RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ATXN8Q156A1 80 aa9.56□□□□□ -0.88
GTF2F1-201ENST00000394456 CLUHP3Q96NS8 147 aa9.55□□□□□ -0.88
GTF2F1-201ENST00000394456 H7C423 109 aa9.55□□□□□ -0.88
GTF2F1-201ENST00000394456 NDUFA1O15239 70 aa9.55□□□□□ -0.88
GTF2F1-201ENST00000394456 PF4P02776 101 aa9.55□□□□□ -0.88
GTF2F1-201ENST00000394456 TIRAPP58753 221 aa9.55□□□□□ -0.88
GTF2F1-201ENST00000394456 SCGB1A1P11684 91 aa9.54□□□□□ -0.88
GTF2F1-201ENST00000394456 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
GTF2F1-201ENST00000394456 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
GTF2F1-201ENST00000394456 TEP1Q99973 2627 aaKnown RBP9.54□□□□□ -0.88
GTF2F1-201ENST00000394456 C19orf73Q9NVV2 129 aa9.54□□□□□ -0.88
GTF2F1-201ENST00000394456 IGLV5-39A0A0G2JS06 123 aa9.54□□□□□ -0.88
GTF2F1-201ENST00000394456 CRLF1O75462 422 aa9.54□□□□□ -0.88
GTF2F1-201ENST00000394456 LINC00308Q8TCZ7 52 aa9.54□□□□□ -0.88
GTF2F1-201ENST00000394456 CDC42SE2Q9NRR3 84 aa9.54□□□□□ -0.88
GTF2F1-201ENST00000394456 CKS1BP61024 79 aa9.53□□□□□ -0.88
GTF2F1-201ENST00000394456 TRGV2A0A075B6R0 118 aa9.53□□□□□ -0.88
GTF2F1-201ENST00000394456 F5H768 121 aa9.53□□□□□ -0.88
GTF2F1-201ENST00000394456 SPATA3Q8NHX4 192 aa9.53□□□□□ -0.88
GTF2F1-201ENST00000394456 TRAV4A0A0B4J268 109 aa9.52□□□□□ -0.89
GTF2F1-201ENST00000394456 TRBV10-2A0A0K0K1G8 114 aa9.52□□□□□ -0.89
GTF2F1-201ENST00000394456 GAGE6Q13070 117 aa9.52□□□□□ -0.89
GTF2F1-201ENST00000394456 C2orf82Q6UX34 121 aa9.52□□□□□ -0.89
GTF2F1-201ENST00000394456 HERVK_113P63121 156 aa9.51□□□□□ -0.89
GTF2F1-201ENST00000394456 PRIMA1Q86XR5 153 aa9.51□□□□□ -0.89
GTF2F1-201ENST00000394456 F8P00451 2351 aa9.51□□□□□ -0.89
GTF2F1-201ENST00000394456 IGLV4-60A0A075B6I1 120 aa9.51□□□□□ -0.89
GTF2F1-201ENST00000394456 MEIG1Q5JSS6 88 aa9.5□□□□□ -0.89
GTF2F1-201ENST00000394456 LINC00482Q8N8I6 264 aa9.5□□□□□ -0.89
GTF2F1-201ENST00000394456 CIDEAO60543 219 aa9.49□□□□□ -0.89
GTF2F1-201ENST00000394456 CMC4P56277 68 aaPredicted RBP9.49□□□□□ -0.89
GTF2F1-201ENST00000394456 DAZ2Q13117 558 aaKnown RBP9.49□□□□□ -0.89
GTF2F1-201ENST00000394456 DAZ4Q86SG3 579 aaKnown RBP9.49□□□□□ -0.89
GTF2F1-201ENST00000394456 DAZ3Q9NR90 486 aaKnown RBP9.49□□□□□ -0.89
GTF2F1-201ENST00000394456 LST1O00453 97 aa9.48□□□□□ -0.89
GTF2F1-201ENST00000394456 TIMM17BO60830 172 aa9.48□□□□□ -0.89
GTF2F1-201ENST00000394456 CSNK1G2-AS1Q8NCQ2 148 aa9.48□□□□□ -0.89
GTF2F1-201ENST00000394456 TOMM7Q9P0U1 55 aa9.48□□□□□ -0.89
GTF2F1-201ENST00000394456 TRBV10-1A0A0K0K1A3 114 aa9.48□□□□□ -0.89
GTF2F1-201ENST00000394456 UBE2WQ96B02 151 aa9.48□□□□□ -0.89
GTF2F1-201ENST00000394456 TMEM243Q9BU79 118 aa9.48□□□□□ -0.89
GTF2F1-201ENST00000394456 TRRAPQ9Y4A5 3859 aa9.48□□□□□ -0.89
GTF2F1-201ENST00000394456 UBE2L6O14933 153 aa9.47□□□□□ -0.89
GTF2F1-201ENST00000394456 TRGV4A0A0C4DH28 118 aa9.47□□□□□ -0.89
GTF2F1-201ENST00000394456 FAM110AQ9BQ89 295 aa9.47□□□□□ -0.89
GTF2F1-201ENST00000394456 DEFB130BP0DP73 79 aa9.47□□□□□ -0.89
GTF2F1-201ENST00000394456 DEFB130AP0DP74 79 aa9.47□□□□□ -0.89
GTF2F1-201ENST00000394456 IFITM1P13164 125 aa9.46□□□□□ -0.89
GTF2F1-201ENST00000394456 CIRBPQ14011 172 aaKnown RBP9.46□□□□□ -0.89
GTF2F1-201ENST00000394456 A0A1B0GV72 72 aa9.46□□□□□ -0.9
GTF2F1-201ENST00000394456 COX6CP09669 75 aa9.46□□□□□ -0.9
GTF2F1-201ENST00000394456 CSDC2Q9Y534 153 aaKnown RBP9.46□□□□□ -0.9
GTF2F1-201ENST00000394456 A0A096LPF7 62 aa9.45□□□□□ -0.9
GTF2F1-201ENST00000394456 M0QXV9 152 aa9.45□□□□□ -0.9
GTF2F1-201ENST00000394456 FHL2Q14192 279 aa9.45□□□□□ -0.9
GTF2F1-201ENST00000394456 RNF183Q96D59 192 aa9.45□□□□□ -0.9
GTF2F1-201ENST00000394456 FAM218AQ96MZ4 157 aa9.45□□□□□ -0.9
GTF2F1-201ENST00000394456 C11orf68Q9H3H3 251 aaKnown RBP9.45□□□□□ -0.9
GTF2F1-201ENST00000394456 TRAV26-1A0A087WT03 109 aa9.45□□□□□ -0.9
GTF2F1-201ENST00000394456 C16orf74Q96GX8 76 aa9.45□□□□□ -0.9
GTF2F1-201ENST00000394456 CITED1Q99966 193 aa9.45□□□□□ -0.9
GTF2F1-201ENST00000394456 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
GTF2F1-201ENST00000394456 TTC32Q5I0X7 151 aa9.44□□□□□ -0.9
GTF2F1-201ENST00000394456 FAM19A3Q7Z5A8 133 aa9.44□□□□□ -0.9
GTF2F1-201ENST00000394456 C5orf38Q86SI9 138 aa9.44□□□□□ -0.9
GTF2F1-201ENST00000394456 CHCHD5Q9BSY4 110 aa9.44□□□□□ -0.9
GTF2F1-201ENST00000394456 CLPSL2Q6UWE3 100 aa9.43□□□□□ -0.9
GTF2F1-201ENST00000394456 MIR7-3HGQ8N6C7 128 aa9.43□□□□□ -0.9
GTF2F1-201ENST00000394456 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
GTF2F1-201ENST00000394456 C15orf53Q8NAA6 179 aa9.42□□□□□ -0.9
GTF2F1-201ENST00000394456 DEFB4AO15263 64 aa9.41□□□□□ -0.9
GTF2F1-201ENST00000394456 SHISA2Q6UWI4 295 aa9.41□□□□□ -0.9
GTF2F1-201ENST00000394456 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
GTF2F1-201ENST00000394456 SVIPQ8NHG7 77 aa9.41□□□□□ -0.9
GTF2F1-201ENST00000394456 COX7B2Q8TF08 81 aa9.41□□□□□ -0.9
GTF2F1-201ENST00000394456 Q9HAA7 133 aa9.41□□□□□ -0.9
GTF2F1-201ENST00000394456 IGKV2-28A0A075B6P5 120 aa9.4□□□□□ -0.9
GTF2F1-201ENST00000394456 TRBV6-8A0A0A6YYG3 113 aa9.4□□□□□ -0.9
GTF2F1-201ENST00000394456 TRBV6-4A0A1B0GX49 114 aa9.4□□□□□ -0.9
GTF2F1-201ENST00000394456 IGKV2D-28P01615 120 aa9.4□□□□□ -0.9
GTF2F1-201ENST00000394456 LINC01600Q96MT4 127 aa9.4□□□□□ -0.9
GTF2F1-201ENST00000394456 OVOL2Q9BRP0 275 aa9.4□□□□□ -0.9
GTF2F1-201ENST00000394456 H3BT86 120 aa9.4□□□□□ -0.9
GTF2F1-201ENST00000394456 PFN2P35080 140 aa9.4□□□□□ -0.9
GTF2F1-201ENST00000394456 Q8N3U1 123 aa9.4□□□□□ -0.9
GTF2F1-201ENST00000394456 COX7A2LO14548 114 aa9.4□□□□□ -0.91
GTF2F1-201ENST00000394456 NHLRC4P0CG21 123 aaPredicted RBP9.4□□□□□ -0.91
GTF2F1-201ENST00000394456 C22orf24Q9Y442 160 aa9.4□□□□□ -0.91
GTF2F1-201ENST00000394456 SNCGO76070 127 aa9.39□□□□□ -0.91
GTF2F1-201ENST00000394456 C9orf66Q5T8R8 295 aa9.39□□□□□ -0.91
GTF2F1-201ENST00000394456 IGHV3OR16-9A0A0B4J2B5 98 aa9.38□□□□□ -0.91
GTF2F1-201ENST00000394456 LINC00158P58513 81 aa9.38□□□□□ -0.91
GTF2F1-201ENST00000394456 GYPEP15421 78 aa9.37□□□□□ -0.91
GTF2F1-201ENST00000394456 ANAPC13Q9BS18 74 aa9.37□□□□□ -0.91
GTF2F1-201ENST00000394456 BAHCC1Q9P281 2608 aa9.37□□□□□ -0.91
GTF2F1-201ENST00000394456 XCL1P47992 114 aa9.37□□□□□ -0.91
GTF2F1-201ENST00000394456 GAGE2BQ13066 116 aa9.37□□□□□ -0.91
GTF2F1-201ENST00000394456 GAGE2EQ4V326 116 aa9.37□□□□□ -0.91
GTF2F1-201ENST00000394456 GAGE2DQ9UEU5 116 aa9.37□□□□□ -0.91
GTF2F1-201ENST00000394456 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms