RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 CSDC2Q9Y534 153 aaKnown RBP5.52□□□□□ -1.53
SYNE2-205ENST00000394768 E7EUB6 86 aa5.52□□□□□ -1.53
SYNE2-205ENST00000394768 Q6ZQY7 126 aa5.52□□□□□ -1.53
SYNE2-205ENST00000394768 Q6ZSV7 163 aa5.51□□□□□ -1.53
SYNE2-205ENST00000394768 CIRBP-AS1Q8TBR5 109 aa5.51□□□□□ -1.53
SYNE2-205ENST00000394768 SPRNQ5BIV9 151 aa5.51□□□□□ -1.53
SYNE2-205ENST00000394768 IGLV2-18A0A075B6J9 118 aa5.51□□□□□ -1.53
SYNE2-205ENST00000394768 ZNF22P17026 224 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-205ENST00000394768 HRCT1Q6UXD1 115 aa5.51□□□□□ -1.53
SYNE2-205ENST00000394768 TRIAP1O43715 76 aa5.51□□□□□ -1.53
SYNE2-205ENST00000394768 CEMP1Q6PRD7 247 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-205ENST00000394768 A0A0J9YWU9 116 aa5.5□□□□□ -1.53
SYNE2-205ENST00000394768 JMJD1CQ15652 2540 aa5.5□□□□□ -1.53
SYNE2-205ENST00000394768 PPDPFQ9H3Y8 114 aa5.5□□□□□ -1.53
SYNE2-205ENST00000394768 M0R2N4 97 aa5.5□□□□□ -1.53
SYNE2-205ENST00000394768 BBC3Q96PG8 261 aaPredicted RBP5.5□□□□□ -1.53
SYNE2-205ENST00000394768 PIEZO2Q9H5I5 2752 aa5.5□□□□□ -1.53
SYNE2-205ENST00000394768 MBD6Q96DN6 1003 aa5.49□□□□□ -1.53
SYNE2-205ENST00000394768 Q8NA96 180 aa5.49□□□□□ -1.53
SYNE2-205ENST00000394768 U3KQK5 164 aa5.49□□□□□ -1.53
SYNE2-205ENST00000394768 USP9XQ93008 2570 aaPredicted RBP5.49□□□□□ -1.53
SYNE2-205ENST00000394768 TP53TG3Q9ULZ0 132 aa5.49□□□□□ -1.53
SYNE2-205ENST00000394768 SCXQ7RTU7 201 aa5.49□□□□□ -1.53
SYNE2-205ENST00000394768 EIF4EBP1Q13541 118 aaPredicted RBP5.49□□□□□ -1.53
SYNE2-205ENST00000394768 LOC100131303A0A0U1RQF7 123 aa5.49□□□□□ -1.53
SYNE2-205ENST00000394768 PTPRBP23467 1997 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 LINC00959A0A1B0GUT2 108 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 C1orf134Q5TEV5 83 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 LINC00173Q6ZV60 143 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 Q8N2B8 174 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 ZFAND3Q9H8U3 227 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 C1orf137Q5JT78 98 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 X6R8D5 127 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 RETNQ9HD89 108 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 TLN1Q9Y490 2541 aaKnown RBP5.48□□□□□ -1.53
SYNE2-205ENST00000394768 TRAV7A0A075B6U4 112 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 COX7CP15954 63 aa5.48□□□□□ -1.53
SYNE2-205ENST00000394768 IGLV2-14P01704 120 aa5.47□□□□□ -1.53
SYNE2-205ENST00000394768 RPL37AP8A6NKH3 93 aa5.47□□□□□ -1.53
SYNE2-205ENST00000394768 KLLNB2CW77 178 aa5.47□□□□□ -1.53
SYNE2-205ENST00000394768 LINC01006Q8NI28 216 aa5.47□□□□□ -1.53
SYNE2-205ENST00000394768 SMIM26A0A096LP01 95 aa5.47□□□□□ -1.53
SYNE2-205ENST00000394768 ACANP16112 2415 aa5.47□□□□□ -1.53
SYNE2-205ENST00000394768 FAM30AQ9NZY2 134 aa5.47□□□□□ -1.53
SYNE2-205ENST00000394768 hDV103S1A0JD37 113 aa5.46□□□□□ -1.53
SYNE2-205ENST00000394768 ZNF702PQ9H963 129 aa5.46□□□□□ -1.53
SYNE2-205ENST00000394768 C2orf48Q96LS8 159 aa5.46□□□□□ -1.53
SYNE2-205ENST00000394768 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.54
SYNE2-205ENST00000394768 IGHV6-1A0A0B4J1U7 121 aa5.46□□□□□ -1.54
SYNE2-205ENST00000394768 IGHV4-30-4P0DP06 118 aa5.46□□□□□ -1.54
SYNE2-205ENST00000394768 SLPIP03973 132 aa5.46□□□□□ -1.54
SYNE2-205ENST00000394768 NTM-AS1Q6ZSK4 140 aa5.46□□□□□ -1.54
SYNE2-205ENST00000394768 ANKRD17O75179 2603 aaKnown RBP5.46□□□□□ -1.54
SYNE2-205ENST00000394768 CELA1Q9UNI1 258 aa5.46□□□□□ -1.54
SYNE2-205ENST00000394768 A0A0U1RQV1 116 aa5.46□□□□□ -1.54
SYNE2-205ENST00000394768 NANOS2P60321 138 aaKnown RBP5.46□□□□□ -1.54
SYNE2-205ENST00000394768 IGF2RP11717 2491 aa5.46□□□□□ -1.54
SYNE2-205ENST00000394768 CYSRT1A8MQ03 144 aa5.45□□□□□ -1.54
SYNE2-205ENST00000394768 PLA2G2AP14555 144 aa5.45□□□□□ -1.54
SYNE2-205ENST00000394768 ZNF80P51504 273 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-205ENST00000394768 SMIM11BQ8TCY0 68 aa5.45□□□□□ -1.54
SYNE2-205ENST00000394768 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
SYNE2-205ENST00000394768 LINC01561Q8N1V8 128 aa5.45□□□□□ -1.54
SYNE2-205ENST00000394768 TSHBP01222 138 aa5.45□□□□□ -1.54
SYNE2-205ENST00000394768 C1orf195Q5TG92 126 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 SNURFQ9Y675 71 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 A0A1B0GW54 56 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 C11orf71Q6IPW1 123 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 RNASE8Q8TDE3 154 aaKnown RBP5.44□□□□□ -1.54
SYNE2-205ENST00000394768 EDN2P20800 178 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 IGLV1-40P01703 118 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 DEFB1P60022 68 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 Q6Q795 121 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 Q9BRP9 147 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 Q8N814 137 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 TTTY13Q9BZ97 58 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 ZNF580Q9UK33 172 aa5.44□□□□□ -1.54
SYNE2-205ENST00000394768 PTH2Q96A98 100 aa5.43□□□□□ -1.54
SYNE2-205ENST00000394768 CNFNQ9BYD5 112 aa5.43□□□□□ -1.54
SYNE2-205ENST00000394768 CDC42SE2Q9NRR3 84 aa5.43□□□□□ -1.54
SYNE2-205ENST00000394768 LINC00208Q96KT6 92 aa5.43□□□□□ -1.54
SYNE2-205ENST00000394768 SETD2Q9BYW2 2564 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-205ENST00000394768 A0A1B0GUV1 79 aa5.43□□□□□ -1.54
SYNE2-205ENST00000394768 LINC01547P58512 204 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-205ENST00000394768 LINC01556Q5JQF7 62 aa5.43□□□□□ -1.54
SYNE2-205ENST00000394768 MT-ATP8P03928 68 aa5.42□□□□□ -1.54
SYNE2-205ENST00000394768 WDR87Q6ZQQ6 2873 aa5.42□□□□□ -1.54
SYNE2-205ENST00000394768 FAM229AH3BQW9 127 aa5.41□□□□□ -1.54
SYNE2-205ENST00000394768 H0Y9P7 68 aa5.41□□□□□ -1.54
SYNE2-205ENST00000394768 FRMD6-AS1P0C7T7 363 aa5.41□□□□□ -1.54
SYNE2-205ENST00000394768 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
SYNE2-205ENST00000394768 C19orf84I3L1E1 186 aa5.4□□□□□ -1.54
SYNE2-205ENST00000394768 PRR4Q16378 134 aa5.4□□□□□ -1.54
SYNE2-205ENST00000394768 GDF5OSQ5U4N7 250 aa5.4□□□□□ -1.54
SYNE2-205ENST00000394768 C16orf95Q9H693 158 aa5.4□□□□□ -1.54
SYNE2-205ENST00000394768 NUPR1O60356 82 aa5.4□□□□□ -1.54
SYNE2-205ENST00000394768 C6orf223Q8N319 242 aa5.4□□□□□ -1.54
SYNE2-205ENST00000394768 IGLV1-51P01701 117 aa5.4□□□□□ -1.54
SYNE2-205ENST00000394768 C22orf34Q6ZV56 151 aa5.4□□□□□ -1.54
SYNE2-205ENST00000394768 Q8N6K4 173 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms