RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 KPRPQ5T749 579 aaPredicted RBP10.3□□□□□ -0.76
PCDHGA11-201ENST00000398587 TRAV10A0A0B4J240 114 aa10.3□□□□□ -0.76
PCDHGA11-201ENST00000398587 UBE2AP49459 152 aa10.3□□□□□ -0.76
PCDHGA11-201ENST00000398587 LINC00643Q86TS7 51 aa10.29□□□□□ -0.76
PCDHGA11-201ENST00000398587 ATOX1O00244 68 aa10.29□□□□□ -0.76
PCDHGA11-201ENST00000398587 C14orf132Q9NPU4 83 aa10.29□□□□□ -0.76
PCDHGA11-201ENST00000398587 AGRNO00468 2067 aa10.29□□□□□ -0.76
PCDHGA11-201ENST00000398587 PCNTO95613 3336 aa10.29□□□□□ -0.76
PCDHGA11-201ENST00000398587 IGLV2-18A0A075B6J9 118 aa10.29□□□□□ -0.76
PCDHGA11-201ENST00000398587 FAM236AA0A1B0GUQ0 79 aa10.29□□□□□ -0.76
PCDHGA11-201ENST00000398587 FAM236BA0A1B0GV22 79 aa10.29□□□□□ -0.76
PCDHGA11-201ENST00000398587 IGHV4-30-4P0DP06 118 aa10.29□□□□□ -0.76
PCDHGA11-201ENST00000398587 LINC00242Q5T6M2 205 aa10.29□□□□□ -0.76
PCDHGA11-201ENST00000398587 TEX49A0A1B0GTD5 131 aa10.28□□□□□ -0.76
PCDHGA11-201ENST00000398587 XAGE1AQ9HD64 81 aa10.28□□□□□ -0.76
PCDHGA11-201ENST00000398587 BEAN1Q3B7T3 259 aa10.28□□□□□ -0.76
PCDHGA11-201ENST00000398587 SYCNQ0VAF6 134 aa10.27□□□□□ -0.77
PCDHGA11-201ENST00000398587 IGKV2-24A0A0C4DH68 120 aa10.27□□□□□ -0.77
PCDHGA11-201ENST00000398587 OXLD1Q5BKU9 147 aa10.27□□□□□ -0.77
PCDHGA11-201ENST00000398587 B5MCH6 92 aa10.27□□□□□ -0.77
PCDHGA11-201ENST00000398587 PTPRBP23467 1997 aa10.27□□□□□ -0.77
PCDHGA11-201ENST00000398587 IGLV4-69A0A075B6H9 119 aa10.26□□□□□ -0.77
PCDHGA11-201ENST00000398587 A0A1B0GX51 115 aa10.26□□□□□ -0.77
PCDHGA11-201ENST00000398587 POM121L12Q8N7R1 296 aa10.26□□□□□ -0.77
PCDHGA11-201ENST00000398587 CHCHD7Q9BUK0 85 aa10.26□□□□□ -0.77
PCDHGA11-201ENST00000398587 C6orf99Q4VX62 202 aa10.25□□□□□ -0.77
PCDHGA11-201ENST00000398587 CLUHP3Q96NS8 147 aa10.25□□□□□ -0.77
PCDHGA11-201ENST00000398587 Q8N2B8 174 aa10.25□□□□□ -0.77
PCDHGA11-201ENST00000398587 Q8IZM0 81 aa10.24□□□□□ -0.77
PCDHGA11-201ENST00000398587 CSDC2Q9Y534 153 aaKnown RBP10.24□□□□□ -0.77
PCDHGA11-201ENST00000398587 AMELXQ99217 191 aa10.23□□□□□ -0.77
PCDHGA11-201ENST00000398587 LST1O00453 97 aa10.23□□□□□ -0.77
PCDHGA11-201ENST00000398587 KIF25-AS1Q9Y6Z4 181 aa10.22□□□□□ -0.77
PCDHGA11-201ENST00000398587 SMIM1B2RUZ4 78 aa10.22□□□□□ -0.77
PCDHGA11-201ENST00000398587 NDUFB1O75438 58 aa10.22□□□□□ -0.77
PCDHGA11-201ENST00000398587 FHL2Q14192 279 aa10.21□□□□□ -0.77
PCDHGA11-201ENST00000398587 MUC7Q8TAX7 377 aa10.21□□□□□ -0.77
PCDHGA11-201ENST00000398587 LINC00526Q96FQ7 95 aa10.21□□□□□ -0.77
PCDHGA11-201ENST00000398587 SLPIP03973 132 aa10.21□□□□□ -0.77
PCDHGA11-201ENST00000398587 HIGD2AQ9BW72 106 aa10.21□□□□□ -0.78
PCDHGA11-201ENST00000398587 COX17Q14061 63 aa10.2□□□□□ -0.78
PCDHGA11-201ENST00000398587 LINC00694P0DN24 101 aa10.2□□□□□ -0.78
PCDHGA11-201ENST00000398587 HTTP42858 3142 aa10.19□□□□□ -0.78
PCDHGA11-201ENST00000398587 TSPEAR-AS2P59090 65 aa10.19□□□□□ -0.78
PCDHGA11-201ENST00000398587 CHD9Q3L8U1 2897 aa10.19□□□□□ -0.78
PCDHGA11-201ENST00000398587 A0A087WZ39 114 aa10.19□□□□□ -0.78
PCDHGA11-201ENST00000398587 Q6ZSN1 163 aa10.19□□□□□ -0.78
PCDHGA11-201ENST00000398587 MT-ATP8P03928 68 aa10.18□□□□□ -0.78
PCDHGA11-201ENST00000398587 B9D2Q9BPU9 175 aa10.18□□□□□ -0.78
PCDHGA11-201ENST00000398587 TRAV23DV6A0A075B6W5 121 aa10.18□□□□□ -0.78
PCDHGA11-201ENST00000398587 SMIM20Q8N5G0 67 aa10.18□□□□□ -0.78
PCDHGA11-201ENST00000398587 IGLV4-60A0A075B6I1 120 aa10.17□□□□□ -0.78
PCDHGA11-201ENST00000398587 NDUFS5O43920 106 aa10.17□□□□□ -0.78
PCDHGA11-201ENST00000398587 SMIM11BQ8TCY0 68 aa10.17□□□□□ -0.78
PCDHGA11-201ENST00000398587 FAM19A4Q96LR4 140 aa10.17□□□□□ -0.78
PCDHGA11-201ENST00000398587 A0A0J9YWU9 116 aa10.17□□□□□ -0.78
PCDHGA11-201ENST00000398587 NANOS2P60321 138 aaKnown RBP10.17□□□□□ -0.78
PCDHGA11-201ENST00000398587 RNF183Q96D59 192 aa10.16□□□□□ -0.78
PCDHGA11-201ENST00000398587 M0R378 163 aa10.16□□□□□ -0.78
PCDHGA11-201ENST00000398587 CYSRT1A8MQ03 144 aa10.16□□□□□ -0.78
PCDHGA11-201ENST00000398587 COX6A2Q02221 97 aa10.16□□□□□ -0.78
PCDHGA11-201ENST00000398587 KLK9Q2XQG4 91 aa10.15□□□□□ -0.78
PCDHGA11-201ENST00000398587 BPY2O14599 106 aa10.14□□□□□ -0.79
PCDHGA11-201ENST00000398587 FAM19A1Q7Z5A9 133 aa10.14□□□□□ -0.79
PCDHGA11-201ENST00000398587 Q6ZQY7 126 aa10.14□□□□□ -0.79
PCDHGA11-201ENST00000398587 COL27A1Q8IZC6 1860 aaPredicted RBP10.14□□□□□ -0.79
PCDHGA11-201ENST00000398587 LINC00315P59091 139 aa10.14□□□□□ -0.79
PCDHGA11-201ENST00000398587 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
PCDHGA11-201ENST00000398587 C11orf72Q8NBR9 251 aa10.14□□□□□ -0.79
PCDHGA11-201ENST00000398587 FLNBO75369 2602 aaKnown RBP10.14□□□□□ -0.79
PCDHGA11-201ENST00000398587 MP68P56378 58 aa10.14□□□□□ -0.79
PCDHGA11-201ENST00000398587 ATP5EP2Q5VTU8 51 aa10.13□□□□□ -0.79
PCDHGA11-201ENST00000398587 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA11-201ENST00000398587 LINC01546A6NGU7 62 aa10.13□□□□□ -0.79
PCDHGA11-201ENST00000398587 PRB2P02812 416 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA11-201ENST00000398587 UNQ6190/PRO20217Q6UXQ8 127 aa10.13□□□□□ -0.79
PCDHGA11-201ENST00000398587 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
PCDHGA11-201ENST00000398587 SS18L2Q9UHA2 77 aa10.12□□□□□ -0.79
PCDHGA11-201ENST00000398587 RETNQ9HD89 108 aa10.12□□□□□ -0.79
PCDHGA11-201ENST00000398587 RANBP2P49792 3224 aaKnown RBP10.12□□□□□ -0.79
PCDHGA11-201ENST00000398587 C5orf42Q9H799 3197 aa10.12□□□□□ -0.79
PCDHGA11-201ENST00000398587 UPK3BQ9BT76 320 aa10.11□□□□□ -0.79
PCDHGA11-201ENST00000398587 NDUFV3P56181 108 aaKnown RBP10.11□□□□□ -0.79
PCDHGA11-201ENST00000398587 FHL3Q13643 280 aa10.11□□□□□ -0.79
PCDHGA11-201ENST00000398587 ADAMTSL4-AS1Q5T5F5 129 aa10.11□□□□□ -0.79
PCDHGA11-201ENST00000398587 IGKV2-28A0A075B6P5 120 aa10.1□□□□□ -0.79
PCDHGA11-201ENST00000398587 IGKV2D-28P01615 120 aa10.1□□□□□ -0.79
PCDHGA11-201ENST00000398587 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
PCDHGA11-201ENST00000398587 EGFEM1PQ0D2K5 195 aa10.1□□□□□ -0.79
PCDHGA11-201ENST00000398587 Q6ZTC4 211 aa10.1□□□□□ -0.79
PCDHGA11-201ENST00000398587 TMEM258P61165 79 aa10.09□□□□□ -0.79
PCDHGA11-201ENST00000398587 MUC4Q99102 2169 aa10.09□□□□□ -0.79
PCDHGA11-201ENST00000398587 ZNF73O43830 326 aaPredicted RBP10.09□□□□□ -0.79
PCDHGA11-201ENST00000398587 RPL28P46779 137 aaKnown RBP10.08□□□□□ -0.8
PCDHGA11-201ENST00000398587 FSHBP01225 129 aa10.08□□□□□ -0.8
PCDHGA11-201ENST00000398587 F8P00451 2351 aa10.08□□□□□ -0.8
PCDHGA11-201ENST00000398587 LOC107984640A0A0U1RRK4 108 aa10.08□□□□□ -0.8
PCDHGA11-201ENST00000398587 CCKP06307 115 aa10.08□□□□□ -0.8
PCDHGA11-201ENST00000398587 DHRS4-AS1Q9P1J3 65 aa10.08□□□□□ -0.8
PCDHGA11-201ENST00000398587 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms