-211ENST00000399355 CLUHP3Q96NS8 147 aa8.14□□□□□ -1.11
ITSN1-211ENST00000399355 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.13□□□□□ -1.11
ITSN1-211ENST00000399355 DAZ2Q13117 558 aaKnown RBP8.13□□□□□ -1.11
ITSN1-211ENST00000399355 DAZ4Q86SG3 579 aaKnown RBP8.13□□□□□ -1.11
ITSN1-211ENST00000399355 DAZ3Q9NR90 486 aaKnown RBP8.13□□□□□ -1.11
ITSN1-211ENST00000399355 SPANXDQ9BXN6 97 aa8.13□□□□□ -1.11
ITSN1-211ENST00000399355 SPANXCQ9NY87 97 aa8.13□□□□□ -1.11
ITSN1-211ENST00000399355 IGLV5-45A0A087WSX0 123 aa8.13□□□□□ -1.11
ITSN1-211ENST00000399355 IGHV3OR16-9A0A0B4J2B5 98 aa8.12□□□□□ -1.11
ITSN1-211ENST00000399355 EDA2RQ9HAV5 297 aa8.12□□□□□ -1.11
ITSN1-211ENST00000399355 TRBV30A0A0K0K1B3 111 aa8.12□□□□□ -1.11
ITSN1-211ENST00000399355 PAX4O43316 350 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms