RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 COX7B2Q8TF08 81 aa8.99□□□□□ -0.97
CDX2-201ENST00000381020 KLK12Q9UKR0 248 aa8.99□□□□□ -0.97
CDX2-201ENST00000381020 TRBV6-8A0A0A6YYG3 113 aa8.99□□□□□ -0.97
CDX2-201ENST00000381020 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
CDX2-201ENST00000381020 CHCHD7Q9BUK0 85 aa8.99□□□□□ -0.97
CDX2-201ENST00000381020 NOTCH1P46531 2555 aa8.98□□□□□ -0.97
CDX2-201ENST00000381020 TRAV8-4A0A0B4J246 113 aa8.98□□□□□ -0.97
CDX2-201ENST00000381020 FHL3Q13643 280 aa8.98□□□□□ -0.97
CDX2-201ENST00000381020 GAGE12HA6NDE8 117 aa8.98□□□□□ -0.97
CDX2-201ENST00000381020 MIR7-3HGQ8N6C7 128 aa8.98□□□□□ -0.97
CDX2-201ENST00000381020 LINC00269Q8N2A0 174 aa8.97□□□□□ -0.97
CDX2-201ENST00000381020 UBE2D3P61077 147 aa8.97□□□□□ -0.97
CDX2-201ENST00000381020 UBE2D2P62837 147 aa8.97□□□□□ -0.97
CDX2-201ENST00000381020 SPENQ96T58 3664 aaKnown RBP8.97□□□□□ -0.97
CDX2-201ENST00000381020 IGHV4-28A0A0C4DH34 117 aa8.97□□□□□ -0.97
CDX2-201ENST00000381020 COL6A5A8TX70 2615 aa8.96□□□□□ -0.97
CDX2-201ENST00000381020 Q9HAA7 133 aa8.96□□□□□ -0.97
CDX2-201ENST00000381020 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.97
CDX2-201ENST00000381020 LINC01546A6NGU7 62 aa8.96□□□□□ -0.97
CDX2-201ENST00000381020 BEAN1Q3B7T3 259 aa8.96□□□□□ -0.97
CDX2-201ENST00000381020 CLEC2BQ92478 149 aa8.96□□□□□ -0.97
CDX2-201ENST00000381020 MRPS36P82909 103 aaKnown RBP8.96□□□□□ -0.98
CDX2-201ENST00000381020 ICOSQ9Y6W8 199 aa8.96□□□□□ -0.98
CDX2-201ENST00000381020 MXRA5Q9NR99 2828 aa8.96□□□□□ -0.98
CDX2-201ENST00000381020 CR1P17927 2039 aa8.96□□□□□ -0.98
CDX2-201ENST00000381020 TCL1BO95988 128 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 PIK3CD-AS1Q5SR53 167 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 PPDPFLQ8WWR9 84 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 ZNF561-AS1K7EIQ3 104 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 PRB2P02812 416 aaPredicted RBP8.95□□□□□ -0.98
CDX2-201ENST00000381020 UBE2D1P51668 147 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 CARD19Q96LW7 228 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 IFITM1P13164 125 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 LINC00242Q5T6M2 205 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 COX7A2LO14548 114 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 CRYBA4P53673 196 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 HERV-K104P63124 156 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 COX6A2Q02221 97 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 MIAQ16674 131 aa8.95□□□□□ -0.98
CDX2-201ENST00000381020 STAB1Q9NY15 2570 aa8.94□□□□□ -0.98
CDX2-201ENST00000381020 RBX1P62877 108 aa8.94□□□□□ -0.98
CDX2-201ENST00000381020 SMIM9A6NGZ8 99 aa8.93□□□□□ -0.98
CDX2-201ENST00000381020 CDC42SE2Q9NRR3 84 aa8.93□□□□□ -0.98
CDX2-201ENST00000381020 IGHV4-30-4P0DP06 118 aa8.93□□□□□ -0.98
CDX2-201ENST00000381020 TIRAPP58753 221 aa8.93□□□□□ -0.98
CDX2-201ENST00000381020 IGLV4-60A0A075B6I1 120 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 IGKV2D-24A0A075B6R9 120 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 LYRM9A8MSI8 78 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 GAGE2BQ13066 116 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 DPH3Q96FX2 82 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 SPANXB1Q9NS25 103 aaPredicted RBP8.92□□□□□ -0.98
CDX2-201ENST00000381020 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 LINC01620Q4KN68 170 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 LINC00526Q96FQ7 95 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 AMELXQ99217 191 aa8.92□□□□□ -0.98
CDX2-201ENST00000381020 FHL2Q14192 279 aa8.91□□□□□ -0.98
CDX2-201ENST00000381020 EDA2RQ9HAV5 297 aa8.91□□□□□ -0.98
CDX2-201ENST00000381020 NBEAL1Q6ZS30 2694 aa8.91□□□□□ -0.98
CDX2-201ENST00000381020 TRAV13-2A0A0B4J235 113 aa8.91□□□□□ -0.98
CDX2-201ENST00000381020 ANKRD29Q8N6D5 301 aa8.91□□□□□ -0.98
CDX2-201ENST00000381020 REG3AQ06141 175 aa8.9□□□□□ -0.98
CDX2-201ENST00000381020 ANAPC13Q9BS18 74 aa8.9□□□□□ -0.98
CDX2-201ENST00000381020 RETNQ9HD89 108 aa8.9□□□□□ -0.98
CDX2-201ENST00000381020 ADAMTSL4-AS1Q5T5F5 129 aa8.9□□□□□ -0.98
CDX2-201ENST00000381020 GAGE2AQ6NT46 116 aa8.9□□□□□ -0.98
CDX2-201ENST00000381020 LINC00308Q8TCZ7 52 aa8.9□□□□□ -0.98
CDX2-201ENST00000381020 G3V4G9 280 aa8.9□□□□□ -0.99
CDX2-201ENST00000381020 NTM-AS1Q6ZSK4 140 aa8.9□□□□□ -0.99
CDX2-201ENST00000381020 SCGB1A1P11684 91 aa8.89□□□□□ -0.99
CDX2-201ENST00000381020 KRTAP1-1Q07627 177 aa8.89□□□□□ -0.99
CDX2-201ENST00000381020 NDUFA1O15239 70 aa8.89□□□□□ -0.99
CDX2-201ENST00000381020 TRIAP1O43715 76 aa8.88□□□□□ -0.99
CDX2-201ENST00000381020 MIFP14174 115 aa8.88□□□□□ -0.99
CDX2-201ENST00000381020 TEN1Q86WV5 123 aa8.88□□□□□ -0.99
CDX2-201ENST00000381020 CHCHD10Q8WYQ3 142 aaPredicted RBP8.88□□□□□ -0.99
CDX2-201ENST00000381020 A0A0B4J2C4 111 aa8.88□□□□□ -0.99
CDX2-201ENST00000381020 UBE2DNLQ8IWF7 75 aa8.88□□□□□ -0.99
CDX2-201ENST00000381020 SPAG11BQ08648 103 aa8.87□□□□□ -0.99
CDX2-201ENST00000381020 FOXI1Q12951 378 aa8.87□□□□□ -0.99
CDX2-201ENST00000381020 SMIM1B2RUZ4 78 aa8.87□□□□□ -0.99
CDX2-201ENST00000381020 CLUHP3Q96NS8 147 aa8.87□□□□□ -0.99
CDX2-201ENST00000381020 C1orf43Q9BWL3 253 aa8.87□□□□□ -0.99
CDX2-201ENST00000381020 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
CDX2-201ENST00000381020 UFSP1Q6NVU6 142 aa8.86□□□□□ -0.99
CDX2-201ENST00000381020 BAALC-AS2P0C853 105 aa8.86□□□□□ -0.99
CDX2-201ENST00000381020 KIR2DL5BQ8NHK3 375 aa8.86□□□□□ -0.99
CDX2-201ENST00000381020 HIGD2BQ4VC39 106 aa8.85□□□□□ -0.99
CDX2-201ENST00000381020 LAMTOR3Q9UHA4 124 aa8.85□□□□□ -0.99
CDX2-201ENST00000381020 CAMK2N2Q96S95 79 aa8.85□□□□□ -0.99
CDX2-201ENST00000381020 C11orf45Q8TAV5 145 aa8.85□□□□□ -0.99
CDX2-201ENST00000381020 OVOL2Q9BRP0 275 aa8.84□□□□□ -0.99
CDX2-201ENST00000381020 H7C423 109 aa8.84□□□□□ -0.99
CDX2-201ENST00000381020 PSCAO43653 123 aa8.83□□□□□ -1
CDX2-201ENST00000381020 DEFB131BA0A096LNP1 70 aa8.83□□□□□ -1
CDX2-201ENST00000381020 NCR3O14931 201 aa8.83□□□□□ -1
CDX2-201ENST00000381020 KRTAP10-3P60369 221 aa8.83□□□□□ -1
CDX2-201ENST00000381020 BSNQ9UPA5 3926 aa8.82□□□□□ -1
CDX2-201ENST00000381020 TEX49A0A1B0GTD5 131 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms