RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 SETD2Q9BYW2 2564 aaPredicted RBP9.53□□□□□ -0.88
TRIM40-207ENST00000396581 INSP01308 110 aa9.52□□□□□ -0.88
TRIM40-207ENST00000396581 TRACP01848 142 aa9.52□□□□□ -0.88
TRIM40-207ENST00000396581 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.88
TRIM40-207ENST00000396581 SMR3AQ99954 134 aa9.52□□□□□ -0.88
TRIM40-207ENST00000396581 PEMTQ9UBM1 199 aa9.52□□□□□ -0.88
TRIM40-207ENST00000396581 C18orf65Q6ZTR6 163 aa9.52□□□□□ -0.89
TRIM40-207ENST00000396581 ANK3Q12955 4377 aaKnown RBP9.51□□□□□ -0.89
TRIM40-207ENST00000396581 F5H768 121 aa9.51□□□□□ -0.89
TRIM40-207ENST00000396581 RNASE1P07998 156 aaKnown RBP9.51□□□□□ -0.89
TRIM40-207ENST00000396581 LINC00694P0DN24 101 aa9.51□□□□□ -0.89
TRIM40-207ENST00000396581 HERV-K104P63124 156 aa9.51□□□□□ -0.89
TRIM40-207ENST00000396581 TRBV10-1A0A0K0K1A3 114 aa9.51□□□□□ -0.89
TRIM40-207ENST00000396581 LY6G6DO95868 133 aa9.5□□□□□ -0.89
TRIM40-207ENST00000396581 HILS1P60008 231 aa9.5□□□□□ -0.89
TRIM40-207ENST00000396581 DEFB136Q30KP8 78 aa9.5□□□□□ -0.89
TRIM40-207ENST00000396581 C22orf24Q9Y442 160 aa9.5□□□□□ -0.89
TRIM40-207ENST00000396581 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
TRIM40-207ENST00000396581 NTM-AS1Q6ZSK4 140 aa9.49□□□□□ -0.89
TRIM40-207ENST00000396581 C4orf3Q8WVX3 66 aa9.49□□□□□ -0.89
TRIM40-207ENST00000396581 HIVEP1P15822 2718 aa9.49□□□□□ -0.89
TRIM40-207ENST00000396581 DAZ2Q13117 558 aaKnown RBP9.49□□□□□ -0.89
TRIM40-207ENST00000396581 DEFB114Q30KQ6 69 aa9.49□□□□□ -0.89
TRIM40-207ENST00000396581 DAZ4Q86SG3 579 aaKnown RBP9.49□□□□□ -0.89
TRIM40-207ENST00000396581 DAZ3Q9NR90 486 aaKnown RBP9.49□□□□□ -0.89
TRIM40-207ENST00000396581 CDC42SE2Q9NRR3 84 aa9.49□□□□□ -0.89
TRIM40-207ENST00000396581 SORL1Q92673 2214 aa9.49□□□□□ -0.89
TRIM40-207ENST00000396581 C16orf95Q9H693 158 aa9.48□□□□□ -0.89
TRIM40-207ENST00000396581 NSD1Q96L73 2696 aaPredicted RBP9.48□□□□□ -0.89
TRIM40-207ENST00000396581 PF4P02776 101 aa9.47□□□□□ -0.89
TRIM40-207ENST00000396581 LINC00643Q86TS7 51 aa9.47□□□□□ -0.89
TRIM40-207ENST00000396581 PRIMA1Q86XR5 153 aa9.47□□□□□ -0.89
TRIM40-207ENST00000396581 C1orf158Q8N1D5 194 aa9.47□□□□□ -0.89
TRIM40-207ENST00000396581 K7EQD1 137 aa9.47□□□□□ -0.89
TRIM40-207ENST00000396581 NDUFA7O95182 113 aa9.47□□□□□ -0.89
TRIM40-207ENST00000396581 RPL36AP83881 106 aaKnown RBP9.47□□□□□ -0.89
TRIM40-207ENST00000396581 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
TRIM40-207ENST00000396581 RPL36ALQ969Q0 106 aaKnown RBP9.47□□□□□ -0.89
TRIM40-207ENST00000396581 MEIG1Q5JSS6 88 aa9.46□□□□□ -0.89
TRIM40-207ENST00000396581 LINC01006Q8NI28 216 aa9.46□□□□□ -0.89
TRIM40-207ENST00000396581 CHCHD5Q9BSY4 110 aa9.46□□□□□ -0.89
TRIM40-207ENST00000396581 RPL28P46779 137 aaKnown RBP9.46□□□□□ -0.9
TRIM40-207ENST00000396581 HIST2H2BDQ6DRA6 164 aa9.46□□□□□ -0.9
TRIM40-207ENST00000396581 DYNLRB2Q8TF09 96 aa9.46□□□□□ -0.9
TRIM40-207ENST00000396581 FAM218AQ96MZ4 157 aa9.46□□□□□ -0.9
TRIM40-207ENST00000396581 TRAV13-1A0A0B4J241 112 aa9.45□□□□□ -0.9
TRIM40-207ENST00000396581 A0A0U1RRA0 63 aa9.45□□□□□ -0.9
TRIM40-207ENST00000396581 BAALC-AS2P0C853 105 aa9.45□□□□□ -0.9
TRIM40-207ENST00000396581 FAM110AQ9BQ89 295 aa9.45□□□□□ -0.9
TRIM40-207ENST00000396581 SETXQ7Z333 2677 aaKnown RBP9.45□□□□□ -0.9
TRIM40-207ENST00000396581 ODF3L2Q3SX64 289 aa9.44□□□□□ -0.9
TRIM40-207ENST00000396581 TRAV13-2A0A0B4J235 113 aa9.44□□□□□ -0.9
TRIM40-207ENST00000396581 XCL2Q9UBD3 114 aa9.44□□□□□ -0.9
TRIM40-207ENST00000396581 FN1P02751 2386 aaKnown RBP9.43□□□□□ -0.9
TRIM40-207ENST00000396581 TRGV1A0A0A0MS02 117 aa9.43□□□□□ -0.9
TRIM40-207ENST00000396581 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
TRIM40-207ENST00000396581 CXCL5P42830 114 aa9.43□□□□□ -0.9
TRIM40-207ENST00000396581 FAM236AA0A1B0GUQ0 79 aa9.43□□□□□ -0.9
TRIM40-207ENST00000396581 FAM236BA0A1B0GV22 79 aa9.43□□□□□ -0.9
TRIM40-207ENST00000396581 ATP5G1P05496 136 aa9.43□□□□□ -0.9
TRIM40-207ENST00000396581 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
TRIM40-207ENST00000396581 C5orf38Q86SI9 138 aa9.43□□□□□ -0.9
TRIM40-207ENST00000396581 TMEM126AQ9H061 195 aa9.43□□□□□ -0.9
TRIM40-207ENST00000396581 INAFM2P0DMQ5 153 aa9.42□□□□□ -0.9
TRIM40-207ENST00000396581 IGKV2-28A0A075B6P5 120 aa9.41□□□□□ -0.9
TRIM40-207ENST00000396581 INAFM1C9JVW0 142 aa9.41□□□□□ -0.9
TRIM40-207ENST00000396581 IGKV2D-28P01615 120 aa9.41□□□□□ -0.9
TRIM40-207ENST00000396581 Q6ZTI0 123 aa9.41□□□□□ -0.9
TRIM40-207ENST00000396581 STHQ8IWL8 128 aa9.41□□□□□ -0.9
TRIM40-207ENST00000396581 OVOL2Q9BRP0 275 aa9.41□□□□□ -0.9
TRIM40-207ENST00000396581 C2CD3Q4AC94 2353 aa9.4□□□□□ -0.9
TRIM40-207ENST00000396581 TMEM243Q9BU79 118 aa9.4□□□□□ -0.9
TRIM40-207ENST00000396581 MALP21145 153 aa9.4□□□□□ -0.91
TRIM40-207ENST00000396581 LINC00337Q8N6G1 96 aa9.4□□□□□ -0.91
TRIM40-207ENST00000396581 WNK1Q9H4A3 2382 aa9.39□□□□□ -0.91
TRIM40-207ENST00000396581 C11orf44Q8N8P7 122 aa9.39□□□□□ -0.91
TRIM40-207ENST00000396581 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
TRIM40-207ENST00000396581 CRPP02741 224 aa9.38□□□□□ -0.91
TRIM40-207ENST00000396581 SMIM20Q8N5G0 67 aa9.38□□□□□ -0.91
TRIM40-207ENST00000396581 OBSCN-AS1Q96MR7 158 aa9.38□□□□□ -0.91
TRIM40-207ENST00000396581 CCL24O00175 119 aa9.38□□□□□ -0.91
TRIM40-207ENST00000396581 MIR7-3HGQ8N6C7 128 aa9.38□□□□□ -0.91
TRIM40-207ENST00000396581 F8P00451 2351 aa9.37□□□□□ -0.91
TRIM40-207ENST00000396581 UBE2L6O14933 153 aa9.37□□□□□ -0.91
TRIM40-207ENST00000396581 C3orf22Q8N5N4 141 aa9.37□□□□□ -0.91
TRIM40-207ENST00000396581 SND1-IT1Q9HBX3 110 aa9.37□□□□□ -0.91
TRIM40-207ENST00000396581 TRBV6-4A0A1B0GX49 114 aa9.36□□□□□ -0.91
TRIM40-207ENST00000396581 PLAC8L1A1L4L8 177 aa9.36□□□□□ -0.91
TRIM40-207ENST00000396581 HIST1H4AP62805 103 aaKnown RBP9.36□□□□□ -0.91
TRIM40-207ENST00000396581 A0A1W2PRX2 142 aa9.36□□□□□ -0.91
TRIM40-207ENST00000396581 UQCRQO14949 82 aa9.36□□□□□ -0.91
TRIM40-207ENST00000396581 Q9HAA7 133 aa9.36□□□□□ -0.91
TRIM40-207ENST00000396581 IGHV3OR16-9A0A0B4J2B5 98 aa9.35□□□□□ -0.91
TRIM40-207ENST00000396581 H0YGX0 51 aa9.35□□□□□ -0.91
TRIM40-207ENST00000396581 GIG44P09565 113 aaPredicted RBP9.35□□□□□ -0.91
TRIM40-207ENST00000396581 SMIM11BQ8TCY0 68 aa9.35□□□□□ -0.91
TRIM40-207ENST00000396581 IBA57-AS1B1ANH7 110 aa9.35□□□□□ -0.91
TRIM40-207ENST00000396581 LINC00526Q96FQ7 95 aa9.35□□□□□ -0.91
TRIM40-207ENST00000396581 NOP10Q9NPE3 64 aaKnown RBP9.35□□□□□ -0.91
TRIM40-207ENST00000396581 CCL18P55774 89 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms