RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 TAX1BP3O14907 124 aa14.81□□□□□ -0.04
GMDS-202ENST00000380815 SPANXB1Q9NS25 103 aaPredicted RBP14.8□□□□□ -0.04
GMDS-202ENST00000380815 SMIM1B2RUZ4 78 aa14.8□□□□□ -0.04
GMDS-202ENST00000380815 ZFAND6Q6FIF0 208 aa14.8□□□□□ -0.04
GMDS-202ENST00000380815 LURAP1LQ8IV03 231 aa14.8□□□□□ -0.04
GMDS-202ENST00000380815 C10orf126Q8N4M7 172 aa14.8□□□□□ -0.04
GMDS-202ENST00000380815 COX11Q9Y6N1 276 aa14.8□□□□□ -0.04
GMDS-202ENST00000380815 IGKV3OR2-268A0A0C4DH90 116 aa14.79□□□□□ -0.04
GMDS-202ENST00000380815 PTTG1IPP53801 180 aa14.79□□□□□ -0.04
GMDS-202ENST00000380815 NANOS2P60321 138 aaKnown RBP14.79□□□□□ -0.04
GMDS-202ENST00000380815 SRSF9Q13242 221 aaKnown RBP eCLIP14.79□□□□□ -0.046e-7■■■□□ 15.3
GMDS-202ENST00000380815 NDUFA12Q9UI09 145 aa14.79□□□□□ -0.04
GMDS-202ENST00000380815 MRAPQ8TCY5 172 aa14.78□□□□□ -0.04
GMDS-202ENST00000380815 LINC00959A0A1B0GUT2 108 aa14.78□□□□□ -0.04
GMDS-202ENST00000380815 K7EP13 123 aa14.78□□□□□ -0.04
GMDS-202ENST00000380815 LYPD5Q6UWN5 251 aa14.77□□□□□ -0.05
GMDS-202ENST00000380815 Q6ZVH6 145 aa14.77□□□□□ -0.05
GMDS-202ENST00000380815 A0A0J9YXY3 114 aa14.76□□□□□ -0.05
GMDS-202ENST00000380815 DEFB131BA0A096LNP1 70 aa14.75□□□□□ -0.05
GMDS-202ENST00000380815 IGHV3OR16-9A0A0B4J2B5 98 aa14.75□□□□□ -0.05
GMDS-202ENST00000380815 CCL25O15444 150 aa14.75□□□□□ -0.05
GMDS-202ENST00000380815 NDUFA1O15239 70 aa14.74□□□□□ -0.05
GMDS-202ENST00000380815 SMIM13P0DJ93 91 aa14.74□□□□□ -0.05
GMDS-202ENST00000380815 SS18Q15532 418 aa14.74□□□□□ -0.05
GMDS-202ENST00000380815 TMEM238C9JI98 176 aa14.73□□□□□ -0.05
GMDS-202ENST00000380815 IGHV3-30P01768 117 aa14.73□□□□□ -0.05
GMDS-202ENST00000380815 IGHV3-30-5P0DP03 117 aa14.73□□□□□ -0.05
GMDS-202ENST00000380815 LINC00269Q8N2A0 174 aa14.73□□□□□ -0.05
GMDS-202ENST00000380815 NHP2Q9NX24 153 aaKnown RBP14.73□□□□□ -0.05
GMDS-202ENST00000380815 A0A087WZ39 114 aa14.72□□□□□ -0.05
GMDS-202ENST00000380815 ANGP03950 147 aaKnown RBP14.71□□□□□ -0.05
GMDS-202ENST00000380815 Q8N3U1 123 aa14.71□□□□□ -0.05
GMDS-202ENST00000380815 TMEM238LA0A1B0GVL6 79 aa14.7□□□□□ -0.06
GMDS-202ENST00000380815 A6NJY4 79 aa14.7□□□□□ -0.06
GMDS-202ENST00000380815 LITAFQ99732 161 aa14.7□□□□□ -0.06
GMDS-202ENST00000380815 A0A1B0GWB2 263 aa14.7□□□□□ -0.06
GMDS-202ENST00000380815 REG3AQ06141 175 aa14.7□□□□□ -0.06
GMDS-202ENST00000380815 C9orf118A6NHY6 69 aa14.69□□□□□ -0.06
GMDS-202ENST00000380815 CLPSL2Q6UWE3 100 aa14.69□□□□□ -0.06
GMDS-202ENST00000380815 Q9H8V8 135 aa14.69□□□□□ -0.06
GMDS-202ENST00000380815 K7ERJ3 54 aa14.68□□□□□ -0.06
GMDS-202ENST00000380815 TIMM17BO60830 172 aa14.68□□□□□ -0.06
GMDS-202ENST00000380815 TRAV10A0A0B4J240 114 aa14.68□□□□□ -0.06
GMDS-202ENST00000380815 XCL1P47992 114 aa14.68□□□□□ -0.06
GMDS-202ENST00000380815 RAB37Q96AX2 223 aa14.68□□□□□ -0.06
GMDS-202ENST00000380815 ZNF625Q96I27 306 aaPredicted RBP14.68□□□□□ -0.06
GMDS-202ENST00000380815 C5orf38Q86SI9 138 aa14.66□□□□□ -0.06
GMDS-202ENST00000380815 COX7B2Q8TF08 81 aa14.66□□□□□ -0.06
GMDS-202ENST00000380815 LINC01561Q8N1V8 128 aa14.65□□□□□ -0.06
GMDS-202ENST00000380815 SPANXDQ9BXN6 97 aa14.65□□□□□ -0.06
GMDS-202ENST00000380815 SPANXCQ9NY87 97 aa14.65□□□□□ -0.06
GMDS-202ENST00000380815 HERV-K104P63124 156 aa14.65□□□□□ -0.06
GMDS-202ENST00000380815 ADAMTSL4-AS1Q5T5F5 129 aa14.65□□□□□ -0.06
GMDS-202ENST00000380815 CD164L2Q6UWJ8 174 aa14.65□□□□□ -0.06
GMDS-202ENST00000380815 ESRGQ1W209 222 aa14.64□□□□□ -0.07
GMDS-202ENST00000380815 PRR34Q9NV39 138 aa14.64□□□□□ -0.07
GMDS-202ENST00000380815 CIRBPQ14011 172 aaKnown RBP14.63□□□□□ -0.07
GMDS-202ENST00000380815 CHCHD10Q8WYQ3 142 aaPredicted RBP14.63□□□□□ -0.07
GMDS-202ENST00000380815 H3BUT2 72 aa14.62□□□□□ -0.07
GMDS-202ENST00000380815 RPL24P83731 157 aaKnown RBP14.62□□□□□ -0.07
GMDS-202ENST00000380815 VAMP3Q15836 100 aa14.62□□□□□ -0.07
GMDS-202ENST00000380815 MIAQ16674 131 aa14.62□□□□□ -0.07
GMDS-202ENST00000380815 MUSTN1Q8IVN3 82 aa14.62□□□□□ -0.07
GMDS-202ENST00000380815 KLK12Q9UKR0 248 aa14.62□□□□□ -0.07
GMDS-202ENST00000380815 WFDC10BQ8IUB3 73 aa14.61□□□□□ -0.07
GMDS-202ENST00000380815 C15orf53Q8NAA6 179 aa14.61□□□□□ -0.07
GMDS-202ENST00000380815 B9D2Q9BPU9 175 aa14.61□□□□□ -0.07
GMDS-202ENST00000380815 TOMM7Q9P0U1 55 aa14.61□□□□□ -0.07
GMDS-202ENST00000380815 HUWE1Q7Z6Z7 4374 aaKnown RBP14.61□□□□□ -0.07
GMDS-202ENST00000380815 PRSS2P07478 247 aa14.6□□□□□ -0.07
GMDS-202ENST00000380815 IGLV10-54A0A075B6I4 117 aa14.59□□□□□ -0.07
GMDS-202ENST00000380815 A4D1N5 150 aa14.59□□□□□ -0.07
GMDS-202ENST00000380815 COX7A2LO14548 114 aa14.59□□□□□ -0.07
GMDS-202ENST00000380815 IGHV3-33P01772 117 aa14.59□□□□□ -0.07
GMDS-202ENST00000380815 IFITM1P13164 125 aa14.58□□□□□ -0.08
GMDS-202ENST00000380815 SFTA2Q6UW10 78 aa14.58□□□□□ -0.08
GMDS-202ENST00000380815 NAA38Q9BRA0 125 aaKnown RBP14.58□□□□□ -0.08
GMDS-202ENST00000380815 IGLL5B9A064 214 aa14.57□□□□□ -0.08
GMDS-202ENST00000380815 CFC1BP0CG36 223 aa14.57□□□□□ -0.08
GMDS-202ENST00000380815 CFC1P0CG37 223 aa14.57□□□□□ -0.08
GMDS-202ENST00000380815 UBE2V1Q13404 147 aa14.57□□□□□ -0.08
GMDS-202ENST00000380815 ENHOQ6UWT2 76 aa14.57□□□□□ -0.08
GMDS-202ENST00000380815 A0A1W2PPM0 123 aa14.57□□□□□ -0.08
GMDS-202ENST00000380815 APOMO95445 188 aa14.57□□□□□ -0.08
GMDS-202ENST00000380815 FOXI1Q12951 378 aa14.57□□□□□ -0.08
GMDS-202ENST00000380815 MEIG1Q5JSS6 88 aa14.56□□□□□ -0.08
GMDS-202ENST00000380815 Q8IZM0 81 aa14.56□□□□□ -0.08
GMDS-202ENST00000380815 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.55□□□□□ -0.08
GMDS-202ENST00000380815 TRAV8-4A0A0B4J246 113 aa14.55□□□□□ -0.08
GMDS-202ENST00000380815 CRPP02741 224 aa14.55□□□□□ -0.08
GMDS-202ENST00000380815 C6orf226Q5I0X4 101 aa14.55□□□□□ -0.08
GMDS-202ENST00000380815 FABP2P12104 132 aa14.54□□□□□ -0.08
GMDS-202ENST00000380815 DAND5Q8N907 189 aa14.54□□□□□ -0.08
GMDS-202ENST00000380815 A0A0B4J2C4 111 aa14.53□□□□□ -0.08
GMDS-202ENST00000380815 MALP21145 153 aa14.53□□□□□ -0.08
GMDS-202ENST00000380815 LINC01556Q5JQF7 62 aa14.53□□□□□ -0.08
GMDS-202ENST00000380815 UBE2WQ96B02 151 aa14.53□□□□□ -0.08
GMDS-202ENST00000380815 GAGE12HA6NDE8 117 aa14.52□□□□□ -0.08
GMDS-202ENST00000380815 COPS9Q8WXC6 57 aa14.52□□□□□ -0.08
GMDS-202ENST00000380815 PGPEP1Q9NXJ5 209 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms