RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 LOC100131303A0A0U1RQF7 123 aa13.33□□□□□ -0.28
CBX1-202ENST00000393408 GAGE7O76087 117 aa13.33□□□□□ -0.28
CBX1-202ENST00000393408 NHLRC4P0CG21 123 aaPredicted RBP13.33□□□□□ -0.28
CBX1-202ENST00000393408 GAGE12FP0CL80 117 aa13.33□□□□□ -0.28
CBX1-202ENST00000393408 GAGE12GP0CL81 117 aa13.33□□□□□ -0.28
CBX1-202ENST00000393408 GAGE12IP0CL82 117 aa13.33□□□□□ -0.28
CBX1-202ENST00000393408 CMC4P56277 68 aaPredicted RBP13.33□□□□□ -0.28
CBX1-202ENST00000393408 WFDC10AQ9H1F0 79 aa13.32□□□□□ -0.28
CBX1-202ENST00000393408 TRGV2A0A075B6R0 118 aa13.32□□□□□ -0.28
CBX1-202ENST00000393408 MRPL23Q16540 153 aaKnown RBP13.32□□□□□ -0.28
CBX1-202ENST00000393408 APCP25054 2843 aa13.32□□□□□ -0.28
CBX1-202ENST00000393408 ITPR3Q14573 2671 aa13.32□□□□□ -0.28
CBX1-202ENST00000393408 NDUFV3P56181 108 aaKnown RBP13.31□□□□□ -0.28
CBX1-202ENST00000393408 SONP18583 2426 aaKnown RBP13.31□□□□□ -0.28
CBX1-202ENST00000393408 TRBV6-4A0A1B0GX49 114 aa13.31□□□□□ -0.28
CBX1-202ENST00000393408 WFDC11Q8NEX6 87 aa13.31□□□□□ -0.28
CBX1-202ENST00000393408 NF1P21359 2839 aa13.3□□□□□ -0.28
CBX1-202ENST00000393408 RPL35AP18077 110 aaKnown RBP13.3□□□□□ -0.28
CBX1-202ENST00000393408 OVOL2Q9BRP0 275 aa13.3□□□□□ -0.28
CBX1-202ENST00000393408 C19orf73Q9NVV2 129 aa13.3□□□□□ -0.28
CBX1-202ENST00000393408 TTC32Q5I0X7 151 aa13.29□□□□□ -0.28
CBX1-202ENST00000393408 SETXQ7Z333 2677 aaKnown RBP13.29□□□□□ -0.28
CBX1-202ENST00000393408 NOTCH3Q9UM47 2321 aa13.29□□□□□ -0.28
CBX1-202ENST00000393408 CSNK1G2-AS1Q8NCQ2 148 aa13.28□□□□□ -0.28
CBX1-202ENST00000393408 COX7B2Q8TF08 81 aa13.28□□□□□ -0.28
CBX1-202ENST00000393408 FAM110AQ9BQ89 295 aa13.28□□□□□ -0.28
CBX1-202ENST00000393408 TRACP01848 142 aa13.28□□□□□ -0.28
CBX1-202ENST00000393408 IGLV1-51P01701 117 aa13.27□□□□□ -0.29
CBX1-202ENST00000393408 GAGE6Q13070 117 aa13.27□□□□□ -0.29
CBX1-202ENST00000393408 LINC01006Q8NI28 216 aa13.27□□□□□ -0.29
CBX1-202ENST00000393408 TRGV4A0A0C4DH28 118 aa13.27□□□□□ -0.29
CBX1-202ENST00000393408 C2CD3Q4AC94 2353 aa13.26□□□□□ -0.29
CBX1-202ENST00000393408 PLA2G2AP14555 144 aa13.25□□□□□ -0.29
CBX1-202ENST00000393408 FAM218AQ96MZ4 157 aa13.25□□□□□ -0.29
CBX1-202ENST00000393408 IGLV4-60A0A075B6I1 120 aa13.24□□□□□ -0.29
CBX1-202ENST00000393408 FHL2Q14192 279 aa13.24□□□□□ -0.29
CBX1-202ENST00000393408 JMJD1CQ15652 2540 aa13.24□□□□□ -0.29
CBX1-202ENST00000393408 PF4P02776 101 aa13.24□□□□□ -0.29
CBX1-202ENST00000393408 FAM222AQ5U5X8 452 aa13.24□□□□□ -0.29
CBX1-202ENST00000393408 HIST2H2BCQ6DN03 193 aa13.24□□□□□ -0.29
CBX1-202ENST00000393408 MIR7-3HGQ8N6C7 128 aa13.24□□□□□ -0.29
CBX1-202ENST00000393408 C16orf95Q9H693 158 aa13.24□□□□□ -0.29
CBX1-202ENST00000393408 NIPBLQ6KC79 2804 aaeCLIP13.24□□□□□ -0.29
CBX1-202ENST00000393408 TRBV6-8A0A0A6YYG3 113 aa13.23□□□□□ -0.29
CBX1-202ENST00000393408 TRAV13-2A0A0B4J235 113 aa13.23□□□□□ -0.29
CBX1-202ENST00000393408 IGKV3OR2-268A0A0C4DH90 116 aa13.23□□□□□ -0.29
CBX1-202ENST00000393408 TOMM7Q9P0U1 55 aa13.23□□□□□ -0.29
CBX1-202ENST00000393408 RPL28P46779 137 aaKnown RBP13.22□□□□□ -0.29
CBX1-202ENST00000393408 C22orf24Q9Y442 160 aa13.22□□□□□ -0.29
CBX1-202ENST00000393408 CUBNO60494 3623 aa13.22□□□□□ -0.29
CBX1-202ENST00000393408 IGHV3OR16-9A0A0B4J2B5 98 aa13.22□□□□□ -0.29
CBX1-202ENST00000393408 ACYP1P07311 99 aa13.22□□□□□ -0.29
CBX1-202ENST00000393408 BAALC-AS2P0C853 105 aa13.22□□□□□ -0.29
CBX1-202ENST00000393408 LINC00337Q8N6G1 96 aa13.22□□□□□ -0.29
CBX1-202ENST00000393408 IGKV2-28A0A075B6P5 120 aa13.21□□□□□ -0.29
CBX1-202ENST00000393408 IGKV2D-28P01615 120 aa13.21□□□□□ -0.29
CBX1-202ENST00000393408 CRPP02741 224 aa13.21□□□□□ -0.29
CBX1-202ENST00000393408 RNASE1P07998 156 aaKnown RBP13.21□□□□□ -0.3
CBX1-202ENST00000393408 CHCHD5Q9BSY4 110 aa13.21□□□□□ -0.3
CBX1-202ENST00000393408 SND1-IT1Q9HBX3 110 aa13.21□□□□□ -0.3
CBX1-202ENST00000393408 FLNAP21333 2647 aaKnown RBP13.21□□□□□ -0.3
CBX1-202ENST00000393408 TRBV7-7A0A0K0K1E9 115 aa13.2□□□□□ -0.3
CBX1-202ENST00000393408 KRTAP1-1Q07627 177 aa13.19□□□□□ -0.3
CBX1-202ENST00000393408 A0A087WZ39 114 aa13.18□□□□□ -0.3
CBX1-202ENST00000393408 LINC00158P58513 81 aa13.18□□□□□ -0.3
CBX1-202ENST00000393408 NBPF19A0A087WUL8 3843 aa13.17□□□□□ -0.3
CBX1-202ENST00000393408 B5MCH6 92 aa13.17□□□□□ -0.3
CBX1-202ENST00000393408 CCDC179H3BU77 68 aa13.17□□□□□ -0.3
CBX1-202ENST00000393408 CCL18P55774 89 aa13.17□□□□□ -0.3
CBX1-202ENST00000393408 SETD2Q9BYW2 2564 aaPredicted RBP13.17□□□□□ -0.3
CBX1-202ENST00000393408 CCDC168Q8NDH2 2452 aa13.16□□□□□ -0.3
CBX1-202ENST00000393408 IBA57-AS1B1ANH7 110 aa13.16□□□□□ -0.3
CBX1-202ENST00000393408 C5orf38Q86SI9 138 aa13.15□□□□□ -0.3
CBX1-202ENST00000393408 SMCR5Q8TEV8 140 aa13.15□□□□□ -0.3
CBX1-202ENST00000393408 Q9HAA7 133 aa13.15□□□□□ -0.3
CBX1-202ENST00000393408 SMIM11BQ8TCY0 68 aa13.14□□□□□ -0.31
CBX1-202ENST00000393408 LINC00959A0A1B0GUT2 108 aa13.13□□□□□ -0.31
CBX1-202ENST00000393408 MALP21145 153 aa13.13□□□□□ -0.31
CBX1-202ENST00000393408 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
CBX1-202ENST00000393408 DEFB130BP0DP73 79 aa13.12□□□□□ -0.31
CBX1-202ENST00000393408 DEFB130AP0DP74 79 aa13.12□□□□□ -0.31
CBX1-202ENST00000393408 SS18L2Q9UHA2 77 aa13.12□□□□□ -0.31
CBX1-202ENST00000393408 LINC00612Q8N6U2 182 aa13.12□□□□□ -0.31
CBX1-202ENST00000393408 KIR2DL5BQ8NHK3 375 aa13.12□□□□□ -0.31
CBX1-202ENST00000393408 INAFM2P0DMQ5 153 aa13.11□□□□□ -0.31
CBX1-202ENST00000393408 PFN2P35080 140 aa13.11□□□□□ -0.31
CBX1-202ENST00000393408 IMUPQ9GZP8 106 aa13.11□□□□□ -0.31
CBX1-202ENST00000393408 A0A087WYN8 130 aa13.11□□□□□ -0.31
CBX1-202ENST00000393408 LINC00643Q86TS7 51 aa13.11□□□□□ -0.31
CBX1-202ENST00000393408 H0YGX0 51 aa13.09□□□□□ -0.31
CBX1-202ENST00000393408 GYPEP15421 78 aa13.09□□□□□ -0.31
CBX1-202ENST00000393408 TENM4Q6N022 2769 aa13.09□□□□□ -0.31
CBX1-202ENST00000393408 DNAL4O96015 105 aa13.08□□□□□ -0.32
CBX1-202ENST00000393408 C6orf226Q5I0X4 101 aa13.08□□□□□ -0.32
CBX1-202ENST00000393408 PAX4O43316 350 aa13.07□□□□□ -0.32
CBX1-202ENST00000393408 ANK3Q12955 4377 aaKnown RBP13.07□□□□□ -0.32
CBX1-202ENST00000393408 PDZD2O15018 2839 aa13.07□□□□□ -0.32
CBX1-202ENST00000393408 A0A1B0GUV1 79 aa13.07□□□□□ -0.32
CBX1-202ENST00000393408 C11orf68Q9H3H3 251 aaKnown RBP13.07□□□□□ -0.32
CBX1-202ENST00000393408 XCL1P47992 114 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms