RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 KRTAP10-11P60412 298 aa14.01□□□□□ -0.17
PTPN11-202ENST00000392597 IGLL5B9A064 214 aa14.01□□□□□ -0.17
PTPN11-202ENST00000392597 K7EP34 96 aa14.01□□□□□ -0.17
PTPN11-202ENST00000392597 ATP5G1P05496 136 aa14.01□□□□□ -0.17
PTPN11-202ENST00000392597 NAA38Q9BRA0 125 aaKnown RBP14.01□□□□□ -0.17
PTPN11-202ENST00000392597 TEX48A0A1B0GUV7 120 aa13.99□□□□□ -0.17
PTPN11-202ENST00000392597 CELA1Q9UNI1 258 aa13.99□□□□□ -0.17
PTPN11-202ENST00000392597 NDUFA1O15239 70 aa13.98□□□□□ -0.17
PTPN11-202ENST00000392597 SMIM1B2RUZ4 78 aa13.97□□□□□ -0.17
PTPN11-202ENST00000392597 IGLV4-60A0A075B6I1 120 aa13.97□□□□□ -0.17
PTPN11-202ENST00000392597 TRAV26-1A0A087WT03 109 aa13.97□□□□□ -0.17
PTPN11-202ENST00000392597 A0A1B0GUV1 79 aa13.97□□□□□ -0.17
PTPN11-202ENST00000392597 F5H768 121 aa13.97□□□□□ -0.17
PTPN11-202ENST00000392597 TIMM17BO60830 172 aa13.97□□□□□ -0.17
PTPN11-202ENST00000392597 LITAFQ99732 161 aa13.97□□□□□ -0.17
PTPN11-202ENST00000392597 SPCS1Q9Y6A9 102 aa13.97□□□□□ -0.17
PTPN11-202ENST00000392597 RPL24P83731 157 aaKnown RBP13.96□□□□□ -0.17
PTPN11-202ENST00000392597 SPANXDQ9BXN6 97 aa13.96□□□□□ -0.17
PTPN11-202ENST00000392597 SPANXCQ9NY87 97 aa13.96□□□□□ -0.17
PTPN11-202ENST00000392597 G3V4G9 280 aa13.95□□□□□ -0.18
PTPN11-202ENST00000392597 NBEAL1Q6ZS30 2694 aa13.95□□□□□ -0.18
PTPN11-202ENST00000392597 NOTCH1P46531 2555 aa13.94□□□□□ -0.18
PTPN11-202ENST00000392597 CFC1BP0CG36 223 aa13.93□□□□□ -0.18
PTPN11-202ENST00000392597 CFC1P0CG37 223 aa13.93□□□□□ -0.18
PTPN11-202ENST00000392597 SH2D6Q7Z4S9 175 aa13.93□□□□□ -0.18
PTPN11-202ENST00000392597 MUSTN1Q8IVN3 82 aa13.93□□□□□ -0.18
PTPN11-202ENST00000392597 DNAH3Q8TD57 4116 aa13.92□□□□□ -0.18
PTPN11-202ENST00000392597 PGPEP1Q9NXJ5 209 aa13.92□□□□□ -0.18
PTPN11-202ENST00000392597 APOMO95445 188 aa13.91□□□□□ -0.18
PTPN11-202ENST00000392597 MIAQ16674 131 aa13.91□□□□□ -0.18
PTPN11-202ENST00000392597 A4D1N5 150 aa13.91□□□□□ -0.18
PTPN11-202ENST00000392597 RBX1P62877 108 aa13.91□□□□□ -0.18
PTPN11-202ENST00000392597 MRPL23Q16540 153 aaKnown RBP13.91□□□□□ -0.18
PTPN11-202ENST00000392597 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.9□□□□□ -0.18
PTPN11-202ENST00000392597 IGHV3OR16-9A0A0B4J2B5 98 aa13.89□□□□□ -0.19
PTPN11-202ENST00000392597 A0A0B4J2C4 111 aa13.89□□□□□ -0.19
PTPN11-202ENST00000392597 TMEM262E9PQX1 116 aa13.89□□□□□ -0.19
PTPN11-202ENST00000392597 CIRBPQ14011 172 aaKnown RBP13.89□□□□□ -0.19
PTPN11-202ENST00000392597 ADAMTSL4-AS1Q5T5F5 129 aa13.89□□□□□ -0.19
PTPN11-202ENST00000392597 KPRPQ5T749 579 aaPredicted RBP13.89□□□□□ -0.19
PTPN11-202ENST00000392597 Q9H8V8 135 aa13.89□□□□□ -0.19
PTPN11-202ENST00000392597 A0A096LPF7 62 aa13.89□□□□□ -0.19
PTPN11-202ENST00000392597 IFITM1P13164 125 aa13.89□□□□□ -0.19
PTPN11-202ENST00000392597 ZNF625Q96I27 306 aaPredicted RBP13.89□□□□□ -0.19
PTPN11-202ENST00000392597 PRO1854Q9UHT4 67 aa13.89□□□□□ -0.19
PTPN11-202ENST00000392597 LINC00959A0A1B0GUT2 108 aa13.88□□□□□ -0.19
PTPN11-202ENST00000392597 TSPAN13O95857 204 aa13.88□□□□□ -0.19
PTPN11-202ENST00000392597 HERV-K104P63124 156 aa13.88□□□□□ -0.19
PTPN11-202ENST00000392597 ICOSQ9Y6W8 199 aa13.88□□□□□ -0.19
PTPN11-202ENST00000392597 C11orf68Q9H3H3 251 aaKnown RBP13.87□□□□□ -0.19
PTPN11-202ENST00000392597 A0A087WZ39 114 aa13.87□□□□□ -0.19
PTPN11-202ENST00000392597 IGKV3OR2-268A0A0C4DH90 116 aa13.87□□□□□ -0.19
PTPN11-202ENST00000392597 PRSS2P07478 247 aa13.87□□□□□ -0.19
PTPN11-202ENST00000392597 HTN3P15516 51 aa13.85□□□□□ -0.19
PTPN11-202ENST00000392597 SS18Q15532 418 aa13.84□□□□□ -0.19
PTPN11-202ENST00000392597 LYRM7Q5U5X0 104 aa13.84□□□□□ -0.19
PTPN11-202ENST00000392597 COX7B2Q8TF08 81 aa13.84□□□□□ -0.19
PTPN11-202ENST00000392597 RETNQ9HD89 108 aa13.84□□□□□ -0.19
PTPN11-202ENST00000392597 LELP1Q5T871 98 aa13.83□□□□□ -0.2
PTPN11-202ENST00000392597 COPS9Q8WXC6 57 aa13.83□□□□□ -0.2
PTPN11-202ENST00000392597 H3BNG1 76 aa13.82□□□□□ -0.2
PTPN11-202ENST00000392597 EIF4EBP3O60516 100 aaPredicted RBP13.82□□□□□ -0.2
PTPN11-202ENST00000392597 IGHV3-33P01772 117 aa13.82□□□□□ -0.2
PTPN11-202ENST00000392597 LINC01561Q8N1V8 128 aa13.82□□□□□ -0.2
PTPN11-202ENST00000392597 SFTA2Q6UW10 78 aa13.8□□□□□ -0.2
PTPN11-202ENST00000392597 PPDPFQ9H3Y8 114 aa13.8□□□□□ -0.2
PTPN11-202ENST00000392597 ERG28Q9UKR5 140 aa13.79□□□□□ -0.2
PTPN11-202ENST00000392597 MEIG1Q5JSS6 88 aa13.78□□□□□ -0.2
PTPN11-202ENST00000392597 LOC107984156A0A0G2JMH3 177 aa13.78□□□□□ -0.2
PTPN11-202ENST00000392597 C5orf38Q86SI9 138 aa13.78□□□□□ -0.2
PTPN11-202ENST00000392597 ARL17AQ8IVW1 177 aa13.78□□□□□ -0.2
PTPN11-202ENST00000392597 LINC00308Q8TCZ7 52 aa13.78□□□□□ -0.2
PTPN11-202ENST00000392597 F8W1H4 67 aa13.77□□□□□ -0.21
PTPN11-202ENST00000392597 XCL1P47992 114 aa13.77□□□□□ -0.21
PTPN11-202ENST00000392597 LINC00269Q8N2A0 174 aa13.77□□□□□ -0.21
PTPN11-202ENST00000392597 H3BMG7 143 aa13.76□□□□□ -0.21
PTPN11-202ENST00000392597 DAND5Q8N907 189 aa13.76□□□□□ -0.21
PTPN11-202ENST00000392597 TOMM7Q9P0U1 55 aa13.76□□□□□ -0.21
PTPN11-202ENST00000392597 TRBV20-1A0A075B6N2 111 aa13.76□□□□□ -0.21
PTPN11-202ENST00000392597 ANGP03950 147 aaKnown RBP13.76□□□□□ -0.21
PTPN11-202ENST00000392597 PRB2P02812 416 aaPredicted RBP13.75□□□□□ -0.21
PTPN11-202ENST00000392597 NPC2P61916 151 aa13.75□□□□□ -0.21
PTPN11-202ENST00000392597 REG3AQ06141 175 aa13.75□□□□□ -0.21
PTPN11-202ENST00000392597 CD164L2Q6UWJ8 174 aa13.75□□□□□ -0.21
PTPN11-202ENST00000392597 CLPSL2Q6UWE3 100 aa13.74□□□□□ -0.21
PTPN11-202ENST00000392597 LYPD5Q6UWN5 251 aa13.74□□□□□ -0.21
PTPN11-202ENST00000392597 Q6ZTC4 211 aa13.74□□□□□ -0.21
PTPN11-202ENST00000392597 OCIAD2Q56VL3 154 aa13.73□□□□□ -0.21
PTPN11-202ENST00000392597 K7EIL1 84 aa13.72□□□□□ -0.21
PTPN11-202ENST00000392597 Q8IZM0 81 aa13.72□□□□□ -0.21
PTPN11-202ENST00000392597 A0A0J9YWU9 116 aa13.72□□□□□ -0.21
PTPN11-202ENST00000392597 IBA57-AS1B1ANH7 110 aa13.72□□□□□ -0.21
PTPN11-202ENST00000392597 Q8N3U1 123 aa13.72□□□□□ -0.21
PTPN11-202ENST00000392597 CHCHD10Q8WYQ3 142 aaPredicted RBP13.72□□□□□ -0.21
PTPN11-202ENST00000392597 TRBV30A0A0K0K1B3 111 aa13.71□□□□□ -0.21
PTPN11-202ENST00000392597 PSMB2P49721 201 aa13.71□□□□□ -0.21
PTPN11-202ENST00000392597 A0A0U1RRA0 63 aa13.7□□□□□ -0.22
PTPN11-202ENST00000392597 COX7A2LO14548 114 aa13.7□□□□□ -0.22
PTPN11-202ENST00000392597 SCGB1C2P0DMR2 95 aa13.7□□□□□ -0.22
PTPN11-202ENST00000392597 Q1RN00 199 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms