RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 IGHV3-53P01767 116 aa9.64□□□□□ -0.87
CCDC57-202ENST00000389641 MIR7-3HGQ8N6C7 128 aa9.64□□□□□ -0.87
CCDC57-202ENST00000389641 SERP2Q8N6R1 65 aa9.64□□□□□ -0.87
CCDC57-202ENST00000389641 A6NDX4 124 aa9.63□□□□□ -0.87
CCDC57-202ENST00000389641 GNLYP22749 145 aa9.63□□□□□ -0.87
CCDC57-202ENST00000389641 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
CCDC57-202ENST00000389641 SMIM11BQ8TCY0 68 aa9.63□□□□□ -0.87
CCDC57-202ENST00000389641 Q96MF0 132 aa9.63□□□□□ -0.87
CCDC57-202ENST00000389641 RBMY1BA6NDE4 496 aaKnown RBP9.62□□□□□ -0.87
CCDC57-202ENST00000389641 RBMY1EA6NEQ0 496 aaKnown RBP9.62□□□□□ -0.87
CCDC57-202ENST00000389641 LECT2O14960 151 aa9.62□□□□□ -0.87
CCDC57-202ENST00000389641 RBMY1DP0C7P1 496 aaKnown RBP9.62□□□□□ -0.87
CCDC57-202ENST00000389641 MXRA5Q9NR99 2828 aa9.62□□□□□ -0.87
CCDC57-202ENST00000389641 NBPF19A0A087WUL8 3843 aa9.62□□□□□ -0.87
CCDC57-202ENST00000389641 TRAV25A0A0B4J276 109 aa9.62□□□□□ -0.87
CCDC57-202ENST00000389641 RPS28P62857 69 aaKnown RBP9.62□□□□□ -0.87
CCDC57-202ENST00000389641 WNK1Q9H4A3 2382 aa9.62□□□□□ -0.87
CCDC57-202ENST00000389641 MYO9AB2RTY4 2548 aa9.62□□□□□ -0.87
CCDC57-202ENST00000389641 IGKV2-28A0A075B6P5 120 aa9.61□□□□□ -0.87
CCDC57-202ENST00000389641 IGHV4-61A0A0C4DH41 118 aa9.61□□□□□ -0.87
CCDC57-202ENST00000389641 IGKV2D-28P01615 120 aa9.61□□□□□ -0.87
CCDC57-202ENST00000389641 TMEM258P61165 79 aa9.61□□□□□ -0.87
CCDC57-202ENST00000389641 SND1-IT1Q9HBX3 110 aa9.61□□□□□ -0.87
CCDC57-202ENST00000389641 DOPEY1Q5JWR5 2465 aa9.61□□□□□ -0.87
CCDC57-202ENST00000389641 F5H768 121 aa9.61□□□□□ -0.87
CCDC57-202ENST00000389641 FHL2Q14192 279 aa9.61□□□□□ -0.87
CCDC57-202ENST00000389641 COPS9Q8WXC6 57 aa9.61□□□□□ -0.87
CCDC57-202ENST00000389641 UPK3BQ9BT76 320 aa9.61□□□□□ -0.87
CCDC57-202ENST00000389641 TRAV23DV6A0A075B6W5 121 aa9.6□□□□□ -0.87
CCDC57-202ENST00000389641 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
CCDC57-202ENST00000389641 LINC00158P58513 81 aa9.6□□□□□ -0.87
CCDC57-202ENST00000389641 ANKRD17O75179 2603 aaKnown RBP9.6□□□□□ -0.87
CCDC57-202ENST00000389641 NF1P21359 2839 aa9.6□□□□□ -0.87
CCDC57-202ENST00000389641 TRAV13-2A0A0B4J235 113 aa9.59□□□□□ -0.87
CCDC57-202ENST00000389641 PSMB8P28062 276 aa9.59□□□□□ -0.87
CCDC57-202ENST00000389641 ZNF415Q09FC8 603 aa9.59□□□□□ -0.87
CCDC57-202ENST00000389641 DEFB136Q30KP8 78 aa9.59□□□□□ -0.87
CCDC57-202ENST00000389641 TEX15Q9BXT5 2789 aa9.59□□□□□ -0.87
CCDC57-202ENST00000389641 PFN2P35080 140 aa9.59□□□□□ -0.87
CCDC57-202ENST00000389641 RPL36AP83881 106 aaKnown RBP9.59□□□□□ -0.87
CCDC57-202ENST00000389641 RPL36ALQ969Q0 106 aaKnown RBP9.59□□□□□ -0.87
CCDC57-202ENST00000389641 PRB1P04280 392 aa9.58□□□□□ -0.88
CCDC57-202ENST00000389641 JMJD1CQ15652 2540 aa9.58□□□□□ -0.88
CCDC57-202ENST00000389641 Q5XG85 94 aa9.58□□□□□ -0.88
CCDC57-202ENST00000389641 NTM-AS1Q6ZSK4 140 aa9.58□□□□□ -0.88
CCDC57-202ENST00000389641 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
CCDC57-202ENST00000389641 ZNF469Q96JG9 3925 aaPredicted RBP9.57□□□□□ -0.88
CCDC57-202ENST00000389641 RNASE1P07998 156 aaKnown RBP9.57□□□□□ -0.88
CCDC57-202ENST00000389641 NAV2Q8IVL1 2488 aa9.57□□□□□ -0.88
CCDC57-202ENST00000389641 AVPP01185 164 aa9.57□□□□□ -0.88
CCDC57-202ENST00000389641 IGHV4-59P01825 116 aa9.57□□□□□ -0.88
CCDC57-202ENST00000389641 Q6JHZ5 121 aa9.57□□□□□ -0.88
CCDC57-202ENST00000389641 UBE2E2Q96LR5 201 aa9.56□□□□□ -0.88
CCDC57-202ENST00000389641 XCL2Q9UBD3 114 aa9.56□□□□□ -0.88
CCDC57-202ENST00000389641 TRGV1A0A0A0MS02 117 aa9.56□□□□□ -0.88
CCDC57-202ENST00000389641 GHRHP01286 108 aa9.56□□□□□ -0.88
CCDC57-202ENST00000389641 FAM19A1Q7Z5A9 133 aa9.56□□□□□ -0.88
CCDC57-202ENST00000389641 PAX4O43316 350 aa9.56□□□□□ -0.88
CCDC57-202ENST00000389641 C20orf197Q8N268 126 aa9.56□□□□□ -0.88
CCDC57-202ENST00000389641 CHD6Q8TD26 2715 aa9.55□□□□□ -0.88
CCDC57-202ENST00000389641 C18orf65Q6ZTR6 163 aa9.55□□□□□ -0.88
CCDC57-202ENST00000389641 C11orf72Q8NBR9 251 aa9.55□□□□□ -0.88
CCDC57-202ENST00000389641 NIPBLQ6KC79 2804 aaeCLIP9.55□□□□□ -0.882e-6■■■■□ 19.3
CCDC57-202ENST00000389641 SLURP1P55000 103 aa9.55□□□□□ -0.88
CCDC57-202ENST00000389641 CCL18P55774 89 aa9.55□□□□□ -0.88
CCDC57-202ENST00000389641 PRORYQ9H606 182 aa9.55□□□□□ -0.88
CCDC57-202ENST00000389641 CDC42SE2Q9NRR3 84 aa9.55□□□□□ -0.88
CCDC57-202ENST00000389641 ENHOQ6UWT2 76 aa9.53□□□□□ -0.88
CCDC57-202ENST00000389641 UCNP55089 124 aa9.53□□□□□ -0.88
CCDC57-202ENST00000389641 AKAP9Q99996 3911 aa9.53□□□□□ -0.88
CCDC57-202ENST00000389641 COX7B2Q8TF08 81 aa9.53□□□□□ -0.88
CCDC57-202ENST00000389641 KHDC1LQ5JSQ8 128 aa9.52□□□□□ -0.89
CCDC57-202ENST00000389641 ACANP16112 2415 aa9.52□□□□□ -0.89
CCDC57-202ENST00000389641 WIPF1O43516 503 aa9.52□□□□□ -0.89
CCDC57-202ENST00000389641 PF4P02776 101 aa9.52□□□□□ -0.89
CCDC57-202ENST00000389641 MAPK1IP1LQ8NDC0 245 aa9.52□□□□□ -0.89
CCDC57-202ENST00000389641 TMEM243Q9BU79 118 aa9.52□□□□□ -0.89
CCDC57-202ENST00000389641 UBE2L6O14933 153 aa9.51□□□□□ -0.89
CCDC57-202ENST00000389641 NOTCH2Q04721 2471 aa9.51□□□□□ -0.89
CCDC57-202ENST00000389641 TMEM89A2RUT3 159 aa9.5□□□□□ -0.89
CCDC57-202ENST00000389641 PRR3P79522 188 aaKnown RBP9.5□□□□□ -0.89
CCDC57-202ENST00000389641 Q6ZTI0 123 aa9.5□□□□□ -0.89
CCDC57-202ENST00000389641 H0YGX0 51 aa9.5□□□□□ -0.89
CCDC57-202ENST00000389641 SS18Q15532 418 aa9.5□□□□□ -0.89
CCDC57-202ENST00000389641 LOC100131303A0A0U1RQF7 123 aa9.5□□□□□ -0.89
CCDC57-202ENST00000389641 DEFB112Q30KQ8 113 aa9.5□□□□□ -0.89
CCDC57-202ENST00000389641 OBSCN-AS1Q96MR7 158 aa9.5□□□□□ -0.89
CCDC57-202ENST00000389641 MTORP42345 2549 aa9.49□□□□□ -0.89
CCDC57-202ENST00000389641 IGHV4-30-2A0A087WSY4 118 aa9.49□□□□□ -0.89
CCDC57-202ENST00000389641 OVOL2Q9BRP0 275 aa9.49□□□□□ -0.89
CCDC57-202ENST00000389641 ORMDL1Q9P0S3 153 aa9.48□□□□□ -0.89
CCDC57-202ENST00000389641 TENM4Q6N022 2769 aa9.47□□□□□ -0.89
CCDC57-202ENST00000389641 CCKP06307 115 aa9.47□□□□□ -0.89
CCDC57-202ENST00000389641 K7EQD1 137 aa9.47□□□□□ -0.89
CCDC57-202ENST00000389641 INSP01308 110 aa9.47□□□□□ -0.89
CCDC57-202ENST00000389641 MAP6D1Q9H9H5 199 aa9.47□□□□□ -0.89
CCDC57-202ENST00000389641 APCP25054 2843 aa9.46□□□□□ -0.9
CCDC57-202ENST00000389641 IGLV4-60A0A075B6I1 120 aa9.46□□□□□ -0.9
CCDC57-202ENST00000389641 FN1P02751 2386 aaKnown RBP9.46□□□□□ -0.9
CCDC57-202ENST00000389641 MSMBP08118 114 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms