RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 HMGN4O00479 90 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 CTSGP08311 255 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 SAA2P0DJI9 122 aaPredicted RBP0.92□□□□□ -2.26
TRAV40-201ENST00000390467 IFI27P40305 119 aaPredicted RBP0.92□□□□□ -2.26
TRAV40-201ENST00000390467 ELOF1P60002 83 aaKnown RBP0.92□□□□□ -2.26
TRAV40-201ENST00000390467 PYDC2Q56P42 97 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 Q6ZTI0 123 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 BAGE3Q86Y29 109 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 BAGE2Q86Y30 109 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 PATE1Q8WXA2 126 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 FXYD6Q9H0Q3 95 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 CCL26Q9Y258 94 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 LENEPQ9Y5L5 61 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 ARL2-SNX15V9GYD0 113 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 SLIT2O94813 1529 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 CACNA1GO43497 2377 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 RALGAPBQ86X10 1494 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 NCOA6Q14686 2063 aaPredicted RBP0.92□□□□□ -2.26
TRAV40-201ENST00000390467 SIP14410 1827 aa0.92□□□□□ -2.26
TRAV40-201ENST00000390467 CEP192Q8TEP8 1941 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 MYOM1P52179 1685 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 TOP2BQ02880 1626 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 LEPROTL1O95214 131 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 ARMS2P0C7Q2 107 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 SPINT3P49223 89 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 SPAG11BQ08648 103 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 TPRXLQ17RH7 258 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 SPAG11AQ6PDA7 123 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 Q86TA4 180 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 C4orf3Q8WVX3 66 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 FAM103A1Q9BTL3 118 aaKnown RBP0.91□□□□□ -2.26
TRAV40-201ENST00000390467 ORMDL1Q9P0S3 153 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 TSC2P49815 1807 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 ARFGEF1Q9Y6D6 1849 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 ANKRD36A6QL64 1941 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 DIP2AQ14689 1571 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 CDC42BPGQ6DT37 1551 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 CROCC2H7BZ55 1655 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 COL4A5P29400 1685 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 CFAP43Q8NDM7 1665 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 PREX1Q8TCU6 1659 aa0.91□□□□□ -2.26
TRAV40-201ENST00000390467 UBR3Q6ZT12 1888 aa0.9□□□□□ -2.26
TRAV40-201ENST00000390467 EHBP1L1Q8N3D4 1523 aa0.9□□□□□ -2.26
TRAV40-201ENST00000390467 IFT172Q9UG01 1749 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 CRYBG1Q9Y4K1 1723 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 TNRC6BQ9UPQ9 1833 aaKnown RBP0.9□□□□□ -2.27
TRAV40-201ENST00000390467 IGKV3D-7A0A0C4DH55 119 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 IGKV3OR2-268A0A0C4DH90 116 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 A0A0G2JQZ4 141 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 TRBV6-5A0A0K0K1A5 114 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 D6R8Y8 96 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 H3BVH4 76 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 PPP1R17O96001 155 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 IGLV3-1P01715 115 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 CCL3L1P16619 93 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 HMGA1P17096 107 aaKnown RBP0.9□□□□□ -2.27
TRAV40-201ENST00000390467 PDE6GP18545 87 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 S100A3P33764 101 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 SSBP1Q04837 148 aaKnown RBP0.9□□□□□ -2.27
TRAV40-201ENST00000390467 GDF5OSQ5U4N7 250 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 ATP5EP2Q5VTU8 51 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 MUSTN1Q8IVN3 82 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 PPP1R1CQ8WVI7 109 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 AMELXQ99217 191 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 PLAC8Q9NZF1 115 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 LINC01558Q9Y6Z2 57 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 UGGT1Q9NYU2 1555 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 ZNF142P52746 1687 aaPredicted RBP0.9□□□□□ -2.27
TRAV40-201ENST00000390467 ALS2Q96Q42 1657 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 ABCA1O95477 2261 aa0.9□□□□□ -2.27
TRAV40-201ENST00000390467 NRXN2Q9P2S2 1712 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 ANKRD17O75179 2603 aaKnown RBP0.89□□□□□ -2.27
TRAV40-201ENST00000390467 CTTNBP2Q8WZ74 1663 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 ARHGEF5Q12774 1597 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 MAST1Q9Y2H9 1570 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 CEP170BQ9Y4F5 1589 aaPredicted RBP0.89□□□□□ -2.27
TRAV40-201ENST00000390467 NKTRP30414 1462 aaKnown RBP0.89□□□□□ -2.27
TRAV40-201ENST00000390467 ATP7BP35670 1465 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 TRBV7-4A0A0J9YYF1 115 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 F8VRH5 84 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 CCL18P55774 89 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 ATXN8Q156A1 80 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 FAM74A4Q5TZK3 123 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 DEFB132Q7Z7B7 95 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 ZNF563Q8TA94 476 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 SPACA4Q8TDM5 124 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 COX7B2Q8TF08 81 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 PRR15LQ9BU68 103 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 TTTY12Q9BZ98 90 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 GNG13Q9P2W3 67 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 SNURFQ9Y675 71 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 CACNA1CQ13936 2221 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 ZNF236Q9UL36 1845 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 PAPPAQ13219 1627 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 USP32Q8NFA0 1604 aa0.89□□□□□ -2.27
TRAV40-201ENST00000390467 LOC285556D6RIA3 1793 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 DLEC1Q9Y238 1755 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 VWDEQ8N2E2 1590 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 MRC1P22897 1456 aa0.88□□□□□ -2.27
TRAV40-201ENST00000390467 A0A087WVE0 104 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms