RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 HIST3H2BBQ8N257 126 aa10.86□□□□□ -0.67
CXCL1-201ENST00000395761 NTN5Q8WTR8 489 aaPredicted RBP10.86□□□□□ -0.67
CXCL1-201ENST00000395761 CHCHD10Q8WYQ3 142 aaPredicted RBP10.86□□□□□ -0.67
CXCL1-201ENST00000395761 AMELXQ99217 191 aa10.86□□□□□ -0.67
CXCL1-201ENST00000395761 LINC00959A0A1B0GUT2 108 aa10.85□□□□□ -0.67
CXCL1-201ENST00000395761 GAGE12HA6NDE8 117 aa10.85□□□□□ -0.67
CXCL1-201ENST00000395761 KRTAP10-1P60331 282 aa10.85□□□□□ -0.67
CXCL1-201ENST00000395761 Q6ZN92 141 aa10.85□□□□□ -0.67
CXCL1-201ENST00000395761 IFI27L1Q96BM0 104 aa10.85□□□□□ -0.67
CXCL1-201ENST00000395761 VCX2Q9H322 139 aa10.85□□□□□ -0.67
CXCL1-201ENST00000395761 HSPB8Q9UJY1 196 aa10.85□□□□□ -0.67
CXCL1-201ENST00000395761 CCL25O15444 150 aa10.83□□□□□ -0.68
CXCL1-201ENST00000395761 FABP4P15090 132 aa10.83□□□□□ -0.68
CXCL1-201ENST00000395761 GCSHP23434 173 aa10.83□□□□□ -0.68
CXCL1-201ENST00000395761 TEX43Q6ZNM6 134 aa10.83□□□□□ -0.68
CXCL1-201ENST00000395761 LINC00173Q6ZV60 143 aa10.83□□□□□ -0.68
CXCL1-201ENST00000395761 PRSS1P07477 247 aa10.82□□□□□ -0.68
CXCL1-201ENST00000395761 TMA7Q9Y2S6 64 aaKnown RBP10.82□□□□□ -0.68
CXCL1-201ENST00000395761 S100A2P29034 98 aa10.81□□□□□ -0.68
CXCL1-201ENST00000395761 XCL1P47992 114 aa10.81□□□□□ -0.68
CXCL1-201ENST00000395761 FOXI1Q12951 378 aa10.81□□□□□ -0.68
CXCL1-201ENST00000395761 PMVKQ15126 192 aa10.81□□□□□ -0.68
CXCL1-201ENST00000395761 CST9LQ9H4G1 147 aa10.81□□□□□ -0.68
CXCL1-201ENST00000395761 TRAV12-1A0A0B4J245 112 aa10.8□□□□□ -0.68
CXCL1-201ENST00000395761 SS18Q15532 418 aa10.8□□□□□ -0.68
CXCL1-201ENST00000395761 C14orf177Q52M58 125 aa10.8□□□□□ -0.68
CXCL1-201ENST00000395761 FAM19A3Q7Z5A8 133 aa10.8□□□□□ -0.68
CXCL1-201ENST00000395761 HIST1H2BLQ99880 126 aa10.8□□□□□ -0.68
CXCL1-201ENST00000395761 C2orf88Q9BSF0 95 aa10.8□□□□□ -0.68
CXCL1-201ENST00000395761 TRAV13-1A0A0B4J241 112 aa10.79□□□□□ -0.68
CXCL1-201ENST00000395761 IFITM10A6NMD0 228 aa10.79□□□□□ -0.68
CXCL1-201ENST00000395761 LINC01620Q4KN68 170 aa10.79□□□□□ -0.68
CXCL1-201ENST00000395761 ZC2HC1BQ5TFG8 222 aa10.79□□□□□ -0.68
CXCL1-201ENST00000395761 RYR1P21817 5038 aa10.79□□□□□ -0.68
CXCL1-201ENST00000395761 HERC2O95714 4834 aa10.78□□□□□ -0.68
CXCL1-201ENST00000395761 UBE2D1P51668 147 aa10.78□□□□□ -0.68
CXCL1-201ENST00000395761 C15orf56Q8N910 161 aa10.78□□□□□ -0.68
CXCL1-201ENST00000395761 MAP1LC3CQ9BXW4 147 aa10.78□□□□□ -0.68
CXCL1-201ENST00000395761 APOBP04114 4563 aaKnown RBP10.78□□□□□ -0.68
CXCL1-201ENST00000395761 CDK2AP2O75956 126 aa10.77□□□□□ -0.69
CXCL1-201ENST00000395761 CD164L2Q6UWJ8 174 aa10.77□□□□□ -0.69
CXCL1-201ENST00000395761 hDV102S1A0JD36 115 aa10.76□□□□□ -0.69
CXCL1-201ENST00000395761 SEC11AP67812 179 aa10.76□□□□□ -0.69
CXCL1-201ENST00000395761 SYS1-DBNDD2H3BUS1 97 aa10.75□□□□□ -0.69
CXCL1-201ENST00000395761 SLPIP03973 132 aa10.75□□□□□ -0.69
CXCL1-201ENST00000395761 C3orf79P0CE67 100 aa10.75□□□□□ -0.69
CXCL1-201ENST00000395761 LINC00242Q5T6M2 205 aa10.75□□□□□ -0.69
CXCL1-201ENST00000395761 FAM30AQ9NZY2 134 aa10.75□□□□□ -0.69
CXCL1-201ENST00000395761 TINCRA0A1B0GVN0 87 aa10.74□□□□□ -0.69
CXCL1-201ENST00000395761 HIGD2BQ4VC39 106 aa10.74□□□□□ -0.69
CXCL1-201ENST00000395761 CFAP161Q6P656 301 aa10.74□□□□□ -0.69
CXCL1-201ENST00000395761 PET117Q6UWS5 81 aa10.74□□□□□ -0.69
CXCL1-201ENST00000395761 DNAH8Q96JB1 4490 aa10.74□□□□□ -0.69
CXCL1-201ENST00000395761 A0A0J9YXV3 536 aa10.73□□□□□ -0.69
CXCL1-201ENST00000395761 IGLC3P0DOY3 106 aa10.73□□□□□ -0.69
CXCL1-201ENST00000395761 XGP55808 180 aa10.73□□□□□ -0.69
CXCL1-201ENST00000395761 ODF1Q14990 250 aa10.73□□□□□ -0.69
CXCL1-201ENST00000395761 KRTAP17-1Q9BYP8 105 aa10.73□□□□□ -0.69
CXCL1-201ENST00000395761 CHTOPQ9Y3Y2 248 aaKnown RBP10.73□□□□□ -0.69
CXCL1-201ENST00000395761 HSPG2P98160 4391 aa10.73□□□□□ -0.69
CXCL1-201ENST00000395761 IGLV4-69A0A075B6H9 119 aa10.72□□□□□ -0.69
CXCL1-201ENST00000395761 IGHV3OR16-9A0A0B4J2B5 98 aa10.72□□□□□ -0.69
CXCL1-201ENST00000395761 F8VRH5 84 aa10.72□□□□□ -0.69
CXCL1-201ENST00000395761 HERVK_113P63121 156 aa10.72□□□□□ -0.69
CXCL1-201ENST00000395761 COX6A2Q02221 97 aa10.72□□□□□ -0.69
CXCL1-201ENST00000395761 C5orf38Q86SI9 138 aa10.72□□□□□ -0.69
CXCL1-201ENST00000395761 KRTDAPP60985 99 aa10.71□□□□□ -0.69
CXCL1-201ENST00000395761 HAMPP81172 84 aa10.71□□□□□ -0.69
CXCL1-201ENST00000395761 LINC01545Q5VT33 79 aa10.71□□□□□ -0.69
CXCL1-201ENST00000395761 LINC00526Q96FQ7 95 aa10.71□□□□□ -0.69
CXCL1-201ENST00000395761 MRPL35Q9NZE8 188 aaKnown RBP10.71□□□□□ -0.69
CXCL1-201ENST00000395761 IGLV5-45A0A087WSX0 123 aa10.7□□□□□ -0.7
CXCL1-201ENST00000395761 GVQW2A0A096LPI5 108 aaPredicted RBP10.7□□□□□ -0.7
CXCL1-201ENST00000395761 IGHV1-58A0A0C4DH39 117 aa10.7□□□□□ -0.7
CXCL1-201ENST00000395761 H0Y8G0 127 aa10.7□□□□□ -0.7
CXCL1-201ENST00000395761 COX7A2LO14548 114 aa10.7□□□□□ -0.7
CXCL1-201ENST00000395761 CNBPP62633 177 aaKnown RBP10.7□□□□□ -0.7
CXCL1-201ENST00000395761 C9orf163Q8N9P6 203 aa10.7□□□□□ -0.7
CXCL1-201ENST00000395761 GEMIN7Q9H840 131 aaKnown RBP10.7□□□□□ -0.7
CXCL1-201ENST00000395761 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
CXCL1-201ENST00000395761 OR10D4PQ8NGN7 298 aa10.69□□□□□ -0.7
CXCL1-201ENST00000395761 A0A087WZ39 114 aa10.68□□□□□ -0.7
CXCL1-201ENST00000395761 MALP21145 153 aa10.68□□□□□ -0.7
CXCL1-201ENST00000395761 C11orf86A6NJI1 115 aa10.67□□□□□ -0.7
CXCL1-201ENST00000395761 PLNP26678 52 aa10.67□□□□□ -0.7
CXCL1-201ENST00000395761 AKR1D1P51857 326 aa10.67□□□□□ -0.7
CXCL1-201ENST00000395761 Q6ZSA8 131 aa10.67□□□□□ -0.7
CXCL1-201ENST00000395761 CHAC1Q9BUX1 264 aa10.67□□□□□ -0.7
CXCL1-201ENST00000395761 CDKN2A-AS1Q9UH64 79 aa10.67□□□□□ -0.7
CXCL1-201ENST00000395761 C20orf202A1L168 122 aa10.66□□□□□ -0.7
CXCL1-201ENST00000395761 DPM2O94777 84 aa10.66□□□□□ -0.7
CXCL1-201ENST00000395761 ZNF22P17026 224 aaPredicted RBP10.66□□□□□ -0.7
CXCL1-201ENST00000395761 SDIM1Q6ZPB5 146 aa10.66□□□□□ -0.7
CXCL1-201ENST00000395761 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.65□□□□□ -0.7
CXCL1-201ENST00000395761 ZNF561-AS1K7EIQ3 104 aa10.65□□□□□ -0.7
CXCL1-201ENST00000395761 IGKCP01834 107 aa10.65□□□□□ -0.7
CXCL1-201ENST00000395761 LINC00469Q8N7U9 141 aa10.65□□□□□ -0.7
CXCL1-201ENST00000395761 PMCHL2Q9BQD1 86 aa10.65□□□□□ -0.7
CXCL1-201ENST00000395761 H3BRM9 83 aa10.64□□□□□ -0.71
CXCL1-201ENST00000395761 APOMO95445 188 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms