RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 C15orf53Q8NAA6 179 aa11.93□□□□□ -0.5
HLA-A-204ENST00000396634 ICOSQ9Y6W8 199 aa11.93□□□□□ -0.5
HLA-A-204ENST00000396634 PRADC1Q9BSG0 188 aa11.92□□□□□ -0.5
HLA-A-204ENST00000396634 ALMS1Q8TCU4 4167 aa11.92□□□□□ -0.5
HLA-A-204ENST00000396634 DNAH1Q9P2D7 4330 aa11.92□□□□□ -0.5
HLA-A-204ENST00000396634 DEFB104AQ8WTQ1 72 aa11.91□□□□□ -0.5
HLA-A-204ENST00000396634 LINC01549A6NIU2 74 aa11.91□□□□□ -0.5
HLA-A-204ENST00000396634 LY6G6CO95867 125 aa11.91□□□□□ -0.5
HLA-A-204ENST00000396634 PSMB2P49721 201 aa11.91□□□□□ -0.5
HLA-A-204ENST00000396634 SS18L2Q9UHA2 77 aa11.91□□□□□ -0.5
HLA-A-204ENST00000396634 VPS13DQ5THJ4 4388 aa11.9□□□□□ -0.5
HLA-A-204ENST00000396634 H3BNG1 76 aa11.9□□□□□ -0.5
HLA-A-204ENST00000396634 ESRGQ1W209 222 aa11.9□□□□□ -0.5
HLA-A-204ENST00000396634 ORMDL2Q53FV1 153 aa11.9□□□□□ -0.5
HLA-A-204ENST00000396634 NEXN-AS1Q8NBZ9 246 aa11.9□□□□□ -0.5
HLA-A-204ENST00000396634 ZNRF2Q8NHG8 242 aa11.9□□□□□ -0.5
HLA-A-204ENST00000396634 HYDINQ4G0P3 5121 aa11.9□□□□□ -0.5
HLA-A-204ENST00000396634 SACSQ9NZJ4 4579 aa11.9□□□□□ -0.5
HLA-A-204ENST00000396634 PRSS29PA6NIE9 313 aa11.89□□□□□ -0.51
HLA-A-204ENST00000396634 M0QY20 66 aa11.89□□□□□ -0.51
HLA-A-204ENST00000396634 MRPL23Q16540 153 aaKnown RBP11.89□□□□□ -0.51
HLA-A-204ENST00000396634 LINC00476Q8WZB0 136 aa11.89□□□□□ -0.51
HLA-A-204ENST00000396634 RPL39LQ96EH5 51 aaKnown RBP11.89□□□□□ -0.51
HLA-A-204ENST00000396634 KMT2AQ03164 3969 aa11.89□□□□□ -0.51
HLA-A-204ENST00000396634 IGHV3-38A0A0C4DH36 116 aa11.89□□□□□ -0.51
HLA-A-204ENST00000396634 GAGE2BQ13066 116 aa11.89□□□□□ -0.51
HLA-A-204ENST00000396634 GAGE2EQ4V326 116 aa11.89□□□□□ -0.51
HLA-A-204ENST00000396634 PAPPA-AS1Q5QFB9 102 aa11.89□□□□□ -0.51
HLA-A-204ENST00000396634 CARD19Q96LW7 228 aa11.89□□□□□ -0.51
HLA-A-204ENST00000396634 GAGE2DQ9UEU5 116 aa11.89□□□□□ -0.51
HLA-A-204ENST00000396634 LINC00588Q9Y4M8 146 aa11.88□□□□□ -0.51
HLA-A-204ENST00000396634 SNCGO76070 127 aa11.87□□□□□ -0.51
HLA-A-204ENST00000396634 SCGB1C2P0DMR2 95 aa11.87□□□□□ -0.51
HLA-A-204ENST00000396634 UBE2DNLQ8IWF7 75 aa11.87□□□□□ -0.51
HLA-A-204ENST00000396634 LINC01600Q96MT4 127 aa11.87□□□□□ -0.51
HLA-A-204ENST00000396634 SPANXDQ9BXN6 97 aa11.87□□□□□ -0.51
HLA-A-204ENST00000396634 LOC107984156A0A0G2JMH3 177 aa11.87□□□□□ -0.51
HLA-A-204ENST00000396634 LINC00694P0DN24 101 aa11.87□□□□□ -0.51
HLA-A-204ENST00000396634 ARL17AQ8IVW1 177 aa11.87□□□□□ -0.51
HLA-A-204ENST00000396634 B5MCH6 92 aa11.85□□□□□ -0.51
HLA-A-204ENST00000396634 NDUFV3P56181 108 aaKnown RBP11.85□□□□□ -0.51
HLA-A-204ENST00000396634 SRSF9Q13242 221 aaKnown RBP eCLIP11.85□□□□□ -0.51
HLA-A-204ENST00000396634 TTC32Q5I0X7 151 aa11.85□□□□□ -0.51
HLA-A-204ENST00000396634 LYPD5Q6UWN5 251 aa11.85□□□□□ -0.51
HLA-A-204ENST00000396634 IFITM1P13164 125 aa11.85□□□□□ -0.51
HLA-A-204ENST00000396634 HERVK_113P61574 105 aa11.85□□□□□ -0.51
HLA-A-204ENST00000396634 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
HLA-A-204ENST00000396634 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
HLA-A-204ENST00000396634 SCGB1D4Q6XE38 83 aa11.84□□□□□ -0.51
HLA-A-204ENST00000396634 NRACQ8N912 160 aa11.84□□□□□ -0.51
HLA-A-204ENST00000396634 TOMM6Q96B49 74 aa11.84□□□□□ -0.51
HLA-A-204ENST00000396634 TRBV10-1A0A0K0K1A3 114 aa11.83□□□□□ -0.52
HLA-A-204ENST00000396634 LCE6AA0A183 80 aa11.83□□□□□ -0.52
HLA-A-204ENST00000396634 ZNF815PA8K554 130 aa11.83□□□□□ -0.52
HLA-A-204ENST00000396634 CCL18P55774 89 aa11.83□□□□□ -0.52
HLA-A-204ENST00000396634 PPP1R17O96001 155 aa11.82□□□□□ -0.52
HLA-A-204ENST00000396634 C10orf126Q8N4M7 172 aa11.82□□□□□ -0.52
HLA-A-204ENST00000396634 ANKRD29Q8N6D5 301 aa11.82□□□□□ -0.52
HLA-A-204ENST00000396634 SCGB3A1Q96QR1 104 aa11.82□□□□□ -0.52
HLA-A-204ENST00000396634 TNFRSF18Q9Y5U5 241 aa11.82□□□□□ -0.52
HLA-A-204ENST00000396634 RYR2Q92736 4967 aa11.81□□□□□ -0.52
HLA-A-204ENST00000396634 TCL1BO95988 128 aa11.81□□□□□ -0.52
HLA-A-204ENST00000396634 WFDC10BQ8IUB3 73 aa11.81□□□□□ -0.52
HLA-A-204ENST00000396634 SMIM2Q9BVW6 85 aa11.81□□□□□ -0.52
HLA-A-204ENST00000396634 RYR3Q15413 4870 aa11.81□□□□□ -0.52
HLA-A-204ENST00000396634 RPL32P62910 135 aaKnown RBP11.8□□□□□ -0.52
HLA-A-204ENST00000396634 Q8N3U1 123 aa11.8□□□□□ -0.52
HLA-A-204ENST00000396634 TMEM126AQ9H061 195 aa11.8□□□□□ -0.52
HLA-A-204ENST00000396634 SLC25A20O43772 301 aa11.79□□□□□ -0.52
HLA-A-204ENST00000396634 PRO1854Q9UHT4 67 aa11.79□□□□□ -0.52
HLA-A-204ENST00000396634 M0R2N4 97 aa11.78□□□□□ -0.52
HLA-A-204ENST00000396634 RPL13AP40429 203 aaKnown RBP11.78□□□□□ -0.52
HLA-A-204ENST00000396634 NTM-AS1Q6ZSK4 140 aa11.78□□□□□ -0.52
HLA-A-204ENST00000396634 SDHAF1A6NFY7 115 aa11.77□□□□□ -0.53
HLA-A-204ENST00000396634 HERV-K104P63124 156 aa11.77□□□□□ -0.53
HLA-A-204ENST00000396634 DNAJC30Q96LL9 226 aa11.76□□□□□ -0.53
HLA-A-204ENST00000396634 Q9H8V8 135 aa11.76□□□□□ -0.53
HLA-A-204ENST00000396634 SPANXCQ9NY87 97 aa11.76□□□□□ -0.53
HLA-A-204ENST00000396634 SUMO2P61956 95 aaKnown RBP11.74□□□□□ -0.53
HLA-A-204ENST00000396634 ATXN8Q156A1 80 aa11.74□□□□□ -0.53
HLA-A-204ENST00000396634 LELP1Q5T871 98 aa11.74□□□□□ -0.53
HLA-A-204ENST00000396634 BAALCQ8WXS3 180 aa11.74□□□□□ -0.53
HLA-A-204ENST00000396634 KRTAP1-5Q9BYS1 174 aa11.74□□□□□ -0.53
HLA-A-204ENST00000396634 A0A0B4J2C4 111 aa11.74□□□□□ -0.53
HLA-A-204ENST00000396634 IGHV3-30P01768 117 aa11.74□□□□□ -0.53
HLA-A-204ENST00000396634 IGHV3-30-5P0DP03 117 aa11.74□□□□□ -0.53
HLA-A-204ENST00000396634 DAZ4Q86SG3 579 aaKnown RBP11.74□□□□□ -0.53
HLA-A-204ENST00000396634 UPK3BQ9BT76 320 aa11.74□□□□□ -0.53
HLA-A-204ENST00000396634 DAZ3Q9NR90 486 aaKnown RBP11.74□□□□□ -0.53
HLA-A-204ENST00000396634 TRBV6-8A0A0A6YYG3 113 aa11.73□□□□□ -0.53
HLA-A-204ENST00000396634 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.73□□□□□ -0.53
HLA-A-204ENST00000396634 TRAV8-4A0A0B4J246 113 aa11.73□□□□□ -0.53
HLA-A-204ENST00000396634 FAM240AA0A1B0GVK7 77 aa11.73□□□□□ -0.53
HLA-A-204ENST00000396634 CFC1BP0CG36 223 aa11.73□□□□□ -0.53
HLA-A-204ENST00000396634 CFC1P0CG37 223 aa11.73□□□□□ -0.53
HLA-A-204ENST00000396634 SMIM20Q8N5G0 67 aa11.73□□□□□ -0.53
HLA-A-204ENST00000396634 TRBV6-5A0A0K0K1A5 114 aa11.72□□□□□ -0.53
HLA-A-204ENST00000396634 IGHV3-33P01772 117 aa11.72□□□□□ -0.53
HLA-A-204ENST00000396634 IGHV3-30-3P0DP02 117 aa11.72□□□□□ -0.53
HLA-A-204ENST00000396634 TIRAPP58753 221 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms