RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 TIMM21Q9BVV7 248 aa12.73□□□□□ -0.37
SREBF1-204ENST00000395756 IGHV3-30-3P0DP02 117 aa12.73□□□□□ -0.37
SREBF1-204ENST00000395756 NPC2P61916 151 aa12.72□□□□□ -0.37
SREBF1-204ENST00000395756 DAZ2Q13117 558 aaKnown RBP12.72□□□□□ -0.37
SREBF1-204ENST00000395756 SPANXA1Q9NS26 97 aa12.72□□□□□ -0.37
SREBF1-204ENST00000395756 LEPROTO15243 131 aa12.72□□□□□ -0.37
SREBF1-204ENST00000395756 CDKN2A-AS1Q9UH64 79 aa12.71□□□□□ -0.37
SREBF1-204ENST00000395756 PRSS2P07478 247 aa12.71□□□□□ -0.38
SREBF1-204ENST00000395756 MRPS36P82909 103 aaKnown RBP12.71□□□□□ -0.38
SREBF1-204ENST00000395756 A0A096LPF7 62 aa12.7□□□□□ -0.38
SREBF1-204ENST00000395756 COX6A2Q02221 97 aa12.7□□□□□ -0.38
SREBF1-204ENST00000395756 H7C2G1 150 aa12.7□□□□□ -0.38
SREBF1-204ENST00000395756 C10orf126Q8N4M7 172 aa12.7□□□□□ -0.38
SREBF1-204ENST00000395756 UBE2D3P61077 147 aa12.69□□□□□ -0.38
SREBF1-204ENST00000395756 UBE2D2P62837 147 aa12.69□□□□□ -0.38
SREBF1-204ENST00000395756 DEFB135Q30KP9 77 aa12.69□□□□□ -0.38
SREBF1-204ENST00000395756 A0A0U1RRA0 63 aa12.69□□□□□ -0.38
SREBF1-204ENST00000395756 FAM19A5Q7Z5A7 132 aaPredicted RBP12.69□□□□□ -0.38
SREBF1-204ENST00000395756 UBE2L6O14933 153 aa12.68□□□□□ -0.38
SREBF1-204ENST00000395756 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
SREBF1-204ENST00000395756 STAB1Q9NY15 2570 aa12.67□□□□□ -0.38
SREBF1-204ENST00000395756 TRBV10-1A0A0K0K1A3 114 aa12.67□□□□□ -0.38
SREBF1-204ENST00000395756 IGHV3-30P01768 117 aa12.67□□□□□ -0.38
SREBF1-204ENST00000395756 IGHV3-30-5P0DP03 117 aa12.67□□□□□ -0.38
SREBF1-204ENST00000395756 DAZ4Q86SG3 579 aaKnown RBP12.67□□□□□ -0.38
SREBF1-204ENST00000395756 C15orf53Q8NAA6 179 aa12.67□□□□□ -0.38
SREBF1-204ENST00000395756 TMEM126AQ9H061 195 aa12.67□□□□□ -0.38
SREBF1-204ENST00000395756 DAZ3Q9NR90 486 aaKnown RBP12.67□□□□□ -0.38
SREBF1-204ENST00000395756 UBE2D1P51668 147 aa12.66□□□□□ -0.38
SREBF1-204ENST00000395756 DAND5Q8N907 189 aa12.66□□□□□ -0.38
SREBF1-204ENST00000395756 KLK5Q9Y337 293 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-204ENST00000395756 TCL1BO95988 128 aa12.66□□□□□ -0.38
SREBF1-204ENST00000395756 SCGB1C2P0DMR2 95 aa12.66□□□□□ -0.38
SREBF1-204ENST00000395756 MUSTN1Q8IVN3 82 aa12.66□□□□□ -0.38
SREBF1-204ENST00000395756 NDUFA12Q9UI09 145 aa12.66□□□□□ -0.38
SREBF1-204ENST00000395756 IGHV1-58A0A0C4DH39 117 aa12.65□□□□□ -0.38
SREBF1-204ENST00000395756 TINCRA0A1B0GVN0 87 aa12.65□□□□□ -0.38
SREBF1-204ENST00000395756 FHL2Q14192 279 aa12.65□□□□□ -0.38
SREBF1-204ENST00000395756 C9orf66Q5T8R8 295 aa12.65□□□□□ -0.38
SREBF1-204ENST00000395756 A0A0J9YXY3 114 aa12.65□□□□□ -0.38
SREBF1-204ENST00000395756 OVOL2Q9BRP0 275 aa12.64□□□□□ -0.39
SREBF1-204ENST00000395756 VSIG2Q96IQ7 327 aa12.64□□□□□ -0.39
SREBF1-204ENST00000395756 CFC1BP0CG36 223 aa12.63□□□□□ -0.39
SREBF1-204ENST00000395756 CFC1P0CG37 223 aa12.63□□□□□ -0.39
SREBF1-204ENST00000395756 LINC00242Q5T6M2 205 aa12.63□□□□□ -0.39
SREBF1-204ENST00000395756 TMEM243Q9BU79 118 aa12.63□□□□□ -0.39
SREBF1-204ENST00000395756 MAST4O15021 2626 aa12.63□□□□□ -0.39
SREBF1-204ENST00000395756 C9JAW5 83 aa12.62□□□□□ -0.39
SREBF1-204ENST00000395756 ADAMTSL4-AS1Q5T5F5 129 aa12.62□□□□□ -0.39
SREBF1-204ENST00000395756 TRBV6-4A0A1B0GX49 114 aa12.62□□□□□ -0.39
SREBF1-204ENST00000395756 FAM222AQ5U5X8 452 aa12.62□□□□□ -0.39
SREBF1-204ENST00000395756 TMEM101Q96IK0 257 aa12.62□□□□□ -0.39
SREBF1-204ENST00000395756 X6R8D5 127 aa12.62□□□□□ -0.39
SREBF1-204ENST00000395756 CDC42SE2Q9NRR3 84 aa12.61□□□□□ -0.39
SREBF1-204ENST00000395756 GYPEP15421 78 aa12.6□□□□□ -0.39
SREBF1-204ENST00000395756 FBN1P35555 2871 aaKnown RBP12.6□□□□□ -0.39
SREBF1-204ENST00000395756 PKD1L1Q8TDX9 2849 aa12.6□□□□□ -0.39
SREBF1-204ENST00000395756 NTN5Q8WTR8 489 aaPredicted RBP12.59□□□□□ -0.39
SREBF1-204ENST00000395756 IGLV4-60A0A075B6I1 120 aa12.59□□□□□ -0.39
SREBF1-204ENST00000395756 C9orf153Q5TBE3 101 aa12.59□□□□□ -0.39
SREBF1-204ENST00000395756 SLC25A20O43772 301 aa12.58□□□□□ -0.4
SREBF1-204ENST00000395756 HTN3P15516 51 aa12.58□□□□□ -0.4
SREBF1-204ENST00000395756 F5H768 121 aa12.58□□□□□ -0.4
SREBF1-204ENST00000395756 OXLD1Q5BKU9 147 aa12.57□□□□□ -0.4
SREBF1-204ENST00000395756 CLPSL2Q6UWE3 100 aa12.57□□□□□ -0.4
SREBF1-204ENST00000395756 SBSPONQ8IVN8 264 aa12.57□□□□□ -0.4
SREBF1-204ENST00000395756 Q9H8V8 135 aa12.57□□□□□ -0.4
SREBF1-204ENST00000395756 WIPF1O43516 503 aa12.56□□□□□ -0.4
SREBF1-204ENST00000395756 EIF4EBP3O60516 100 aaPredicted RBP12.56□□□□□ -0.4
SREBF1-204ENST00000395756 HERVK_113P63121 156 aa12.56□□□□□ -0.4
SREBF1-204ENST00000395756 Q1RN00 199 aa12.56□□□□□ -0.4
SREBF1-204ENST00000395756 TRBV6-8A0A0A6YYG3 113 aa12.56□□□□□ -0.4
SREBF1-204ENST00000395756 TRAV8-4A0A0B4J246 113 aa12.56□□□□□ -0.4
SREBF1-204ENST00000395756 TOMM7Q9P0U1 55 aa12.56□□□□□ -0.4
SREBF1-204ENST00000395756 PRO1854Q9UHT4 67 aa12.56□□□□□ -0.4
SREBF1-204ENST00000395756 TEX49A0A1B0GTD5 131 aa12.55□□□□□ -0.4
SREBF1-204ENST00000395756 TIRAPP58753 221 aa12.55□□□□□ -0.4
SREBF1-204ENST00000395756 Q6Q795 121 aa12.55□□□□□ -0.4
SREBF1-204ENST00000395756 J3KT08 172 aa12.54□□□□□ -0.4
SREBF1-204ENST00000395756 LITAFQ99732 161 aa12.54□□□□□ -0.4
SREBF1-204ENST00000395756 NOTCH1P46531 2555 aa12.54□□□□□ -0.4
SREBF1-204ENST00000395756 IGHV4-28A0A0C4DH34 117 aa12.54□□□□□ -0.4
SREBF1-204ENST00000395756 COL6A5A8TX70 2615 aa12.52□□□□□ -0.4
SREBF1-204ENST00000395756 SMIM1B2RUZ4 78 aa12.52□□□□□ -0.4
SREBF1-204ENST00000395756 OR13C6PQ8NH95 151 aa12.52□□□□□ -0.4
SREBF1-204ENST00000395756 KIR2DL5BQ8NHK3 375 aa12.52□□□□□ -0.4
SREBF1-204ENST00000395756 IGHV4-30-4P0DP06 118 aa12.52□□□□□ -0.41
SREBF1-204ENST00000395756 CELA1Q9UNI1 258 aa12.52□□□□□ -0.41
SREBF1-204ENST00000395756 PAX4O43316 350 aa12.51□□□□□ -0.41
SREBF1-204ENST00000395756 LYRM7Q5U5X0 104 aa12.51□□□□□ -0.41
SREBF1-204ENST00000395756 PRIMA1Q86XR5 153 aa12.51□□□□□ -0.41
SREBF1-204ENST00000395756 C5orf38Q86SI9 138 aa12.51□□□□□ -0.41
SREBF1-204ENST00000395756 FAM236AA0A1B0GUQ0 79 aa12.51□□□□□ -0.41
SREBF1-204ENST00000395756 FAM236BA0A1B0GV22 79 aa12.51□□□□□ -0.41
SREBF1-204ENST00000395756 APOC4P55056 127 aa12.51□□□□□ -0.41
SREBF1-204ENST00000395756 C11orf68Q9H3H3 251 aaKnown RBP12.5□□□□□ -0.41
SREBF1-204ENST00000395756 IGLV5-45A0A087WSX0 123 aa12.5□□□□□ -0.41
SREBF1-204ENST00000395756 DAD1P61803 113 aa12.5□□□□□ -0.41
SREBF1-204ENST00000395756 PRO0255Q9UI72 69 aa12.5□□□□□ -0.41
SREBF1-204ENST00000395756 Q8N3U1 123 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms