RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.06
COL25A1-202ENST00000399127 ZNF22P17026 224 aaPredicted RBP8.4□□□□□ -1.06
COL25A1-202ENST00000399127 SRSF9Q13242 221 aaKnown RBP eCLIP8.4□□□□□ -1.06
COL25A1-202ENST00000399127 SLC25A29Q8N8R3 303 aa8.4□□□□□ -1.06
COL25A1-202ENST00000399127 KIR2DL5BQ8NHK3 375 aa8.4□□□□□ -1.06
COL25A1-202ENST00000399127 NTN5Q8WTR8 489 aaPredicted RBP8.4□□□□□ -1.06
COL25A1-202ENST00000399127 UBE2D4Q9Y2X8 147 aa8.4□□□□□ -1.06
COL25A1-202ENST00000399127 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.07
COL25A1-202ENST00000399127 J3QQQ9 107 aa8.39□□□□□ -1.07
COL25A1-202ENST00000399127 TMEM223A0PJW6 202 aa8.39□□□□□ -1.07
COL25A1-202ENST00000399127 K7EQD1 137 aa8.39□□□□□ -1.07
COL25A1-202ENST00000399127 C3orf22Q8N5N4 141 aa8.39□□□□□ -1.07
COL25A1-202ENST00000399127 C16orf74Q96GX8 76 aa8.39□□□□□ -1.07
COL25A1-202ENST00000399127 AMELXQ99217 191 aa8.39□□□□□ -1.07
COL25A1-202ENST00000399127 DAZ2Q13117 558 aaKnown RBP8.38□□□□□ -1.07
COL25A1-202ENST00000399127 LOC100131303A0A0U1RQF7 123 aa8.38□□□□□ -1.07
COL25A1-202ENST00000399127 LGALS3P17931 250 aaKnown RBP8.38□□□□□ -1.07
COL25A1-202ENST00000399127 TRAV8-3A0A0A6YYJ7 113 aa8.37□□□□□ -1.07
COL25A1-202ENST00000399127 A0A0J9YY99 117 aa8.37□□□□□ -1.07
COL25A1-202ENST00000399127 FAM236AA0A1B0GUQ0 79 aa8.37□□□□□ -1.07
COL25A1-202ENST00000399127 FAM236BA0A1B0GV22 79 aa8.37□□□□□ -1.07
COL25A1-202ENST00000399127 F8WDY8 70 aa8.37□□□□□ -1.07
COL25A1-202ENST00000399127 RPS28P62857 69 aaKnown RBP8.37□□□□□ -1.07
COL25A1-202ENST00000399127 RPL36AP83881 106 aaKnown RBP8.37□□□□□ -1.07
COL25A1-202ENST00000399127 KRTAP24-1Q3LI83 254 aa8.37□□□□□ -1.07
COL25A1-202ENST00000399127 MRAPQ8TCY5 172 aa8.37□□□□□ -1.07
COL25A1-202ENST00000399127 RPL36ALQ969Q0 106 aaKnown RBP8.37□□□□□ -1.07
COL25A1-202ENST00000399127 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
COL25A1-202ENST00000399127 DGAT2L7PQ6IED9 249 aa8.37□□□□□ -1.07
COL25A1-202ENST00000399127 TRBV7-7A0A0K0K1E9 115 aa8.36□□□□□ -1.07
COL25A1-202ENST00000399127 A8MZ25 164 aa8.36□□□□□ -1.07
COL25A1-202ENST00000399127 UQCRQO14949 82 aa8.36□□□□□ -1.07
COL25A1-202ENST00000399127 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
COL25A1-202ENST00000399127 NTM-AS1Q6ZSK4 140 aa8.36□□□□□ -1.07
COL25A1-202ENST00000399127 LEPROTO15243 131 aa8.35□□□□□ -1.07
COL25A1-202ENST00000399127 DEFB130BP0DP73 79 aa8.35□□□□□ -1.07
COL25A1-202ENST00000399127 DEFB130AP0DP74 79 aa8.35□□□□□ -1.07
COL25A1-202ENST00000399127 LINC00526Q96FQ7 95 aa8.35□□□□□ -1.07
COL25A1-202ENST00000399127 TIMM21Q9BVV7 248 aa8.35□□□□□ -1.07
COL25A1-202ENST00000399127 TRGV4A0A0C4DH28 118 aa8.34□□□□□ -1.07
COL25A1-202ENST00000399127 TRBV10-1A0A0K0K1A3 114 aa8.34□□□□□ -1.07
COL25A1-202ENST00000399127 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
COL25A1-202ENST00000399127 RPL13AP40429 203 aaKnown RBP8.34□□□□□ -1.07
COL25A1-202ENST00000399127 C4orf26Q17RF5 130 aa8.34□□□□□ -1.07
COL25A1-202ENST00000399127 C9orf66Q5T8R8 295 aa8.34□□□□□ -1.07
COL25A1-202ENST00000399127 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
COL25A1-202ENST00000399127 OVOL2Q9BRP0 275 aa8.33□□□□□ -1.08
COL25A1-202ENST00000399127 DAZ4Q86SG3 579 aaKnown RBP8.33□□□□□ -1.08
COL25A1-202ENST00000399127 PRIMA1Q86XR5 153 aa8.33□□□□□ -1.08
COL25A1-202ENST00000399127 DAZ3Q9NR90 486 aaKnown RBP8.33□□□□□ -1.08
COL25A1-202ENST00000399127 PKD1L1Q8TDX9 2849 aa8.32□□□□□ -1.08
COL25A1-202ENST00000399127 TINCRA0A1B0GVN0 87 aa8.32□□□□□ -1.08
COL25A1-202ENST00000399127 CDKN2A-AS1Q9UH64 79 aa8.32□□□□□ -1.08
COL25A1-202ENST00000399127 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
COL25A1-202ENST00000399127 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
COL25A1-202ENST00000399127 GAGE2AQ6NT46 116 aa8.32□□□□□ -1.08
COL25A1-202ENST00000399127 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
COL25A1-202ENST00000399127 STAB1Q9NY15 2570 aa8.32□□□□□ -1.08
COL25A1-202ENST00000399127 TRAV13-1A0A0B4J241 112 aa8.31□□□□□ -1.08
COL25A1-202ENST00000399127 CFC1BP0CG36 223 aa8.31□□□□□ -1.08
COL25A1-202ENST00000399127 CFC1P0CG37 223 aa8.31□□□□□ -1.08
COL25A1-202ENST00000399127 COX6A2Q02221 97 aa8.31□□□□□ -1.08
COL25A1-202ENST00000399127 FHL2Q14192 279 aa8.31□□□□□ -1.08
COL25A1-202ENST00000399127 DEFB4AO15263 64 aa8.31□□□□□ -1.08
COL25A1-202ENST00000399127 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
COL25A1-202ENST00000399127 DEFB135Q30KP9 77 aa8.3□□□□□ -1.08
COL25A1-202ENST00000399127 TRBV6-4A0A1B0GX49 114 aa8.3□□□□□ -1.08
COL25A1-202ENST00000399127 VSIG2Q96IQ7 327 aa8.3□□□□□ -1.08
COL25A1-202ENST00000399127 X6R8D5 127 aa8.3□□□□□ -1.08
COL25A1-202ENST00000399127 A0A0J9YXY3 114 aa8.29□□□□□ -1.08
COL25A1-202ENST00000399127 UBE2L6O14933 153 aa8.29□□□□□ -1.08
COL25A1-202ENST00000399127 LINC01620Q4KN68 170 aa8.29□□□□□ -1.08
COL25A1-202ENST00000399127 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
COL25A1-202ENST00000399127 PRO1854Q9UHT4 67 aa8.29□□□□□ -1.08
COL25A1-202ENST00000399127 Q5XG85 94 aa8.29□□□□□ -1.08
COL25A1-202ENST00000399127 NDUFA12Q9UI09 145 aa8.29□□□□□ -1.08
COL25A1-202ENST00000399127 FBN1P35555 2871 aaKnown RBP8.28□□□□□ -1.08
COL25A1-202ENST00000399127 MAST4O15021 2626 aa8.28□□□□□ -1.08
COL25A1-202ENST00000399127 OXTP01178 125 aa8.28□□□□□ -1.08
COL25A1-202ENST00000399127 LINC00242Q5T6M2 205 aa8.28□□□□□ -1.08
COL25A1-202ENST00000399127 TMEM243Q9BU79 118 aa8.28□□□□□ -1.08
COL25A1-202ENST00000399127 IGKV3OR2-268A0A0C4DH90 116 aa8.28□□□□□ -1.08
COL25A1-202ENST00000399127 FAM240AA0A1B0GVK7 77 aa8.28□□□□□ -1.08
COL25A1-202ENST00000399127 LINC01600Q96MT4 127 aa8.28□□□□□ -1.08
COL25A1-202ENST00000399127 NPC2P61916 151 aa8.27□□□□□ -1.09
COL25A1-202ENST00000399127 MUSTN1Q8IVN3 82 aa8.27□□□□□ -1.09
COL25A1-202ENST00000399127 DPH3Q96FX2 82 aa8.27□□□□□ -1.09
COL25A1-202ENST00000399127 IMUPQ9GZP8 106 aa8.27□□□□□ -1.09
COL25A1-202ENST00000399127 CDC42SE2Q9NRR3 84 aa8.27□□□□□ -1.09
COL25A1-202ENST00000399127 PRSS2P07478 247 aa8.27□□□□□ -1.09
COL25A1-202ENST00000399127 CRYGAP11844 174 aa8.27□□□□□ -1.09
COL25A1-202ENST00000399127 COX7CP15954 63 aa8.27□□□□□ -1.09
COL25A1-202ENST00000399127 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
COL25A1-202ENST00000399127 TRBV10-2A0A0K0K1G8 114 aa8.26□□□□□ -1.09
COL25A1-202ENST00000399127 ATXN8Q156A1 80 aa8.26□□□□□ -1.09
COL25A1-202ENST00000399127 ANK2Q01484 3957 aa8.26□□□□□ -1.09
COL25A1-202ENST00000399127 A0A096LPF7 62 aa8.26□□□□□ -1.09
COL25A1-202ENST00000399127 H7C2G1 150 aa8.26□□□□□ -1.09
COL25A1-202ENST00000399127 FAM222AQ5U5X8 452 aa8.26□□□□□ -1.09
COL25A1-202ENST00000399127 hADV29S1A0JD25 119 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms