RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 PRO1933Q9H354 126 aa0.54□□□□□ -2.32
RNU6-140P-201ENST00000384566 SPCS1Q9Y6A9 102 aa0.54□□□□□ -2.32
RNU6-140P-201ENST00000384566 PDCD11Q14690 1871 aaKnown RBP0.54□□□□□ -2.32
RNU6-140P-201ENST00000384566 ARHGEF12Q9NZN5 1544 aa0.54□□□□□ -2.32
RNU6-140P-201ENST00000384566 TTC37Q6PGP7 1564 aa0.53□□□□□ -2.32
RNU6-140P-201ENST00000384566 MARF1Q9Y4F3 1742 aaKnown RBP0.53□□□□□ -2.32
RNU6-140P-201ENST00000384566 H7BZZ5 65 aa0.53□□□□□ -2.32
RNU6-140P-201ENST00000384566 KRTAP2-3P0C7H8 128 aa0.53□□□□□ -2.32
RNU6-140P-201ENST00000384566 C10orf113Q5VZT2 155 aa0.53□□□□□ -2.32
RNU6-140P-201ENST00000384566 SERP2Q8N6R1 65 aa0.53□□□□□ -2.32
RNU6-140P-201ENST00000384566 KRTAP2-4Q9BYR9 128 aa0.53□□□□□ -2.32
RNU6-140P-201ENST00000384566 KRTAP2-1Q9BYU5 128 aa0.53□□□□□ -2.32
RNU6-140P-201ENST00000384566 PRO0255Q9UI72 69 aa0.53□□□□□ -2.32
RNU6-140P-201ENST00000384566 SMARCA2P51531 1590 aa0.53□□□□□ -2.33
RNU6-140P-201ENST00000384566 TRBV25-1A0A075B6N4 114 aa0.52□□□□□ -2.33
RNU6-140P-201ENST00000384566 UQCRHP07919 91 aa0.52□□□□□ -2.33
RNU6-140P-201ENST00000384566 PMCHL1Q16048 86 aa0.52□□□□□ -2.33
RNU6-140P-201ENST00000384566 LINC00846Q9NV44 126 aa0.52□□□□□ -2.33
RNU6-140P-201ENST00000384566 ZFHX3Q15911 3703 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 TRBV6-1A0A0K0K1D8 114 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 TRBV7-7A0A0K0K1E9 115 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 SYS1-DBNDD2H3BUS1 97 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 ASIPP42127 132 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 CLTCQ00610 1675 aaKnown RBP0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 PSMG4Q5JS54 123 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 C1orf167Q5SNV9 1468 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 ASXL3Q9C0F0 2248 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 TP53AIP1Q9HCN2 124 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 RAPGEF2Q9Y4G8 1499 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 BIVM-ERCC5R4GMW8 1640 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 MEGF8Q7Z7M0 2845 aa0.51□□□□□ -2.33
RNU6-140P-201ENST00000384566 CACNA1CQ13936 2221 aa0.5□□□□□ -2.33
RNU6-140P-201ENST00000384566 MYO7BQ6PIF6 2116 aa0.5□□□□□ -2.33
RNU6-140P-201ENST00000384566 BAZ1AQ9NRL2 1556 aaPredicted RBP0.5□□□□□ -2.33
RNU6-140P-201ENST00000384566 ABCC2Q92887 1545 aa0.5□□□□□ -2.33
RNU6-140P-201ENST00000384566 PLEKHH2Q8IVE3 1493 aa0.5□□□□□ -2.33
RNU6-140P-201ENST00000384566 FAUP35544 74 aaKnown RBP0.5□□□□□ -2.33
RNU6-140P-201ENST00000384566 PAPPAQ13219 1627 aa0.49□□□□□ -2.33
RNU6-140P-201ENST00000384566 CACNA1HO95180 2353 aa0.49□□□□□ -2.33
RNU6-140P-201ENST00000384566 EPRSP07814 1512 aaKnown RBP0.49□□□□□ -2.33
RNU6-140P-201ENST00000384566 A0A087WVE0 104 aa0.49□□□□□ -2.33
RNU6-140P-201ENST00000384566 UQCRHLA0A096LP55 91 aa0.49□□□□□ -2.33
RNU6-140P-201ENST00000384566 C7orf77A4D0Y5 90 aa0.49□□□□□ -2.33
RNU6-140P-201ENST00000384566 FDCSPQ8NFU4 85 aa0.49□□□□□ -2.33
RNU6-140P-201ENST00000384566 LINC01600Q96MT4 127 aa0.49□□□□□ -2.33
RNU6-140P-201ENST00000384566 XRN1Q8IZH2 1706 aaKnown RBP0.49□□□□□ -2.33
RNU6-140P-201ENST00000384566 TNCP24821 2201 aa0.49□□□□□ -2.33
RNU6-140P-201ENST00000384566 TTC28Q96AY4 2481 aa0.48□□□□□ -2.33
RNU6-140P-201ENST00000384566 FANCAO15360 1455 aa0.48□□□□□ -2.33
RNU6-140P-201ENST00000384566 POLA1P09884 1462 aaPredicted RBP0.48□□□□□ -2.33
RNU6-140P-201ENST00000384566 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
RNU6-140P-201ENST00000384566 I3L2K1 104 aa0.48□□□□□ -2.33
RNU6-140P-201ENST00000384566 PIGYQ3MUY2 71 aa0.48□□□□□ -2.33
RNU6-140P-201ENST00000384566 KRTAP5-10Q6L8G5 202 aa0.48□□□□□ -2.33
RNU6-140P-201ENST00000384566 Q8IZM0 81 aa0.48□□□□□ -2.33
RNU6-140P-201ENST00000384566 Q9H521 79 aa0.48□□□□□ -2.33
RNU6-140P-201ENST00000384566 GYPAP02724 150 aa0.47□□□□□ -2.33
RNU6-140P-201ENST00000384566 Q5BKY6 102 aa0.47□□□□□ -2.33
RNU6-140P-201ENST00000384566 LCN9Q8WX39 176 aa0.47□□□□□ -2.33
RNU6-140P-201ENST00000384566 TULP4Q9NRJ4 1543 aa0.47□□□□□ -2.33
RNU6-140P-201ENST00000384566 FAM208BQ5VWN6 2430 aa0.47□□□□□ -2.33
RNU6-140P-201ENST00000384566 NLRP1Q9C000 1473 aa0.47□□□□□ -2.33
RNU6-140P-201ENST00000384566 NRXN1Q9ULB1 1477 aa0.47□□□□□ -2.33
RNU6-140P-201ENST00000384566 A0A0G2JMZ2 1700 aa0.47□□□□□ -2.33
RNU6-140P-201ENST00000384566 MON2Q7Z3U7 1717 aa0.47□□□□□ -2.33
RNU6-140P-201ENST00000384566 TRBV7-4A0A0J9YYF1 115 aa0.46□□□□□ -2.34
RNU6-140P-201ENST00000384566 H3BQF6 201 aa0.46□□□□□ -2.34
RNU6-140P-201ENST00000384566 V9GYS6 101 aa0.46□□□□□ -2.34
RNU6-140P-201ENST00000384566 ATP10BO94823 1461 aa0.46□□□□□ -2.34
RNU6-140P-201ENST00000384566 SHPRHQ149N8 1683 aa0.46□□□□□ -2.34
RNU6-140P-201ENST00000384566 NHSL1Q5SYE7 1610 aa0.46□□□□□ -2.34
RNU6-140P-201ENST00000384566 KNDC1Q76NI1 1749 aa0.45□□□□□ -2.34
RNU6-140P-201ENST00000384566 ARMS2P0C7Q2 107 aa0.45□□□□□ -2.34
RNU6-140P-201ENST00000384566 ETDBQ3ZM63 59 aa0.45□□□□□ -2.34
RNU6-140P-201ENST00000384566 ZNF720Q7Z2F6 126 aa0.45□□□□□ -2.34
RNU6-140P-201ENST00000384566 IQSEC2Q5JU85 1478 aa0.45□□□□□ -2.34
RNU6-140P-201ENST00000384566 TARBP1Q13395 1621 aaKnown RBP0.45□□□□□ -2.34
RNU6-140P-201ENST00000384566 PAPPA2Q9BXP8 1791 aa0.45□□□□□ -2.34
RNU6-140P-201ENST00000384566 KIAA1551Q9HCM1 1747 aa0.44□□□□□ -2.34
RNU6-140P-201ENST00000384566 LINC00959A0A1B0GUT2 108 aa0.44□□□□□ -2.34
RNU6-140P-201ENST00000384566 SPINK1P00995 79 aa0.44□□□□□ -2.34
RNU6-140P-201ENST00000384566 HMGN3Q15651 99 aa0.44□□□□□ -2.34
RNU6-140P-201ENST00000384566 CEP162Q5TB80 1403 aa0.44□□□□□ -2.34
RNU6-140P-201ENST00000384566 RGPD4Q7Z3J3 1758 aa0.44□□□□□ -2.34
RNU6-140P-201ENST00000384566 SETBP1Q9Y6X0 1596 aa0.44□□□□□ -2.34
RNU6-140P-201ENST00000384566 ABCC3O15438 1527 aa0.43□□□□□ -2.34
RNU6-140P-201ENST00000384566 MYO3AQ8NEV4 1616 aa0.43□□□□□ -2.34
RNU6-140P-201ENST00000384566 FXYD6-FXYD2A0A087WZ82 144 aa0.43□□□□□ -2.34
RNU6-140P-201ENST00000384566 H0Y9P7 68 aa0.43□□□□□ -2.34
RNU6-140P-201ENST00000384566 GNG2P59768 71 aa0.43□□□□□ -2.34
RNU6-140P-201ENST00000384566 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
RNU6-140P-201ENST00000384566 DEFB107AQ8IZN7 70 aa0.43□□□□□ -2.34
RNU6-140P-201ENST00000384566 DEFB123Q8N688 67 aa0.43□□□□□ -2.34
RNU6-140P-201ENST00000384566 C20orf78Q9BR46 151 aa0.43□□□□□ -2.34
RNU6-140P-201ENST00000384566 CACNA1EQ15878 2313 aa0.42□□□□□ -2.34
RNU6-140P-201ENST00000384566 RB1CC1Q8TDY2 1594 aa0.42□□□□□ -2.34
RNU6-140P-201ENST00000384566 AHCTF1Q8WYP5 2266 aa0.42□□□□□ -2.34
RNU6-140P-201ENST00000384566 F8WEM9 126 aa0.42□□□□□ -2.34
RNU6-140P-201ENST00000384566 WFDC2Q14508 124 aa0.42□□□□□ -2.34
RNU6-140P-201ENST00000384566 C5P01031 1676 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms