RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 RBMY1BA6NDE4 496 aaKnown RBP9.61□□□□□ -0.87
NFKB1-202ENST00000394820 RBMY1EA6NEQ0 496 aaKnown RBP9.61□□□□□ -0.87
NFKB1-202ENST00000394820 RBMY1DP0C7P1 496 aaKnown RBP9.61□□□□□ -0.87
NFKB1-202ENST00000394820 Q8N2B8 174 aa9.61□□□□□ -0.87
NFKB1-202ENST00000394820 C9orf85Q96MD7 179 aa9.61□□□□□ -0.87
NFKB1-202ENST00000394820 TRBV30A0A0K0K1B3 111 aa9.6□□□□□ -0.87
NFKB1-202ENST00000394820 RPL32P62910 135 aaKnown RBP9.6□□□□□ -0.87
NFKB1-202ENST00000394820 HELZ2Q9BYK8 2649 aaKnown RBP9.6□□□□□ -0.87
NFKB1-202ENST00000394820 A0A1B0GX51 115 aa9.6□□□□□ -0.87
NFKB1-202ENST00000394820 DEFB113Q30KQ7 82 aa9.6□□□□□ -0.87
NFKB1-202ENST00000394820 WFDC9Q8NEX5 89 aa9.6□□□□□ -0.87
NFKB1-202ENST00000394820 K7EMT4 169 aa9.6□□□□□ -0.87
NFKB1-202ENST00000394820 NCR3O14931 201 aa9.6□□□□□ -0.87
NFKB1-202ENST00000394820 HAMPP81172 84 aa9.6□□□□□ -0.87
NFKB1-202ENST00000394820 S100A7L2Q5SY68 101 aa9.6□□□□□ -0.87
NFKB1-202ENST00000394820 ATRQ13535 2644 aa9.59□□□□□ -0.87
NFKB1-202ENST00000394820 H3BT86 120 aa9.59□□□□□ -0.87
NFKB1-202ENST00000394820 LINC00526Q96FQ7 95 aa9.59□□□□□ -0.87
NFKB1-202ENST00000394820 ZNF702PQ9H963 129 aa9.59□□□□□ -0.87
NFKB1-202ENST00000394820 A0A087WVE0 104 aa9.59□□□□□ -0.87
NFKB1-202ENST00000394820 LINC01546A6NGU7 62 aa9.59□□□□□ -0.87
NFKB1-202ENST00000394820 CFAP161Q6P656 301 aa9.59□□□□□ -0.87
NFKB1-202ENST00000394820 ODF3Q96PU9 254 aa9.59□□□□□ -0.87
NFKB1-202ENST00000394820 UBE2D4Q9Y2X8 147 aa9.59□□□□□ -0.87
NFKB1-202ENST00000394820 TRBV6-5A0A0K0K1A5 114 aa9.58□□□□□ -0.88
NFKB1-202ENST00000394820 MAP6D1Q9H9H5 199 aa9.58□□□□□ -0.88
NFKB1-202ENST00000394820 SHISA2Q6UWI4 295 aa9.58□□□□□ -0.88
NFKB1-202ENST00000394820 hADV29S1A0JD25 119 aa9.58□□□□□ -0.88
NFKB1-202ENST00000394820 LST1O00453 97 aa9.58□□□□□ -0.88
NFKB1-202ENST00000394820 TMEM86BQ8N661 226 aa9.58□□□□□ -0.88
NFKB1-202ENST00000394820 PF4P02776 101 aa9.57□□□□□ -0.88
NFKB1-202ENST00000394820 PRR3P79522 188 aaKnown RBP9.57□□□□□ -0.88
NFKB1-202ENST00000394820 Q6YL49 198 aa9.57□□□□□ -0.88
NFKB1-202ENST00000394820 ITPR2Q14571 2701 aa9.56□□□□□ -0.88
NFKB1-202ENST00000394820 APCP25054 2843 aa9.56□□□□□ -0.88
NFKB1-202ENST00000394820 J3QLI3 93 aa9.56□□□□□ -0.88
NFKB1-202ENST00000394820 LOC107984640A0A0U1RRK4 108 aa9.55□□□□□ -0.88
NFKB1-202ENST00000394820 COX7A2LO14548 114 aa9.55□□□□□ -0.88
NFKB1-202ENST00000394820 INAFM2P0DMQ5 153 aa9.55□□□□□ -0.88
NFKB1-202ENST00000394820 MRPS36P82909 103 aaKnown RBP9.55□□□□□ -0.88
NFKB1-202ENST00000394820 TIRAPP58753 221 aa9.55□□□□□ -0.88
NFKB1-202ENST00000394820 KLK9Q2XQG4 91 aa9.55□□□□□ -0.88
NFKB1-202ENST00000394820 LINC00242Q5T6M2 205 aa9.55□□□□□ -0.88
NFKB1-202ENST00000394820 TRAV23DV6A0A075B6W5 121 aa9.54□□□□□ -0.88
NFKB1-202ENST00000394820 K7EQD1 137 aa9.54□□□□□ -0.88
NFKB1-202ENST00000394820 COX7B2Q8TF08 81 aa9.54□□□□□ -0.88
NFKB1-202ENST00000394820 AMELXQ99217 191 aa9.54□□□□□ -0.88
NFKB1-202ENST00000394820 CHCHD7Q9BUK0 85 aa9.54□□□□□ -0.88
NFKB1-202ENST00000394820 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
NFKB1-202ENST00000394820 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.53□□□□□ -0.88
NFKB1-202ENST00000394820 ANGP03950 147 aaKnown RBP9.53□□□□□ -0.88
NFKB1-202ENST00000394820 UBR5O95071 2799 aaPredicted RBP9.53□□□□□ -0.88
NFKB1-202ENST00000394820 UNC79Q9P2D8 2635 aa9.53□□□□□ -0.88
NFKB1-202ENST00000394820 TRAV13-2A0A0B4J235 113 aa9.52□□□□□ -0.88
NFKB1-202ENST00000394820 CCL24O00175 119 aa9.52□□□□□ -0.89
NFKB1-202ENST00000394820 NHLRC4P0CG21 123 aaPredicted RBP9.52□□□□□ -0.89
NFKB1-202ENST00000394820 FAM19A4Q96LR4 140 aa9.52□□□□□ -0.89
NFKB1-202ENST00000394820 GYPEP15421 78 aa9.5□□□□□ -0.89
NFKB1-202ENST00000394820 CITED2Q99967 270 aaPredicted RBP9.5□□□□□ -0.89
NFKB1-202ENST00000394820 NDUFA1O15239 70 aa9.5□□□□□ -0.89
NFKB1-202ENST00000394820 PPDPFQ9H3Y8 114 aa9.5□□□□□ -0.89
NFKB1-202ENST00000394820 TRACP01848 142 aa9.49□□□□□ -0.89
NFKB1-202ENST00000394820 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
NFKB1-202ENST00000394820 SOSTDC1Q6X4U4 206 aa9.49□□□□□ -0.89
NFKB1-202ENST00000394820 SCXQ7RTU7 201 aa9.49□□□□□ -0.89
NFKB1-202ENST00000394820 LINC00643Q86TS7 51 aa9.49□□□□□ -0.89
NFKB1-202ENST00000394820 A0A096LNT2 108 aa9.49□□□□□ -0.89
NFKB1-202ENST00000394820 DNAJC9-AS1A6NH13 148 aa9.49□□□□□ -0.89
NFKB1-202ENST00000394820 DEFB114Q30KQ6 69 aa9.49□□□□□ -0.89
NFKB1-202ENST00000394820 A0A087WYN8 130 aa9.48□□□□□ -0.89
NFKB1-202ENST00000394820 SMIM1B2RUZ4 78 aa9.48□□□□□ -0.89
NFKB1-202ENST00000394820 SS18Q15532 418 aa9.48□□□□□ -0.89
NFKB1-202ENST00000394820 SMIM11BQ8TCY0 68 aa9.48□□□□□ -0.89
NFKB1-202ENST00000394820 FAM218AQ96MZ4 157 aa9.48□□□□□ -0.89
NFKB1-202ENST00000394820 PYGO1Q9Y3Y4 419 aa9.48□□□□□ -0.89
NFKB1-202ENST00000394820 A8MTW9 85 aa9.47□□□□□ -0.89
NFKB1-202ENST00000394820 SPANXDQ9BXN6 97 aa9.47□□□□□ -0.89
NFKB1-202ENST00000394820 SPANXCQ9NY87 97 aa9.47□□□□□ -0.89
NFKB1-202ENST00000394820 IGLV4-60A0A075B6I1 120 aa9.47□□□□□ -0.89
NFKB1-202ENST00000394820 F5H768 121 aa9.47□□□□□ -0.89
NFKB1-202ENST00000394820 C9orf116Q5BN46 136 aaPredicted RBP9.47□□□□□ -0.89
NFKB1-202ENST00000394820 LINC00269Q8N2A0 174 aa9.46□□□□□ -0.9
NFKB1-202ENST00000394820 SMR3AQ99954 134 aa9.46□□□□□ -0.9
NFKB1-202ENST00000394820 DSCR8Q96T75 97 aa9.45□□□□□ -0.9
NFKB1-202ENST00000394820 NBEAL1Q6ZS30 2694 aa9.45□□□□□ -0.9
NFKB1-202ENST00000394820 BRI3O95415 125 aa9.45□□□□□ -0.9
NFKB1-202ENST00000394820 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
NFKB1-202ENST00000394820 ORMDL1Q9P0S3 153 aa9.45□□□□□ -0.9
NFKB1-202ENST00000394820 M0QXV9 152 aa9.45□□□□□ -0.9
NFKB1-202ENST00000394820 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
NFKB1-202ENST00000394820 C20orf197Q8N268 126 aa9.45□□□□□ -0.9
NFKB1-202ENST00000394820 TMEM89A2RUT3 159 aa9.44□□□□□ -0.9
NFKB1-202ENST00000394820 CCL18P55774 89 aa9.44□□□□□ -0.9
NFKB1-202ENST00000394820 SETXQ7Z333 2677 aaKnown RBP9.44□□□□□ -0.9
NFKB1-202ENST00000394820 CXCL5P42830 114 aa9.44□□□□□ -0.9
NFKB1-202ENST00000394820 DNAJC30Q96LL9 226 aa9.44□□□□□ -0.9
NFKB1-202ENST00000394820 LITAFQ99732 161 aa9.44□□□□□ -0.9
NFKB1-202ENST00000394820 LINC00337Q8N6G1 96 aa9.44□□□□□ -0.9
NFKB1-202ENST00000394820 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
NFKB1-202ENST00000394820 DAD1P61803 113 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms