RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.11□□□□□ -0.31
CHRFAM7A-202ENST00000397827 LITAFQ99732 161 aa13.11□□□□□ -0.31
CHRFAM7A-202ENST00000397827 C16orf95Q9H693 158 aa13.11□□□□□ -0.31
CHRFAM7A-202ENST00000397827 J3KT08 172 aa13.11□□□□□ -0.31
CHRFAM7A-202ENST00000397827 ADAMTSL4-AS1Q5T5F5 129 aa13.11□□□□□ -0.31
CHRFAM7A-202ENST00000397827 C2orf82Q6UX34 121 aa13.11□□□□□ -0.31
CHRFAM7A-202ENST00000397827 PRSS2P07478 247 aa13.1□□□□□ -0.31
CHRFAM7A-202ENST00000397827 K7EQD1 137 aa13.1□□□□□ -0.31
CHRFAM7A-202ENST00000397827 C3orf22Q8N5N4 141 aa13.1□□□□□ -0.31
CHRFAM7A-202ENST00000397827 TRBV7-7A0A0K0K1E9 115 aa13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 NTM-AS1Q6ZSK4 140 aa13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 PLA2G2AP14555 144 aa13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 NPC2P61916 151 aa13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 RPL36AP83881 106 aaKnown RBP13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 COX6A2Q02221 97 aa13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 RPL36ALQ969Q0 106 aaKnown RBP13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 TMEM101Q96IK0 257 aa13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 SMR3AQ99954 134 aa13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 HIVEP2P31629 2446 aa13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 IGLV1-51P01701 117 aa13.09□□□□□ -0.31
CHRFAM7A-202ENST00000397827 C19orf73Q9NVV2 129 aa13.08□□□□□ -0.32
CHRFAM7A-202ENST00000397827 WIPF1O43516 503 aa13.07□□□□□ -0.32
CHRFAM7A-202ENST00000397827 PLAC8L1A1L4L8 177 aa13.07□□□□□ -0.32
CHRFAM7A-202ENST00000397827 NOTCH2Q04721 2471 aa13.06□□□□□ -0.32
CHRFAM7A-202ENST00000397827 A0A0B4J2C4 111 aa13.06□□□□□ -0.32
CHRFAM7A-202ENST00000397827 TRBV10-1A0A0K0K1A3 114 aa13.05□□□□□ -0.32
CHRFAM7A-202ENST00000397827 J3QKU1 62 aa13.05□□□□□ -0.32
CHRFAM7A-202ENST00000397827 TRGV2A0A075B6R0 118 aa13.05□□□□□ -0.32
CHRFAM7A-202ENST00000397827 FN1P02751 2386 aaKnown RBP13.05□□□□□ -0.32
CHRFAM7A-202ENST00000397827 TRAV13-1A0A0B4J241 112 aa13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 LOC100131303A0A0U1RQF7 123 aa13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 UQCRQO14949 82 aa13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 HILS1P60008 231 aa13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 LINC00242Q5T6M2 205 aa13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 DAND5Q8N907 189 aa13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 H7C423 109 aa13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 DAZ2Q13117 558 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 DAZ4Q86SG3 579 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 LINC01600Q96MT4 127 aa13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 DAZ3Q9NR90 486 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 HECTD1Q9ULT8 2610 aa13.04□□□□□ -0.32
CHRFAM7A-202ENST00000397827 TIRAPP58753 221 aa13.03□□□□□ -0.32
CHRFAM7A-202ENST00000397827 TRIAP1O43715 76 aa13.03□□□□□ -0.32
CHRFAM7A-202ENST00000397827 OR13C6PQ8NH95 151 aa13.03□□□□□ -0.32
CHRFAM7A-202ENST00000397827 C16orf74Q96GX8 76 aa13.03□□□□□ -0.32
CHRFAM7A-202ENST00000397827 IGLV5-45A0A087WSX0 123 aa13.03□□□□□ -0.32
CHRFAM7A-202ENST00000397827 FAM240AA0A1B0GVK7 77 aa13.03□□□□□ -0.32
CHRFAM7A-202ENST00000397827 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-202ENST00000397827 CSNK1G2-AS1Q8NCQ2 148 aa13.03□□□□□ -0.32
CHRFAM7A-202ENST00000397827 A0A1B0GX51 115 aa13.02□□□□□ -0.32
CHRFAM7A-202ENST00000397827 LINC00526Q96FQ7 95 aa13.02□□□□□ -0.32
CHRFAM7A-202ENST00000397827 KMT2BQ9UMN6 2715 aaPredicted RBP13.02□□□□□ -0.33
CHRFAM7A-202ENST00000397827 MIAQ16674 131 aa13.02□□□□□ -0.33
CHRFAM7A-202ENST00000397827 SPANXDQ9BXN6 97 aa13.02□□□□□ -0.33
CHRFAM7A-202ENST00000397827 SPANXCQ9NY87 97 aa13.02□□□□□ -0.33
CHRFAM7A-202ENST00000397827 ZNF625Q96I27 306 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-202ENST00000397827 GCN1Q92616 2671 aaKnown RBP13□□□□□ -0.33
CHRFAM7A-202ENST00000397827 KRTAP10-3P60369 221 aa13□□□□□ -0.33
CHRFAM7A-202ENST00000397827 CDC42SE2Q9NRR3 84 aa12.99□□□□□ -0.33
CHRFAM7A-202ENST00000397827 VWFP04275 2813 aa12.99□□□□□ -0.33
CHRFAM7A-202ENST00000397827 NBEAL2Q6ZNJ1 2754 aa12.99□□□□□ -0.33
CHRFAM7A-202ENST00000397827 A0A0U1RRA0 63 aa12.99□□□□□ -0.33
CHRFAM7A-202ENST00000397827 TRBV30A0A0K0K1B3 111 aa12.98□□□□□ -0.33
CHRFAM7A-202ENST00000397827 GAGE2AQ6NT46 116 aa12.98□□□□□ -0.33
CHRFAM7A-202ENST00000397827 Q9H8V8 135 aa12.98□□□□□ -0.33
CHRFAM7A-202ENST00000397827 NDUFA1O15239 70 aa12.98□□□□□ -0.33
CHRFAM7A-202ENST00000397827 TRGV4A0A0C4DH28 118 aa12.98□□□□□ -0.33
CHRFAM7A-202ENST00000397827 H3BT86 120 aa12.98□□□□□ -0.33
CHRFAM7A-202ENST00000397827 IMUPQ9GZP8 106 aa12.98□□□□□ -0.33
CHRFAM7A-202ENST00000397827 UBE2L6O14933 153 aa12.97□□□□□ -0.33
CHRFAM7A-202ENST00000397827 IGLV5-39A0A0G2JS06 123 aa12.97□□□□□ -0.33
CHRFAM7A-202ENST00000397827 SMIM1B2RUZ4 78 aa12.97□□□□□ -0.33
CHRFAM7A-202ENST00000397827 TMEM243Q9BU79 118 aa12.96□□□□□ -0.33
CHRFAM7A-202ENST00000397827 CLEC2BQ92478 149 aa12.96□□□□□ -0.34
CHRFAM7A-202ENST00000397827 OVOL2Q9BRP0 275 aa12.96□□□□□ -0.34
CHRFAM7A-202ENST00000397827 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
CHRFAM7A-202ENST00000397827 PF4P02776 101 aa12.95□□□□□ -0.34
CHRFAM7A-202ENST00000397827 RPS28P62857 69 aaKnown RBP12.95□□□□□ -0.34
CHRFAM7A-202ENST00000397827 DEFB121Q5J5C9 76 aa12.95□□□□□ -0.34
CHRFAM7A-202ENST00000397827 ICOSQ9Y6W8 199 aa12.94□□□□□ -0.34
CHRFAM7A-202ENST00000397827 FAM19A3Q7Z5A8 133 aa12.93□□□□□ -0.34
CHRFAM7A-202ENST00000397827 OTOGQ6ZRI0 2925 aa12.93□□□□□ -0.34
CHRFAM7A-202ENST00000397827 IGKV3OR2-268A0A0C4DH90 116 aa12.93□□□□□ -0.34
CHRFAM7A-202ENST00000397827 F5H768 121 aa12.93□□□□□ -0.34
CHRFAM7A-202ENST00000397827 TIMM17BO60830 172 aa12.93□□□□□ -0.34
CHRFAM7A-202ENST00000397827 COX7CP15954 63 aa12.93□□□□□ -0.34
CHRFAM7A-202ENST00000397827 FHL2Q14192 279 aa12.93□□□□□ -0.34
CHRFAM7A-202ENST00000397827 DEFB130BP0DP73 79 aa12.92□□□□□ -0.34
CHRFAM7A-202ENST00000397827 DEFB130AP0DP74 79 aa12.92□□□□□ -0.34
CHRFAM7A-202ENST00000397827 SMCR5Q8TEV8 140 aa12.92□□□□□ -0.34
CHRFAM7A-202ENST00000397827 CIRBPQ14011 172 aaKnown RBP12.92□□□□□ -0.34
CHRFAM7A-202ENST00000397827 hADV29S1A0JD25 119 aa12.92□□□□□ -0.34
CHRFAM7A-202ENST00000397827 COX6CP09669 75 aa12.92□□□□□ -0.34
CHRFAM7A-202ENST00000397827 PRIMA1Q86XR5 153 aa12.91□□□□□ -0.34
CHRFAM7A-202ENST00000397827 SPATA3Q8NHX4 192 aa12.91□□□□□ -0.34
CHRFAM7A-202ENST00000397827 LY6G6DO95868 133 aa12.9□□□□□ -0.34
CHRFAM7A-202ENST00000397827 KIR2DL5BQ8NHK3 375 aa12.9□□□□□ -0.34
CHRFAM7A-202ENST00000397827 LINC00482Q8N8I6 264 aa12.9□□□□□ -0.34
CHRFAM7A-202ENST00000397827 LINC00308Q8TCZ7 52 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms