RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 UQCRQO14949 82 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 PAX4O43316 350 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 GTSF1Q8WW33 167 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 Q9H3A6 140 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 IL36BQ9NZH7 164 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 ZANQ9Y493 2812 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 TRAV12-2A0A075B6T6 113 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 DEFB131BA0A096LNP1 70 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 CRIP1P50238 77 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 NACAE9PAV3 2078 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 PKD1P98161 4303 aa2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 PLECQ15149 4684 aaKnown RBP2.65□□□□□ -1.99
FNDC3A-202ENST00000398316 LINC01549A6NIU2 74 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 NTN5Q8WTR8 489 aaPredicted RBP2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 LINC00479Q96M42 142 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 TP73-AS1Q9UF72 201 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 ICOSQ9Y6W8 199 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 PRYO14603 147 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 KRTAP10-11P60412 298 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 C10orf99Q6UWK7 81 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 X6R8D5 127 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 IZUMO1RA6ND01 250 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 USP17L23D6RBM5 183 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 F2Z2F3 143 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 RPL23P62829 140 aaKnown RBP2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 UPK3BQ9BT76 320 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 LAMTOR3Q9UHA4 124 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 AGRNO00468 2067 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 LYRM9A8MSI8 78 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 H7C423 109 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 NUPR1O60356 82 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 LINC00158P58513 81 aa2.64□□□□□ -1.99
FNDC3A-202ENST00000398316 CKS2P33552 79 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 FUSP35637 526 aaKnown RBP eCLIP2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 HBBP68871 147 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 Q8NAQ8 132 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 GNB1LQ9BYB4 327 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 TRAV4A0A0B4J268 109 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 HLA-DMBP28068 263 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 RNASE4P34096 147 aaKnown RBP2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 C18orf65Q6ZTR6 163 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 CHAC1Q9BUX1 264 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 IGHV3-16A0A0C4DH30 117 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 RPL18AQ02543 176 aaKnown RBP2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 AGPAT4-IT1Q9H0P7 198 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 IGHV3-48P01763 117 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 IGKCP01834 107 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 IGHV4-30-4P0DP06 118 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 SOSTDC1Q6X4U4 206 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 TMEM61Q8N0U2 210 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 CSMD3Q7Z407 3707 aa2.63□□□□□ -1.99
FNDC3A-202ENST00000398316 DNAH11Q96DT5 4516 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 TRAV8-3A0A0A6YYJ7 113 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 NANOS2P60321 138 aaKnown RBP2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 NEGR1Q7Z3B1 354 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 PRNTQ86SH4 94 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 C16orf74Q96GX8 76 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 TIMM21Q9BVV7 248 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 Q9HAA7 133 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 ZNF706Q9Y5V0 76 aaPredicted RBP2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 SMIM26A0A096LP01 95 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 SYS1-DBNDD2H3BUS1 97 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 ATOX1O00244 68 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 CD164Q04900 197 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 C1orf158Q8N1D5 194 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 IGLV2-18A0A075B6J9 118 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 LOC100131303A0A0U1RQF7 123 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 J3QQQ9 107 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 UBE2D2P62837 147 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 TMEM263Q8WUH6 116 aaKnown RBP2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 ETDCA0A1B0GVM5 59 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 CXCL5P42830 114 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 FXYD7P58549 80 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 ERCC8Q13216 396 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 SBSPONQ8IVN8 264 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 C18orf32Q8TCD1 76 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 CHCHD7Q9BUK0 85 aa2.62□□□□□ -1.99
FNDC3A-202ENST00000398316 RNASE3P12724 160 aaKnown RBP2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 SPATA12Q7Z6I5 190 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 TRBV10-1A0A0K0K1A3 114 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 GATA1P15976 413 aaPredicted RBP2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 IFI27P40305 119 aaPredicted RBP2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 Q0VG73 95 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 RHOHQ15669 191 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 ATXN8Q156A1 80 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 C1orf134Q5TEV5 83 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 DAZ4Q86SG3 579 aaKnown RBP2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 ZNF625Q96I27 306 aaPredicted RBP2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 CARD19Q96LW7 228 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 DAZ3Q9NR90 486 aaKnown RBP2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 STARD9Q9P2P6 4700 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 IGKV3D-20A0A0C4DH25 116 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 IGKV3D-7A0A0C4DH55 119 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 REG3AQ06141 175 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 LINC00336Q6ZUF6 198 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 TEN1Q86WV5 123 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 PYGO1Q9Y3Y4 419 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 COX8AP10176 69 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 KIAA0087Q14695 138 aa2.61□□□□□ -1.99
FNDC3A-202ENST00000398316 PRR9Q5T870 116 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 761.6 ms