RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 LINC00242Q5T6M2 205 aa16.81■□□□□ 0.28
PICALM-202ENST00000393346 FAM19A3Q7Z5A8 133 aa16.81■□□□□ 0.28
PICALM-202ENST00000393346 CITED1Q99966 193 aa16.81■□□□□ 0.28
PICALM-202ENST00000393346 DAND5Q8N907 189 aa16.8■□□□□ 0.28
PICALM-202ENST00000393346 STAB1Q9NY15 2570 aa16.8■□□□□ 0.28
PICALM-202ENST00000393346 CSDC2Q9Y534 153 aaKnown RBP16.8■□□□□ 0.28
PICALM-202ENST00000393346 TRBV10-1A0A0K0K1A3 114 aa16.79■□□□□ 0.28
PICALM-202ENST00000393346 TEX49A0A1B0GTD5 131 aa16.79■□□□□ 0.28
PICALM-202ENST00000393346 H7C423 109 aa16.79■□□□□ 0.28
PICALM-202ENST00000393346 LINC00694P0DN24 101 aa16.79■□□□□ 0.28
PICALM-202ENST00000393346 RPL36AP83881 106 aaKnown RBP16.79■□□□□ 0.28
PICALM-202ENST00000393346 C2orf82Q6UX34 121 aa16.79■□□□□ 0.28
PICALM-202ENST00000393346 RPL36ALQ969Q0 106 aaKnown RBP16.79■□□□□ 0.28
PICALM-202ENST00000393346 H3BT86 120 aa16.78■□□□□ 0.28
PICALM-202ENST00000393346 K7EQD1 137 aa16.78■□□□□ 0.28
PICALM-202ENST00000393346 UBE2WQ96B02 151 aa16.78■□□□□ 0.28
PICALM-202ENST00000393346 Q9H8V8 135 aa16.78■□□□□ 0.28
PICALM-202ENST00000393346 LST1O00453 97 aa16.77■□□□□ 0.28
PICALM-202ENST00000393346 DAZ2Q13117 558 aaKnown RBP16.77■□□□□ 0.28
PICALM-202ENST00000393346 DAZ4Q86SG3 579 aaKnown RBP16.77■□□□□ 0.28
PICALM-202ENST00000393346 SPATA3Q8NHX4 192 aa16.77■□□□□ 0.28
PICALM-202ENST00000393346 DAZ3Q9NR90 486 aaKnown RBP16.77■□□□□ 0.28
PICALM-202ENST00000393346 CLEC2BQ92478 149 aa16.76■□□□□ 0.27
PICALM-202ENST00000393346 NTM-AS1Q6ZSK4 140 aa16.76■□□□□ 0.27
PICALM-202ENST00000393346 LINC00308Q8TCZ7 52 aa16.75■□□□□ 0.27
PICALM-202ENST00000393346 Q6ZTI0 123 aa16.75■□□□□ 0.27
PICALM-202ENST00000393346 TRAV4A0A0B4J268 109 aa16.74■□□□□ 0.27
PICALM-202ENST00000393346 SMIM1B2RUZ4 78 aa16.74■□□□□ 0.27
PICALM-202ENST00000393346 KRTAP24-1Q3LI83 254 aa16.74■□□□□ 0.27
PICALM-202ENST00000393346 WFDC10AQ9H1F0 79 aa16.74■□□□□ 0.27
PICALM-202ENST00000393346 TRAV8-4A0A0B4J246 113 aa16.73■□□□□ 0.27
PICALM-202ENST00000393346 CDC42SE2Q9NRR3 84 aa16.72■□□□□ 0.27
PICALM-202ENST00000393346 TRAV13-1A0A0B4J241 112 aa16.71■□□□□ 0.27
PICALM-202ENST00000393346 COPS9Q8WXC6 57 aa16.71■□□□□ 0.27
PICALM-202ENST00000393346 ZNF625Q96I27 306 aaPredicted RBP16.71■□□□□ 0.27
PICALM-202ENST00000393346 COL6A5A8TX70 2615 aa16.71■□□□□ 0.27
PICALM-202ENST00000393346 GAGE12JA6NER3 117 aa16.69■□□□□ 0.26
PICALM-202ENST00000393346 SNCGO76070 127 aa16.69■□□□□ 0.26
PICALM-202ENST00000393346 CMC4P56277 68 aaPredicted RBP16.69■□□□□ 0.26
PICALM-202ENST00000393346 GAGE4Q13068 117 aa16.69■□□□□ 0.26
PICALM-202ENST00000393346 GAGE5Q13069 117 aa16.69■□□□□ 0.26
PICALM-202ENST00000393346 F5H768 121 aa16.68■□□□□ 0.26
PICALM-202ENST00000393346 C19orf73Q9NVV2 129 aa16.68■□□□□ 0.26
PICALM-202ENST00000393346 PKD1L1Q8TDX9 2849 aa16.68■□□□□ 0.26
PICALM-202ENST00000393346 NOP10Q9NPE3 64 aaKnown RBP16.68■□□□□ 0.26
PICALM-202ENST00000393346 A0A0U1RRA0 63 aa16.67■□□□□ 0.26
PICALM-202ENST00000393346 PRIMA1Q86XR5 153 aa16.67■□□□□ 0.26
PICALM-202ENST00000393346 SOSTDC1Q6X4U4 206 aa16.67■□□□□ 0.26
PICALM-202ENST00000393346 FAM110AQ9BQ89 295 aa16.67■□□□□ 0.26
PICALM-202ENST00000393346 TRAV26-1A0A087WT03 109 aa16.66■□□□□ 0.26
PICALM-202ENST00000393346 DEFB121Q5J5C9 76 aa16.66■□□□□ 0.26
PICALM-202ENST00000393346 C9orf66Q5T8R8 295 aa16.66■□□□□ 0.26
PICALM-202ENST00000393346 HERV-K104P63124 156 aa16.65■□□□□ 0.26
PICALM-202ENST00000393346 GAGE2BQ13066 116 aa16.65■□□□□ 0.26
PICALM-202ENST00000393346 GAGE2EQ4V326 116 aa16.65■□□□□ 0.26
PICALM-202ENST00000393346 MEIG1Q5JSS6 88 aa16.65■□□□□ 0.26
PICALM-202ENST00000393346 GAGE2DQ9UEU5 116 aa16.65■□□□□ 0.26
PICALM-202ENST00000393346 TMEM243Q9BU79 118 aa16.64■□□□□ 0.25
PICALM-202ENST00000393346 UBE2L6O14933 153 aa16.64■□□□□ 0.25
PICALM-202ENST00000393346 GIG44P09565 113 aaPredicted RBP16.64■□□□□ 0.25
PICALM-202ENST00000393346 ANAPC13Q9BS18 74 aa16.64■□□□□ 0.25
PICALM-202ENST00000393346 COX7A2LO14548 114 aa16.63■□□□□ 0.25
PICALM-202ENST00000393346 SHISA2Q6UWI4 295 aa16.63■□□□□ 0.25
PICALM-202ENST00000393346 RPL35AP18077 110 aaKnown RBP16.63■□□□□ 0.25
PICALM-202ENST00000393346 C16orf74Q96GX8 76 aa16.63■□□□□ 0.25
PICALM-202ENST00000393346 PPDPFQ9H3Y8 114 aa16.62■□□□□ 0.25
PICALM-202ENST00000393346 PLAC8L1A1L4L8 177 aa16.62■□□□□ 0.25
PICALM-202ENST00000393346 Q6Q795 121 aa16.62■□□□□ 0.25
PICALM-202ENST00000393346 NBEAL2Q6ZNJ1 2754 aa16.61■□□□□ 0.25
PICALM-202ENST00000393346 C15orf53Q8NAA6 179 aa16.61■□□□□ 0.25
PICALM-202ENST00000393346 FAM240AA0A1B0GVK7 77 aa16.61■□□□□ 0.25
PICALM-202ENST00000393346 C3orf56Q8N813 242 aa16.6■□□□□ 0.25
PICALM-202ENST00000393346 TRGV2A0A075B6R0 118 aa16.59■□□□□ 0.25
PICALM-202ENST00000393346 TRBV6-4A0A1B0GX49 114 aa16.59■□□□□ 0.25
PICALM-202ENST00000393346 GAGE7O76087 117 aa16.59■□□□□ 0.25
PICALM-202ENST00000393346 GAGE12FP0CL80 117 aa16.59■□□□□ 0.25
PICALM-202ENST00000393346 GAGE12GP0CL81 117 aa16.59■□□□□ 0.25
PICALM-202ENST00000393346 GAGE12IP0CL82 117 aa16.59■□□□□ 0.25
PICALM-202ENST00000393346 MRPL23Q16540 153 aaKnown RBP16.58■□□□□ 0.25
PICALM-202ENST00000393346 WFDC9Q8NEX5 89 aa16.57■□□□□ 0.24
PICALM-202ENST00000393346 OVOL2Q9BRP0 275 aa16.57■□□□□ 0.24
PICALM-202ENST00000393346 LOC100131303A0A0U1RQF7 123 aa16.56■□□□□ 0.24
PICALM-202ENST00000393346 NDUFV3P56181 108 aaKnown RBP16.54■□□□□ 0.24
PICALM-202ENST00000393346 NHLRC4P0CG21 123 aaPredicted RBP16.54■□□□□ 0.24
PICALM-202ENST00000393346 CSNK1G2-AS1Q8NCQ2 148 aa16.54■□□□□ 0.24
PICALM-202ENST00000393346 TRACP01848 142 aa16.53■□□□□ 0.24
PICALM-202ENST00000393346 TTC32Q5I0X7 151 aa16.53■□□□□ 0.24
PICALM-202ENST00000393346 COX7B2Q8TF08 81 aa16.53■□□□□ 0.24
PICALM-202ENST00000393346 TRGV4A0A0C4DH28 118 aa16.52■□□□□ 0.24
PICALM-202ENST00000393346 GAGE6Q13070 117 aa16.51■□□□□ 0.23
PICALM-202ENST00000393346 CMYA5Q8N3K9 4069 aa16.5■□□□□ 0.23
PICALM-202ENST00000393346 TRAV13-2A0A0B4J235 113 aa16.5■□□□□ 0.23
PICALM-202ENST00000393346 TRBV6-8A0A0A6YYG3 113 aa16.48■□□□□ 0.23
PICALM-202ENST00000393346 FHL2Q14192 279 aa16.48■□□□□ 0.23
PICALM-202ENST00000393346 FAM222AQ5U5X8 452 aa16.48■□□□□ 0.23
PICALM-202ENST00000393346 ACYP1P07311 99 aa16.47■□□□□ 0.23
PICALM-202ENST00000393346 MIR7-3HGQ8N6C7 128 aa16.47■□□□□ 0.23
PICALM-202ENST00000393346 IGLV4-60A0A075B6I1 120 aa16.47■□□□□ 0.23
PICALM-202ENST00000393346 RPL28P46779 137 aaKnown RBP16.46■□□□□ 0.23
PICALM-202ENST00000393346 TOMM7Q9P0U1 55 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms