RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 SMIM1B2RUZ4 78 aa6.58□□□□□ -1.36
CAPN3-206ENST00000397163 HIST1H4AP62805 103 aaKnown RBP6.57□□□□□ -1.36
CAPN3-206ENST00000397163 RPL18AQ02543 176 aaKnown RBP6.57□□□□□ -1.36
CAPN3-206ENST00000397163 DNAL4O96015 105 aa6.57□□□□□ -1.36
CAPN3-206ENST00000397163 C11orf72Q8NBR9 251 aa6.57□□□□□ -1.36
CAPN3-206ENST00000397163 UBE2E2Q96LR5 201 aa6.57□□□□□ -1.36
CAPN3-206ENST00000397163 USP9YO00507 2555 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-206ENST00000397163 WIPF1O43516 503 aa6.56□□□□□ -1.36
CAPN3-206ENST00000397163 INSP01308 110 aa6.56□□□□□ -1.36
CAPN3-206ENST00000397163 HILS1P60008 231 aa6.56□□□□□ -1.36
CAPN3-206ENST00000397163 C18orf65Q6ZTR6 163 aa6.56□□□□□ -1.36
CAPN3-206ENST00000397163 ATP5G1P05496 136 aa6.56□□□□□ -1.36
CAPN3-206ENST00000397163 BEAN1Q3B7T3 259 aa6.56□□□□□ -1.36
CAPN3-206ENST00000397163 C2CD3Q4AC94 2353 aa6.56□□□□□ -1.36
CAPN3-206ENST00000397163 TRGV1A0A0A0MS02 117 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 INAFM2P0DMQ5 153 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 CXCL5P42830 114 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 TMEM258P61165 79 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 RPS28P62857 69 aaKnown RBP6.55□□□□□ -1.36
CAPN3-206ENST00000397163 FHL2Q14192 279 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 DYNLRB2Q8TF09 96 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 LINC00846Q9NV44 126 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 XCL2Q9UBD3 114 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 A8MTW9 85 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 KHDC1LQ5JSQ8 128 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 MAP6D1Q9H9H5 199 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 CRPP02741 224 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 RPL36AP83881 106 aaKnown RBP6.55□□□□□ -1.36
CAPN3-206ENST00000397163 LINC01561Q8N1V8 128 aa6.55□□□□□ -1.36
CAPN3-206ENST00000397163 RPL36ALQ969Q0 106 aaKnown RBP6.55□□□□□ -1.36
CAPN3-206ENST00000397163 USP17L23D6RBM5 183 aa6.54□□□□□ -1.36
CAPN3-206ENST00000397163 HIST2H2BCQ6DN03 193 aa6.54□□□□□ -1.36
CAPN3-206ENST00000397163 HIST2H2BDQ6DRA6 164 aa6.54□□□□□ -1.36
CAPN3-206ENST00000397163 SERP2Q8N6R1 65 aa6.54□□□□□ -1.36
CAPN3-206ENST00000397163 UPK3BQ9BT76 320 aa6.54□□□□□ -1.36
CAPN3-206ENST00000397163 MALP21145 153 aa6.54□□□□□ -1.36
CAPN3-206ENST00000397163 TRAV13-2A0A0B4J235 113 aa6.54□□□□□ -1.36
CAPN3-206ENST00000397163 FAM222AQ5U5X8 452 aa6.54□□□□□ -1.36
CAPN3-206ENST00000397163 GCN1Q92616 2671 aaKnown RBP6.53□□□□□ -1.36
CAPN3-206ENST00000397163 TRAV23DV6A0A075B6W5 121 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 A0A087WYN8 130 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 NCR3O14931 201 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 SLPIP03973 132 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 MAPK1IP1LQ8NDC0 245 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 ZNF702PQ9H963 129 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 TOMM7Q9P0U1 55 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 PKIGQ9Y2B9 76 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 NOTCH3Q9UM47 2321 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 UBE2L6O14933 153 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 NTM-AS1Q6ZSK4 140 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 CDC42SE2Q9NRR3 84 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 NOTCH2Q04721 2471 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 PTPN13Q12923 2485 aa6.53□□□□□ -1.36
CAPN3-206ENST00000397163 MIR7-3HGQ8N6C7 128 aa6.52□□□□□ -1.37
CAPN3-206ENST00000397163 C1orf43Q9BWL3 253 aa6.52□□□□□ -1.37
CAPN3-206ENST00000397163 IGKV3OR2-268A0A0C4DH90 116 aa6.52□□□□□ -1.37
CAPN3-206ENST00000397163 K7EQD1 137 aa6.52□□□□□ -1.37
CAPN3-206ENST00000397163 LINC01356Q8N9X3 169 aa6.52□□□□□ -1.37
CAPN3-206ENST00000397163 RPL28P46779 137 aaKnown RBP6.52□□□□□ -1.37
CAPN3-206ENST00000397163 FAM19A3Q7Z5A8 133 aa6.52□□□□□ -1.37
CAPN3-206ENST00000397163 Q96MF0 132 aa6.52□□□□□ -1.37
CAPN3-206ENST00000397163 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
CAPN3-206ENST00000397163 PF4P02776 101 aa6.51□□□□□ -1.37
CAPN3-206ENST00000397163 LINC00158P58513 81 aa6.51□□□□□ -1.37
CAPN3-206ENST00000397163 TENM4Q6N022 2769 aa6.51□□□□□ -1.37
CAPN3-206ENST00000397163 Q6ZTI0 123 aa6.51□□□□□ -1.37
CAPN3-206ENST00000397163 LINC00336Q6ZUF6 198 aa6.51□□□□□ -1.37
CAPN3-206ENST00000397163 C20orf197Q8N268 126 aa6.51□□□□□ -1.37
CAPN3-206ENST00000397163 LINC00337Q8N6G1 96 aa6.51□□□□□ -1.37
CAPN3-206ENST00000397163 TRBV10-1A0A0K0K1A3 114 aa6.5□□□□□ -1.37
CAPN3-206ENST00000397163 TMEM243Q9BU79 118 aa6.5□□□□□ -1.37
CAPN3-206ENST00000397163 PFN2P35080 140 aa6.5□□□□□ -1.37
CAPN3-206ENST00000397163 STHQ8IWL8 128 aa6.5□□□□□ -1.37
CAPN3-206ENST00000397163 COX7B2Q8TF08 81 aa6.5□□□□□ -1.37
CAPN3-206ENST00000397163 OVOL2Q9BRP0 275 aa6.5□□□□□ -1.37
CAPN3-206ENST00000397163 GHRHP01286 108 aa6.5□□□□□ -1.37
CAPN3-206ENST00000397163 DEFB114Q30KQ6 69 aa6.5□□□□□ -1.37
CAPN3-206ENST00000397163 WFDC11Q8NEX6 87 aa6.5□□□□□ -1.37
CAPN3-206ENST00000397163 SMIM11BQ8TCY0 68 aa6.5□□□□□ -1.37
CAPN3-206ENST00000397163 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
CAPN3-206ENST00000397163 CENPEQ02224 2701 aa6.49□□□□□ -1.37
CAPN3-206ENST00000397163 IGKV2-28A0A075B6P5 120 aa6.49□□□□□ -1.37
CAPN3-206ENST00000397163 IGKV2D-28P01615 120 aa6.49□□□□□ -1.37
CAPN3-206ENST00000397163 FAM19A1Q7Z5A9 133 aa6.49□□□□□ -1.37
CAPN3-206ENST00000397163 RPL35AP18077 110 aaKnown RBP6.48□□□□□ -1.37
CAPN3-206ENST00000397163 LECT2O14960 151 aa6.48□□□□□ -1.37
CAPN3-206ENST00000397163 DSCR9P59020 149 aa6.48□□□□□ -1.37
CAPN3-206ENST00000397163 Q6YL49 198 aa6.48□□□□□ -1.37
CAPN3-206ENST00000397163 J3QLI3 93 aa6.48□□□□□ -1.37
CAPN3-206ENST00000397163 ODF3L2Q3SX64 289 aa6.48□□□□□ -1.37
CAPN3-206ENST00000397163 NOP10Q9NPE3 64 aaKnown RBP6.48□□□□□ -1.37
CAPN3-206ENST00000397163 UTP20O75691 2785 aaKnown RBP6.47□□□□□ -1.37
CAPN3-206ENST00000397163 H0YGX0 51 aa6.47□□□□□ -1.37
CAPN3-206ENST00000397163 PAX4O43316 350 aa6.47□□□□□ -1.37
CAPN3-206ENST00000397163 RNASE1P07998 156 aaKnown RBP6.47□□□□□ -1.37
CAPN3-206ENST00000397163 CCL18P55774 89 aa6.47□□□□□ -1.37
CAPN3-206ENST00000397163 Q6JHZ5 121 aa6.47□□□□□ -1.37
CAPN3-206ENST00000397163 HECTD1Q9ULT8 2610 aa6.47□□□□□ -1.37
CAPN3-206ENST00000397163 ENHOQ6UWT2 76 aa6.46□□□□□ -1.37
CAPN3-206ENST00000397163 C4orf3Q8WVX3 66 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms