RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 J3KT08 172 aa9.25□□□□□ -0.93
DNMT3A-204ENST00000380756 CHCHD10Q8WYQ3 142 aaPredicted RBP9.25□□□□□ -0.93
DNMT3A-204ENST00000380756 LOC100131303A0A0U1RQF7 123 aa9.24□□□□□ -0.93
DNMT3A-204ENST00000380756 ODF3L2Q3SX64 289 aa9.24□□□□□ -0.93
DNMT3A-204ENST00000380756 AMELXQ99217 191 aa9.24□□□□□ -0.93
DNMT3A-204ENST00000380756 CDC42SE2Q9NRR3 84 aa9.24□□□□□ -0.93
DNMT3A-204ENST00000380756 H3BQ85 93 aa9.24□□□□□ -0.93
DNMT3A-204ENST00000380756 NDUFA7O95182 113 aa9.24□□□□□ -0.93
DNMT3A-204ENST00000380756 RMI2Q96E14 147 aa9.24□□□□□ -0.93
DNMT3A-204ENST00000380756 WFDC10AQ9H1F0 79 aa9.24□□□□□ -0.93
DNMT3A-204ENST00000380756 ADAMTSL4-AS1Q5T5F5 129 aa9.24□□□□□ -0.93
DNMT3A-204ENST00000380756 LY6G6DO95868 133 aa9.23□□□□□ -0.93
DNMT3A-204ENST00000380756 CHCHD7Q9BUK0 85 aa9.23□□□□□ -0.93
DNMT3A-204ENST00000380756 CDH23Q9H251 3354 aa9.23□□□□□ -0.93
DNMT3A-204ENST00000380756 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
DNMT3A-204ENST00000380756 SMIM9A6NGZ8 99 aa9.23□□□□□ -0.93
DNMT3A-204ENST00000380756 IMUPQ9GZP8 106 aa9.23□□□□□ -0.93
DNMT3A-204ENST00000380756 USP24Q9UPU5 2620 aa9.22□□□□□ -0.93
DNMT3A-204ENST00000380756 ETDCA0A1B0GVM5 59 aa9.22□□□□□ -0.93
DNMT3A-204ENST00000380756 F8P00451 2351 aa9.22□□□□□ -0.93
DNMT3A-204ENST00000380756 TRAV23DV6A0A075B6W5 121 aa9.22□□□□□ -0.93
DNMT3A-204ENST00000380756 SMIM1B2RUZ4 78 aa9.22□□□□□ -0.93
DNMT3A-204ENST00000380756 PDE6GP18545 87 aa9.22□□□□□ -0.93
DNMT3A-204ENST00000380756 NREPQ16612 68 aa9.22□□□□□ -0.93
DNMT3A-204ENST00000380756 LINC00315P59091 139 aa9.21□□□□□ -0.93
DNMT3A-204ENST00000380756 PRUNE2Q8WUY3 3088 aa9.21□□□□□ -0.93
DNMT3A-204ENST00000380756 SHISA2Q6UWI4 295 aa9.21□□□□□ -0.93
DNMT3A-204ENST00000380756 LYRM9A8MSI8 78 aa9.21□□□□□ -0.94
DNMT3A-204ENST00000380756 C6orf99Q4VX62 202 aa9.21□□□□□ -0.94
DNMT3A-204ENST00000380756 LINC01006Q8NI28 216 aa9.21□□□□□ -0.94
DNMT3A-204ENST00000380756 SMIM11BQ8TCY0 68 aa9.2□□□□□ -0.94
DNMT3A-204ENST00000380756 FAM240AA0A1B0GVK7 77 aa9.2□□□□□ -0.94
DNMT3A-204ENST00000380756 CCDC179H3BU77 68 aa9.2□□□□□ -0.94
DNMT3A-204ENST00000380756 UBE2BP63146 152 aa9.19□□□□□ -0.94
DNMT3A-204ENST00000380756 LINC00959A0A1B0GUT2 108 aa9.19□□□□□ -0.94
DNMT3A-204ENST00000380756 LINC00694P0DN24 101 aa9.19□□□□□ -0.94
DNMT3A-204ENST00000380756 COX7BP24311 80 aa9.19□□□□□ -0.94
DNMT3A-204ENST00000380756 CCL18P55774 89 aa9.19□□□□□ -0.94
DNMT3A-204ENST00000380756 IGHV4-28A0A0C4DH34 117 aa9.19□□□□□ -0.94
DNMT3A-204ENST00000380756 COX6A2Q02221 97 aa9.19□□□□□ -0.94
DNMT3A-204ENST00000380756 Q6Q795 121 aa9.19□□□□□ -0.94
DNMT3A-204ENST00000380756 C3orf22Q8N5N4 141 aa9.19□□□□□ -0.94
DNMT3A-204ENST00000380756 Q6ZSN1 163 aa9.18□□□□□ -0.94
DNMT3A-204ENST00000380756 CENPEQ02224 2701 aa9.18□□□□□ -0.94
DNMT3A-204ENST00000380756 HIGD2BQ4VC39 106 aa9.18□□□□□ -0.94
DNMT3A-204ENST00000380756 LINC00482Q8N8I6 264 aa9.18□□□□□ -0.94
DNMT3A-204ENST00000380756 TRIOO75962 3097 aa9.17□□□□□ -0.94
DNMT3A-204ENST00000380756 UPK3BQ9BT76 320 aa9.17□□□□□ -0.94
DNMT3A-204ENST00000380756 C1orf158Q8N1D5 194 aa9.17□□□□□ -0.94
DNMT3A-204ENST00000380756 CDK2AP2O75956 126 aa9.17□□□□□ -0.94
DNMT3A-204ENST00000380756 C20orf197Q8N268 126 aa9.17□□□□□ -0.94
DNMT3A-204ENST00000380756 CLUHP3Q96NS8 147 aa9.17□□□□□ -0.94
DNMT3A-204ENST00000380756 XAGE1AQ9HD64 81 aa9.17□□□□□ -0.94
DNMT3A-204ENST00000380756 MUC4Q99102 2169 aa9.17□□□□□ -0.94
DNMT3A-204ENST00000380756 CD164L2Q6UWJ8 174 aa9.16□□□□□ -0.94
DNMT3A-204ENST00000380756 BEAN1Q3B7T3 259 aa9.16□□□□□ -0.94
DNMT3A-204ENST00000380756 FAM19A4Q96LR4 140 aa9.16□□□□□ -0.94
DNMT3A-204ENST00000380756 CDIP1Q9H305 208 aa9.16□□□□□ -0.94
DNMT3A-204ENST00000380756 XIRP2A4UGR9 3374 aa9.16□□□□□ -0.94
DNMT3A-204ENST00000380756 ATP5EP2Q5VTU8 51 aa9.15□□□□□ -0.94
DNMT3A-204ENST00000380756 CSDC2Q9Y534 153 aaKnown RBP9.15□□□□□ -0.94
DNMT3A-204ENST00000380756 PRO0461Q9UI25 63 aa9.15□□□□□ -0.94
DNMT3A-204ENST00000380756 SMCPP49901 116 aaPredicted RBP9.15□□□□□ -0.94
DNMT3A-204ENST00000380756 TMEM258P61165 79 aa9.15□□□□□ -0.95
DNMT3A-204ENST00000380756 ENHOQ6UWT2 76 aa9.15□□□□□ -0.95
DNMT3A-204ENST00000380756 USP17L23D6RBM5 183 aa9.13□□□□□ -0.95
DNMT3A-204ENST00000380756 LINC00526Q96FQ7 95 aa9.13□□□□□ -0.95
DNMT3A-204ENST00000380756 RPL28P46779 137 aaKnown RBP9.13□□□□□ -0.95
DNMT3A-204ENST00000380756 KRTAP10-9P60411 292 aa9.13□□□□□ -0.95
DNMT3A-204ENST00000380756 IGLV4-60A0A075B6I1 120 aa9.12□□□□□ -0.95
DNMT3A-204ENST00000380756 Q6ZQY7 126 aa9.12□□□□□ -0.95
DNMT3A-204ENST00000380756 Q8IZM0 81 aa9.12□□□□□ -0.95
DNMT3A-204ENST00000380756 M0QXV9 152 aa9.11□□□□□ -0.95
DNMT3A-204ENST00000380756 SERP2Q8N6R1 65 aa9.11□□□□□ -0.95
DNMT3A-204ENST00000380756 A0A087WZ39 114 aa9.11□□□□□ -0.95
DNMT3A-204ENST00000380756 MIFP14174 115 aa9.11□□□□□ -0.95
DNMT3A-204ENST00000380756 COL27A1Q8IZC6 1860 aaPredicted RBP9.11□□□□□ -0.95
DNMT3A-204ENST00000380756 COX7CP15954 63 aa9.11□□□□□ -0.95
DNMT3A-204ENST00000380756 ATRQ13535 2644 aa9.1□□□□□ -0.95
DNMT3A-204ENST00000380756 HECTD1Q9ULT8 2610 aa9.09□□□□□ -0.95
DNMT3A-204ENST00000380756 BPY2O14599 106 aa9.09□□□□□ -0.95
DNMT3A-204ENST00000380756 SCXQ7RTU7 201 aa9.09□□□□□ -0.95
DNMT3A-204ENST00000380756 KLK9Q2XQG4 91 aa9.09□□□□□ -0.95
DNMT3A-204ENST00000380756 IGLV1-51P01701 117 aa9.08□□□□□ -0.96
DNMT3A-204ENST00000380756 IL17DQ8TAD2 202 aa9.08□□□□□ -0.96
DNMT3A-204ENST00000380756 WDFY4Q6ZS81 3184 aa9.08□□□□□ -0.96
DNMT3A-204ENST00000380756 PRB2P02812 416 aaPredicted RBP9.08□□□□□ -0.96
DNMT3A-204ENST00000380756 C11orf72Q8NBR9 251 aa9.07□□□□□ -0.96
DNMT3A-204ENST00000380756 HILS1P60008 231 aa9.07□□□□□ -0.96
DNMT3A-204ENST00000380756 COX17Q14061 63 aa9.07□□□□□ -0.96
DNMT3A-204ENST00000380756 Q6JHZ5 121 aa9.07□□□□□ -0.96
DNMT3A-204ENST00000380756 Q9UF83 564 aa9.06□□□□□ -0.96
DNMT3A-204ENST00000380756 VPS13AQ96RL7 3174 aa9.06□□□□□ -0.96
DNMT3A-204ENST00000380756 FHL2Q14192 279 aa9.06□□□□□ -0.96
DNMT3A-204ENST00000380756 LELP1Q5T871 98 aa9.06□□□□□ -0.96
DNMT3A-204ENST00000380756 A0A087WYN8 130 aa9.06□□□□□ -0.96
DNMT3A-204ENST00000380756 IGLV5-39A0A0G2JS06 123 aa9.06□□□□□ -0.96
DNMT3A-204ENST00000380756 FAM110AQ9BQ89 295 aa9.06□□□□□ -0.96
DNMT3A-204ENST00000380756 MGAQ8IWI9 3026 aa9.05□□□□□ -0.96
DNMT3A-204ENST00000380756 PRR3P79522 188 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms