RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 M0R378 163 aa7.73□□□□□ -1.17
COL4A4-201ENST00000396625 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
COL4A4-201ENST00000396625 HILS1P60008 231 aa7.73□□□□□ -1.17
COL4A4-201ENST00000396625 LINC00526Q96FQ7 95 aa7.73□□□□□ -1.17
COL4A4-201ENST00000396625 LOC100131303A0A0U1RQF7 123 aa7.72□□□□□ -1.17
COL4A4-201ENST00000396625 IGF1P05019 195 aa7.72□□□□□ -1.17
COL4A4-201ENST00000396625 TRBV6-8A0A0A6YYG3 113 aa7.72□□□□□ -1.17
COL4A4-201ENST00000396625 SYCNQ0VAF6 134 aa7.72□□□□□ -1.17
COL4A4-201ENST00000396625 IGLV2-14P01704 120 aa7.72□□□□□ -1.17
COL4A4-201ENST00000396625 ZNF80P51504 273 aaPredicted RBP7.72□□□□□ -1.17
COL4A4-201ENST00000396625 IGF2RP11717 2491 aa7.72□□□□□ -1.17
COL4A4-201ENST00000396625 U3KQK5 164 aa7.72□□□□□ -1.17
COL4A4-201ENST00000396625 E7EUB6 86 aa7.72□□□□□ -1.17
COL4A4-201ENST00000396625 NRACQ8N912 160 aa7.72□□□□□ -1.17
COL4A4-201ENST00000396625 CCDC140Q96MF4 163 aa7.71□□□□□ -1.17
COL4A4-201ENST00000396625 M0QY20 66 aa7.71□□□□□ -1.18
COL4A4-201ENST00000396625 BEAN1Q3B7T3 259 aa7.71□□□□□ -1.18
COL4A4-201ENST00000396625 LINC00208Q96KT6 92 aa7.71□□□□□ -1.18
COL4A4-201ENST00000396625 SPINK1P00995 79 aa7.7□□□□□ -1.18
COL4A4-201ENST00000396625 KRTAP27-1Q3LI81 207 aa7.7□□□□□ -1.18
COL4A4-201ENST00000396625 PRORYQ9H606 182 aa7.7□□□□□ -1.18
COL4A4-201ENST00000396625 A6NDX4 124 aa7.7□□□□□ -1.18
COL4A4-201ENST00000396625 LINC00322Q6ZN03 302 aaPredicted RBP7.7□□□□□ -1.18
COL4A4-201ENST00000396625 RETNLBQ9BQ08 111 aa7.7□□□□□ -1.18
COL4A4-201ENST00000396625 PLAC8L1A1L4L8 177 aa7.7□□□□□ -1.18
COL4A4-201ENST00000396625 ANKRD11Q6UB99 2663 aaPredicted RBP7.7□□□□□ -1.18
COL4A4-201ENST00000396625 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
COL4A4-201ENST00000396625 ZFP36P26651 326 aaKnown RBP7.7□□□□□ -1.18
COL4A4-201ENST00000396625 CD164L2Q6UWJ8 174 aa7.69□□□□□ -1.18
COL4A4-201ENST00000396625 LINC00474Q9P2X8 69 aa7.69□□□□□ -1.18
COL4A4-201ENST00000396625 C2orf91Q6ZV80 131 aa7.69□□□□□ -1.18
COL4A4-201ENST00000396625 U3KQA8 63 aa7.69□□□□□ -1.18
COL4A4-201ENST00000396625 LTBP2Q14767 1821 aa7.69□□□□□ -1.18
COL4A4-201ENST00000396625 ODF3L1Q8IXM7 274 aa7.69□□□□□ -1.18
COL4A4-201ENST00000396625 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.69□□□□□ -1.18
COL4A4-201ENST00000396625 LOC107984640A0A0U1RRK4 108 aa7.69□□□□□ -1.18
COL4A4-201ENST00000396625 USP24Q9UPU5 2620 aa7.69□□□□□ -1.18
COL4A4-201ENST00000396625 NRGNQ92686 78 aa7.68□□□□□ -1.18
COL4A4-201ENST00000396625 PYGO1Q9Y3Y4 419 aa7.68□□□□□ -1.18
COL4A4-201ENST00000396625 USP9YO00507 2555 aaPredicted RBP7.68□□□□□ -1.18
COL4A4-201ENST00000396625 CIRBP-AS1Q8TBR5 109 aa7.68□□□□□ -1.18
COL4A4-201ENST00000396625 LINC01547P58512 204 aaPredicted RBP7.67□□□□□ -1.18
COL4A4-201ENST00000396625 COL4A4P53420 1690 aaPredicted RBP7.67□□□□□ -1.18
COL4A4-201ENST00000396625 TRBV7-7A0A0K0K1E9 115 aa7.67□□□□□ -1.18
COL4A4-201ENST00000396625 H0Y9P7 68 aa7.66□□□□□ -1.18
COL4A4-201ENST00000396625 IGLV2-8P01709 118 aa7.66□□□□□ -1.18
COL4A4-201ENST00000396625 NTM-AS1Q6ZSK4 140 aa7.66□□□□□ -1.18
COL4A4-201ENST00000396625 PLA2G1BP04054 148 aaKnown RBP7.66□□□□□ -1.18
COL4A4-201ENST00000396625 SPAG11AQ6PDA7 123 aa7.66□□□□□ -1.18
COL4A4-201ENST00000396625 TSHBP01222 138 aa7.65□□□□□ -1.18
COL4A4-201ENST00000396625 Q8N814 137 aa7.65□□□□□ -1.18
COL4A4-201ENST00000396625 MUC7Q8TAX7 377 aa7.65□□□□□ -1.18
COL4A4-201ENST00000396625 PCOTHQ58A44 107 aa7.65□□□□□ -1.19
COL4A4-201ENST00000396625 C1orf137Q5JT78 98 aa7.65□□□□□ -1.19
COL4A4-201ENST00000396625 RNF185Q96GF1 192 aa7.65□□□□□ -1.19
COL4A4-201ENST00000396625 IGLV4-69A0A075B6H9 119 aa7.64□□□□□ -1.19
COL4A4-201ENST00000396625 Q8N7P7 452 aa7.64□□□□□ -1.19
COL4A4-201ENST00000396625 EIF4EBP1Q13541 118 aaPredicted RBP7.64□□□□□ -1.19
COL4A4-201ENST00000396625 CHD8Q9HCK8 2581 aa7.64□□□□□ -1.19
COL4A4-201ENST00000396625 Q6ZSR3 168 aa7.63□□□□□ -1.19
COL4A4-201ENST00000396625 CXCL6P80162 114 aa7.63□□□□□ -1.19
COL4A4-201ENST00000396625 MBD6Q96DN6 1003 aa7.63□□□□□ -1.19
COL4A4-201ENST00000396625 TRBV6-4A0A1B0GX49 114 aa7.63□□□□□ -1.19
COL4A4-201ENST00000396625 IGF2-ASQ6U949 168 aa7.63□□□□□ -1.19
COL4A4-201ENST00000396625 REG3GQ6UW15 175 aa7.63□□□□□ -1.19
COL4A4-201ENST00000396625 PROK1P58294 105 aa7.63□□□□□ -1.19
COL4A4-201ENST00000396625 SBSPONQ8IVN8 264 aa7.63□□□□□ -1.19
COL4A4-201ENST00000396625 ZNF843Q8N446 348 aa7.63□□□□□ -1.19
COL4A4-201ENST00000396625 PRRC2CQ9Y520 2896 aaKnown RBP7.63□□□□□ -1.19
COL4A4-201ENST00000396625 Q8N3U1 123 aa7.63□□□□□ -1.19
COL4A4-201ENST00000396625 IGLV1-47P01700 117 aa7.62□□□□□ -1.19
COL4A4-201ENST00000396625 LIMD2Q9BT23 127 aa7.62□□□□□ -1.19
COL4A4-201ENST00000396625 LINC01548A6NM66 108 aa7.62□□□□□ -1.19
COL4A4-201ENST00000396625 A0A087WVE0 104 aa7.62□□□□□ -1.19
COL4A4-201ENST00000396625 Q6ZS46 218 aa7.62□□□□□ -1.19
COL4A4-201ENST00000396625 RPS28P62857 69 aaKnown RBP7.62□□□□□ -1.19
COL4A4-201ENST00000396625 IGLV2-18A0A075B6J9 118 aa7.61□□□□□ -1.19
COL4A4-201ENST00000396625 C11orf1Q9H5F2 150 aa7.61□□□□□ -1.19
COL4A4-201ENST00000396625 FASNP49327 2511 aaKnown RBP7.61□□□□□ -1.19
COL4A4-201ENST00000396625 M0R2N4 97 aa7.61□□□□□ -1.19
COL4A4-201ENST00000396625 RPL28P46779 137 aaKnown RBP7.61□□□□□ -1.19
COL4A4-201ENST00000396625 DEFB114Q30KQ6 69 aa7.61□□□□□ -1.19
COL4A4-201ENST00000396625 KPRPQ5T749 579 aaPredicted RBP7.61□□□□□ -1.19
COL4A4-201ENST00000396625 TRAV10A0A0B4J240 114 aa7.6□□□□□ -1.19
COL4A4-201ENST00000396625 PRLHP81277 87 aa7.6□□□□□ -1.19
COL4A4-201ENST00000396625 DAZAP2Q15038 168 aaPredicted RBP7.6□□□□□ -1.19
COL4A4-201ENST00000396625 Q8IZM0 81 aa7.6□□□□□ -1.19
COL4A4-201ENST00000396625 K7EQG2 157 aa7.6□□□□□ -1.19
COL4A4-201ENST00000396625 CR1P17927 2039 aa7.6□□□□□ -1.19
COL4A4-201ENST00000396625 BBC3Q96PG8 261 aaPredicted RBP7.6□□□□□ -1.19
COL4A4-201ENST00000396625 A0A087WYN8 130 aa7.6□□□□□ -1.19
COL4A4-201ENST00000396625 HCG22E2RYF7 251 aa7.6□□□□□ -1.19
COL4A4-201ENST00000396625 TMEM254Q8TBM7 123 aa7.59□□□□□ -1.19
COL4A4-201ENST00000396625 LELP1Q5T871 98 aa7.59□□□□□ -1.19
COL4A4-201ENST00000396625 P0C879 139 aa7.59□□□□□ -1.19
COL4A4-201ENST00000396625 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
COL4A4-201ENST00000396625 C7orf65Q6ZTY9 151 aa7.59□□□□□ -1.19
COL4A4-201ENST00000396625 LINC00959A0A1B0GUT2 108 aa7.59□□□□□ -1.2
COL4A4-201ENST00000396625 CRIP1P50238 77 aa7.58□□□□□ -1.2
COL4A4-201ENST00000396625 ODF3BA8MYP8 253 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms