RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 OR10D4PQ8NGN7 298 aa8.74□□□□□ -1.01
USP44-202ENST00000393091 PRSS29PA6NIE9 313 aa8.73□□□□□ -1.01
USP44-202ENST00000393091 NDUFA6P56556 154 aa8.73□□□□□ -1.01
USP44-202ENST00000393091 CDPF1Q6NVV7 123 aa8.73□□□□□ -1.01
USP44-202ENST00000393091 FAM19A2Q8N3H0 131 aa8.73□□□□□ -1.01
USP44-202ENST00000393091 DNAH8Q96JB1 4490 aa8.73□□□□□ -1.01
USP44-202ENST00000393091 C15orf56Q8N910 161 aa8.73□□□□□ -1.01
USP44-202ENST00000393091 GAGE12HA6NDE8 117 aa8.72□□□□□ -1.01
USP44-202ENST00000393091 AKR1D1P51857 326 aa8.72□□□□□ -1.01
USP44-202ENST00000393091 CNBPP62633 177 aaKnown RBP8.72□□□□□ -1.01
USP44-202ENST00000393091 CFAP161Q6P656 301 aa8.72□□□□□ -1.01
USP44-202ENST00000393091 IGHV1-58A0A0C4DH39 117 aa8.72□□□□□ -1.01
USP44-202ENST00000393091 ODF1Q14990 250 aa8.72□□□□□ -1.01
USP44-202ENST00000393091 Q8N814 137 aa8.72□□□□□ -1.01
USP44-202ENST00000393091 IGKV2D-24A0A075B6R9 120 aa8.71□□□□□ -1.01
USP44-202ENST00000393091 PET117Q6UWS5 81 aa8.71□□□□□ -1.01
USP44-202ENST00000393091 IGHV3-64A0A075B6Q5 118 aa8.71□□□□□ -1.02
USP44-202ENST00000393091 COX6A2Q02221 97 aa8.71□□□□□ -1.02
USP44-202ENST00000393091 F8VRH5 84 aa8.7□□□□□ -1.02
USP44-202ENST00000393091 COX7A2LO14548 114 aa8.7□□□□□ -1.02
USP44-202ENST00000393091 RNF151Q2KHN1 245 aa8.7□□□□□ -1.02
USP44-202ENST00000393091 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
USP44-202ENST00000393091 Q9HAA7 133 aa8.7□□□□□ -1.02
USP44-202ENST00000393091 DYNC1H1Q14204 4646 aaKnown RBP8.7□□□□□ -1.02
USP44-202ENST00000393091 C2orf48Q96LS8 159 aa8.7□□□□□ -1.02
USP44-202ENST00000393091 IGLV5-39A0A0G2JS06 123 aa8.69□□□□□ -1.02
USP44-202ENST00000393091 TNP2Q05952 138 aa8.69□□□□□ -1.02
USP44-202ENST00000393091 MAP1LC3CQ9BXW4 147 aa8.69□□□□□ -1.02
USP44-202ENST00000393091 RNASE13Q5GAN3 156 aaKnown RBP8.69□□□□□ -1.02
USP44-202ENST00000393091 CLPSL2Q6UWE3 100 aa8.69□□□□□ -1.02
USP44-202ENST00000393091 C11orf86A6NJI1 115 aa8.69□□□□□ -1.02
USP44-202ENST00000393091 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
USP44-202ENST00000393091 HIST1H2BLQ99880 126 aa8.69□□□□□ -1.02
USP44-202ENST00000393091 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
USP44-202ENST00000393091 CHTOPQ9Y3Y2 248 aaKnown RBP8.69□□□□□ -1.02
USP44-202ENST00000393091 DNAH5Q8TE73 4624 aa8.68□□□□□ -1.02
USP44-202ENST00000393091 TRAV13-1A0A0B4J241 112 aa8.68□□□□□ -1.02
USP44-202ENST00000393091 PLNP26678 52 aa8.68□□□□□ -1.02
USP44-202ENST00000393091 APOMO95445 188 aa8.68□□□□□ -1.02
USP44-202ENST00000393091 USP17L23D6RBM5 183 aa8.67□□□□□ -1.02
USP44-202ENST00000393091 ZC2HC1BQ5TFG8 222 aa8.67□□□□□ -1.02
USP44-202ENST00000393091 A0A0J9YXV3 536 aa8.67□□□□□ -1.02
USP44-202ENST00000393091 ZNF22P17026 224 aaPredicted RBP8.67□□□□□ -1.02
USP44-202ENST00000393091 KIAA0087Q14695 138 aa8.67□□□□□ -1.02
USP44-202ENST00000393091 EREGO14944 169 aa8.67□□□□□ -1.02
USP44-202ENST00000393091 PRSS1P07477 247 aa8.67□□□□□ -1.02
USP44-202ENST00000393091 XCL1P47992 114 aa8.67□□□□□ -1.02
USP44-202ENST00000393091 WFDC2Q14508 124 aa8.67□□□□□ -1.02
USP44-202ENST00000393091 PSCAO43653 123 aa8.66□□□□□ -1.02
USP44-202ENST00000393091 Q8IZM0 81 aa8.66□□□□□ -1.02
USP44-202ENST00000393091 IGLV10-54A0A075B6I4 117 aa8.66□□□□□ -1.02
USP44-202ENST00000393091 SMIM1B2RUZ4 78 aa8.65□□□□□ -1.02
USP44-202ENST00000393091 S100A6P06703 90 aa8.65□□□□□ -1.02
USP44-202ENST00000393091 TMEM223A0PJW6 202 aa8.65□□□□□ -1.02
USP44-202ENST00000393091 C3orf79P0CE67 100 aa8.65□□□□□ -1.02
USP44-202ENST00000393091 H3BRM9 83 aa8.65□□□□□ -1.03
USP44-202ENST00000393091 CHAC1Q9BUX1 264 aa8.65□□□□□ -1.03
USP44-202ENST00000393091 MRPL35Q9NZE8 188 aaKnown RBP8.65□□□□□ -1.03
USP44-202ENST00000393091 CDKN2A-AS1Q9UH64 79 aa8.65□□□□□ -1.03
USP44-202ENST00000393091 SNRPEP62304 92 aaKnown RBP8.64□□□□□ -1.03
USP44-202ENST00000393091 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
USP44-202ENST00000393091 GEMIN7Q9H840 131 aaKnown RBP8.64□□□□□ -1.03
USP44-202ENST00000393091 DPM2O94777 84 aa8.63□□□□□ -1.03
USP44-202ENST00000393091 CXCL5P42830 114 aa8.63□□□□□ -1.03
USP44-202ENST00000393091 PKIGQ9Y2B9 76 aa8.63□□□□□ -1.03
USP44-202ENST00000393091 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
USP44-202ENST00000393091 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
USP44-202ENST00000393091 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
USP44-202ENST00000393091 IGKCP01834 107 aa8.61□□□□□ -1.03
USP44-202ENST00000393091 SLPIP03973 132 aa8.61□□□□□ -1.03
USP44-202ENST00000393091 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
USP44-202ENST00000393091 FABP4P15090 132 aa8.61□□□□□ -1.03
USP44-202ENST00000393091 MALP21145 153 aa8.61□□□□□ -1.03
USP44-202ENST00000393091 TRBV30A0A0K0K1B3 111 aa8.6□□□□□ -1.03
USP44-202ENST00000393091 S100A2P29034 98 aa8.6□□□□□ -1.03
USP44-202ENST00000393091 CIRBPQ14011 172 aaKnown RBP8.6□□□□□ -1.03
USP44-202ENST00000393091 LINC00469Q8N7U9 141 aa8.6□□□□□ -1.03
USP44-202ENST00000393091 C5orf38Q86SI9 138 aa8.6□□□□□ -1.03
USP44-202ENST00000393091 Q6ZSA8 131 aa8.59□□□□□ -1.03
USP44-202ENST00000393091 ORAOV1Q8WV07 137 aa8.59□□□□□ -1.03
USP44-202ENST00000393091 KRTAP10-2P60368 255 aa8.59□□□□□ -1.04
USP44-202ENST00000393091 C20orf202A1L168 122 aa8.58□□□□□ -1.04
USP44-202ENST00000393091 LEPROTO15243 131 aa8.58□□□□□ -1.04
USP44-202ENST00000393091 SPAG11BQ08648 103 aa8.58□□□□□ -1.04
USP44-202ENST00000393091 COX7B2Q8TF08 81 aa8.58□□□□□ -1.04
USP44-202ENST00000393091 E9PLD3 99 aa8.57□□□□□ -1.04
USP44-202ENST00000393091 ZNF625Q96I27 306 aaPredicted RBP8.57□□□□□ -1.04
USP44-202ENST00000393091 NMUP48645 174 aa8.57□□□□□ -1.04
USP44-202ENST00000393091 hDV102S1A0JD36 115 aa8.56□□□□□ -1.04
USP44-202ENST00000393091 ZNF561-AS1K7EIQ3 104 aa8.56□□□□□ -1.04
USP44-202ENST00000393091 NDUFA1O15239 70 aa8.55□□□□□ -1.04
USP44-202ENST00000393091 SYCNQ0VAF6 134 aa8.55□□□□□ -1.04
USP44-202ENST00000393091 PLEKHB2Q96CS7 222 aa8.55□□□□□ -1.04
USP44-202ENST00000393091 PKHD1P08F94 4074 aa8.55□□□□□ -1.04
USP44-202ENST00000393091 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.55□□□□□ -1.04
USP44-202ENST00000393091 SDIM1Q6ZPB5 146 aa8.55□□□□□ -1.04
USP44-202ENST00000393091 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
USP44-202ENST00000393091 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
USP44-202ENST00000393091 KRTDAPP60985 99 aa8.55□□□□□ -1.04
USP44-202ENST00000393091 COX17Q14061 63 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms