RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SPATA3Q8NHX4 192 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 C9orf85Q96MD7 179 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.03□□□□□ -2.08
CHD9-202ENST00000398510 A0A0U1RRA0 63 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 IGKV2-29A2NJV5 120 aaPredicted RBP2.03□□□□□ -2.08
CHD9-202ENST00000398510 UQCRQO14949 82 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 ASPHD1Q5U4P2 390 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 A0A0J9YY99 117 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 BCE1O60756 84 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 IGLV1-51P01701 117 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 KLLNB2CW77 178 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 CCKP06307 115 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 BLCAPP62952 87 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 C5orf38Q86SI9 138 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 NDUFC2-KCTD14E9PQ53 114 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 M0QXV9 152 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 FOXI1Q12951 378 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 TACC2O95359 2948 aa2.03□□□□□ -2.08
CHD9-202ENST00000398510 LY6LH3BQJ8 138 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 LY6G6CO95867 125 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 FAM19A1Q7Z5A9 133 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 MIR7-3HGQ8N6C7 128 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 IGHV4-28A0A0C4DH34 117 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 GAGE12HA6NDE8 117 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 IGHV3-30P01768 117 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 IGHV3-33P01772 117 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 IGHV3-30-3P0DP02 117 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 IGHV3-30-5P0DP03 117 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 DEFB105AQ8NG35 78 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 LINC01006Q8NI28 216 aa2.03□□□□□ -2.09
CHD9-202ENST00000398510 IGHV4-4A0A075B6R2 117 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 LY6HO94772 140 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 LMO4P61968 165 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 C3orf22Q8N5N4 141 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 TNRC18O15417 2968 aaPredicted RBP2.02□□□□□ -2.09
CHD9-202ENST00000398510 ZFP36P26651 326 aaKnown RBP2.02□□□□□ -2.09
CHD9-202ENST00000398510 WFDC11Q8NEX6 87 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 C1orf147Q96MC9 270 aaPredicted RBP2.02□□□□□ -2.09
CHD9-202ENST00000398510 PRO3102Q9H379 93 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 LST1O00453 97 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 FOXL2P58012 376 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 ZNF625Q96I27 306 aaPredicted RBP2.02□□□□□ -2.09
CHD9-202ENST00000398510 IGKV2-24A0A0C4DH68 120 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 TRBV6-5A0A0K0K1A5 114 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 TEX49A0A1B0GTD5 131 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 C11orf53Q8IXP5 236 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 CXCL6P80162 114 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 DAND5Q8N907 189 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 LINC00336Q6ZUF6 198 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 Q6ZVQ6 151 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 NEXN-AS1Q8NBZ9 246 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 CLEC2BQ92478 149 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 WWC2-AS2Q96NR7 200 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 PPDPFQ9H3Y8 114 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 UTP20O75691 2785 aaKnown RBP2.02□□□□□ -2.09
CHD9-202ENST00000398510 PRAC2D3DTV9 90 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 DMBT1Q9UGM3 2413 aaPredicted RBP2.02□□□□□ -2.09
CHD9-202ENST00000398510 A0A0G2JRQ6 117 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 H3BPC8 53 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 CYYR1Q96J86 154 aa2.02□□□□□ -2.09
CHD9-202ENST00000398510 A0A096LPF7 62 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 GNRH2O43555 120 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 KIAA0087Q14695 138 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 C12orf74Q32Q52 190 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 MAST4O15021 2626 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 FLNAP21333 2647 aaKnown RBP2.01□□□□□ -2.09
CHD9-202ENST00000398510 hDV103S1A0JD37 113 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 COLCA2A8K830 154 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 C11orf1Q9H5F2 150 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 ZNF702PQ9H963 129 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 A0A0J9YWU9 116 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 FAM236AA0A1B0GUQ0 79 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 FAM236BA0A1B0GV22 79 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 IGLL1P15814 213 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 M0QY20 66 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 USP9YO00507 2555 aaPredicted RBP2.01□□□□□ -2.09
CHD9-202ENST00000398510 PRB1P04280 392 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 PCP2Q8IVA1 136 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 SPENQ96T58 3664 aaKnown RBP2.01□□□□□ -2.09
CHD9-202ENST00000398510 Q6ZUT4 128 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 PLAC8L1A1L4L8 177 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 LRCOL1A6NCL2 159 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 SMKR1H3BMG3 65 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 POM121L12Q8N7R1 296 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 HELZ2Q9BYK8 2649 aaKnown RBP2.01□□□□□ -2.09
CHD9-202ENST00000398510 NOTCH1P46531 2555 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 Q6ZSV7 163 aa2.01□□□□□ -2.09
CHD9-202ENST00000398510 MDKP21741 143 aaPredicted RBP2□□□□□ -2.09
CHD9-202ENST00000398510 Q8N6K4 173 aa2□□□□□ -2.09
CHD9-202ENST00000398510 DKK2Q9UBU2 259 aa2□□□□□ -2.09
CHD9-202ENST00000398510 AKAP13Q12802 2813 aa2□□□□□ -2.09
CHD9-202ENST00000398510 C22orf34Q6ZV56 151 aa2□□□□□ -2.09
CHD9-202ENST00000398510 C1orf158Q8N1D5 194 aa2□□□□□ -2.09
CHD9-202ENST00000398510 DCHS2Q6V1P9 2916 aa2□□□□□ -2.09
CHD9-202ENST00000398510 ZNF726P1Q15940 193 aa2□□□□□ -2.09
CHD9-202ENST00000398510 NCR3O14931 201 aa2□□□□□ -2.09
CHD9-202ENST00000398510 MOBPQ13875 183 aa2□□□□□ -2.09
CHD9-202ENST00000398510 LINC01556Q5JQF7 62 aa2□□□□□ -2.09
CHD9-202ENST00000398510 Q6ZRP5 223 aa2□□□□□ -2.09
CHD9-202ENST00000398510 SMG1Q96Q15 3661 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms