RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ZGRF1Q86YA3 2104 aa12.36□□□□□ -0.43
COL4A3BP-203ENST00000380494 IL17DQ8TAD2 202 aa12.36□□□□□ -0.43
COL4A3BP-203ENST00000380494 DSCAML1Q8TD84 2053 aa12.36□□□□□ -0.43
COL4A3BP-203ENST00000380494 TRBV7-6A0A0J9YX20 115 aa12.35□□□□□ -0.43
COL4A3BP-203ENST00000380494 CYSRT1A8MQ03 144 aa12.35□□□□□ -0.43
COL4A3BP-203ENST00000380494 BCE1O60756 84 aa12.35□□□□□ -0.43
COL4A3BP-203ENST00000380494 CXCL6P80162 114 aa12.35□□□□□ -0.43
COL4A3BP-203ENST00000380494 HILS1P60008 231 aa12.35□□□□□ -0.43
COL4A3BP-203ENST00000380494 TMEM254Q8TBM7 123 aa12.34□□□□□ -0.43
COL4A3BP-203ENST00000380494 EGFEM1PQ0D2K5 195 aa12.34□□□□□ -0.43
COL4A3BP-203ENST00000380494 C10orf99Q6UWK7 81 aa12.34□□□□□ -0.43
COL4A3BP-203ENST00000380494 LINC01561Q8N1V8 128 aa12.33□□□□□ -0.43
COL4A3BP-203ENST00000380494 BRI3O95415 125 aa12.33□□□□□ -0.44
COL4A3BP-203ENST00000380494 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
COL4A3BP-203ENST00000380494 LINC00846Q9NV44 126 aa12.33□□□□□ -0.44
COL4A3BP-203ENST00000380494 C1orf137Q5JT78 98 aa12.33□□□□□ -0.44
COL4A3BP-203ENST00000380494 LINC00208Q96KT6 92 aa12.32□□□□□ -0.44
COL4A3BP-203ENST00000380494 MED12LQ86YW9 2145 aa12.31□□□□□ -0.44
COL4A3BP-203ENST00000380494 Q6ZVQ6 151 aa12.31□□□□□ -0.44
COL4A3BP-203ENST00000380494 LRCOL1A6NCL2 159 aa12.31□□□□□ -0.44
COL4A3BP-203ENST00000380494 C10orf25Q5T742 122 aa12.3□□□□□ -0.44
COL4A3BP-203ENST00000380494 F8WDY8 70 aa12.3□□□□□ -0.44
COL4A3BP-203ENST00000380494 LINC01547P58512 204 aaPredicted RBP12.3□□□□□ -0.44
COL4A3BP-203ENST00000380494 PRO0461Q9UI25 63 aa12.3□□□□□ -0.44
COL4A3BP-203ENST00000380494 C19orf84I3L1E1 186 aa12.29□□□□□ -0.44
COL4A3BP-203ENST00000380494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.29□□□□□ -0.44
COL4A3BP-203ENST00000380494 ESRGQ1W209 222 aa12.29□□□□□ -0.44
COL4A3BP-203ENST00000380494 ZNF580Q9UK33 172 aa12.29□□□□□ -0.44
COL4A3BP-203ENST00000380494 RPL37AP8A6NKH3 93 aa12.28□□□□□ -0.44
COL4A3BP-203ENST00000380494 TRAV10A0A0B4J240 114 aa12.28□□□□□ -0.44
COL4A3BP-203ENST00000380494 SMCPP49901 116 aaPredicted RBP12.27□□□□□ -0.44
COL4A3BP-203ENST00000380494 LINC00575Q6W349 94 aa12.27□□□□□ -0.44
COL4A3BP-203ENST00000380494 CREBBPQ92793 2442 aa12.27□□□□□ -0.44
COL4A3BP-203ENST00000380494 BEAN1Q3B7T3 259 aa12.27□□□□□ -0.44
COL4A3BP-203ENST00000380494 KPRPQ5T749 579 aaPredicted RBP12.26□□□□□ -0.45
COL4A3BP-203ENST00000380494 HCFC1P51610 2035 aa12.26□□□□□ -0.45
COL4A3BP-203ENST00000380494 hDV103S1A0JD37 113 aa12.26□□□□□ -0.45
COL4A3BP-203ENST00000380494 UNQ6190/PRO20217Q6UXQ8 127 aa12.26□□□□□ -0.45
COL4A3BP-203ENST00000380494 FREM1Q5H8C1 2179 aa12.26□□□□□ -0.45
COL4A3BP-203ENST00000380494 PSPHP1O15172 72 aa12.26□□□□□ -0.45
COL4A3BP-203ENST00000380494 SBSPONQ8IVN8 264 aa12.26□□□□□ -0.45
COL4A3BP-203ENST00000380494 LINC00474Q9P2X8 69 aa12.26□□□□□ -0.45
COL4A3BP-203ENST00000380494 PRM2P04554 102 aa12.25□□□□□ -0.45
COL4A3BP-203ENST00000380494 LINC00482Q8N8I6 264 aa12.25□□□□□ -0.45
COL4A3BP-203ENST00000380494 C10orf142B7Z368 130 aa12.25□□□□□ -0.45
COL4A3BP-203ENST00000380494 EML5Q05BV3 1969 aa12.24□□□□□ -0.45
COL4A3BP-203ENST00000380494 PLAC8L1A1L4L8 177 aa12.23□□□□□ -0.45
COL4A3BP-203ENST00000380494 C4orf26Q17RF5 130 aa12.23□□□□□ -0.45
COL4A3BP-203ENST00000380494 ACACAQ13085 2346 aa12.22□□□□□ -0.45
COL4A3BP-203ENST00000380494 LIMD2Q9BT23 127 aa12.22□□□□□ -0.45
COL4A3BP-203ENST00000380494 IGLV4-60A0A075B6I1 120 aa12.22□□□□□ -0.45
COL4A3BP-203ENST00000380494 TANC2Q9HCD6 1990 aa12.22□□□□□ -0.45
COL4A3BP-203ENST00000380494 CNOT1A5YKK6 2376 aaKnown RBP12.22□□□□□ -0.45
COL4A3BP-203ENST00000380494 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
COL4A3BP-203ENST00000380494 EP300Q09472 2414 aaPredicted RBP12.21□□□□□ -0.45
COL4A3BP-203ENST00000380494 A0A1B0GUV1 79 aa12.21□□□□□ -0.46
COL4A3BP-203ENST00000380494 H0Y9P7 68 aa12.21□□□□□ -0.46
COL4A3BP-203ENST00000380494 C18orf65Q6ZTR6 163 aa12.21□□□□□ -0.46
COL4A3BP-203ENST00000380494 C7orf33Q8WU49 177 aa12.21□□□□□ -0.46
COL4A3BP-203ENST00000380494 IGLV5-39A0A0G2JS06 123 aa12.21□□□□□ -0.46
COL4A3BP-203ENST00000380494 HCG22E2RYF7 251 aa12.21□□□□□ -0.46
COL4A3BP-203ENST00000380494 C9orf116Q5BN46 136 aaPredicted RBP12.21□□□□□ -0.46
COL4A3BP-203ENST00000380494 PRR3P79522 188 aaKnown RBP12.2□□□□□ -0.46
COL4A3BP-203ENST00000380494 GVINP1Q7Z2Y8 2422 aa12.2□□□□□ -0.46
COL4A3BP-203ENST00000380494 COL6A6A6NMZ7 2263 aa12.2□□□□□ -0.46
COL4A3BP-203ENST00000380494 SPINK6Q6UWN8 80 aa12.2□□□□□ -0.46
COL4A3BP-203ENST00000380494 LINC00337Q8N6G1 96 aa12.19□□□□□ -0.46
COL4A3BP-203ENST00000380494 KIF25-AS1Q9Y6Z4 181 aa12.19□□□□□ -0.46
COL4A3BP-203ENST00000380494 SPTAN1Q13813 2472 aaKnown RBP12.18□□□□□ -0.46
COL4A3BP-203ENST00000380494 FHL2Q14192 279 aa12.18□□□□□ -0.46
COL4A3BP-203ENST00000380494 ODF3L2Q3SX64 289 aa12.18□□□□□ -0.46
COL4A3BP-203ENST00000380494 PCDH15Q96QU1 1955 aa12.18□□□□□ -0.46
COL4A3BP-203ENST00000380494 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.18□□□□□ -0.46
COL4A3BP-203ENST00000380494 NANOS2P60321 138 aaKnown RBP12.18□□□□□ -0.46
COL4A3BP-203ENST00000380494 NOTCH3Q9UM47 2321 aa12.18□□□□□ -0.46
COL4A3BP-203ENST00000380494 IGLV9-49A0A0B4J1Y8 123 aa12.17□□□□□ -0.46
COL4A3BP-203ENST00000380494 SPTBN2O15020 2390 aa12.16□□□□□ -0.46
COL4A3BP-203ENST00000380494 EDN2P20800 178 aa12.16□□□□□ -0.46
COL4A3BP-203ENST00000380494 C2orf48Q96LS8 159 aa12.16□□□□□ -0.46
COL4A3BP-203ENST00000380494 CACNA1BQ00975 2339 aa12.15□□□□□ -0.46
COL4A3BP-203ENST00000380494 CPAMD8Q8IZJ3 1885 aa12.15□□□□□ -0.46
COL4A3BP-203ENST00000380494 Q6ZSN1 163 aa12.15□□□□□ -0.46
COL4A3BP-203ENST00000380494 LINC01006Q8NI28 216 aa12.15□□□□□ -0.46
COL4A3BP-203ENST00000380494 COL5A1P20908 1838 aaPredicted RBP12.15□□□□□ -0.46
COL4A3BP-203ENST00000380494 CACNA1GO43497 2377 aa12.14□□□□□ -0.47
COL4A3BP-203ENST00000380494 IGHV4-30-4P0DP06 118 aa12.14□□□□□ -0.47
COL4A3BP-203ENST00000380494 CACNA1HO95180 2353 aa12.13□□□□□ -0.47
COL4A3BP-203ENST00000380494 PCNX2A6NKB5 2137 aa12.12□□□□□ -0.47
COL4A3BP-203ENST00000380494 A0A1B0GW54 56 aa12.12□□□□□ -0.47
COL4A3BP-203ENST00000380494 ABCA4P78363 2273 aa12.11□□□□□ -0.47
COL4A3BP-203ENST00000380494 TNCP24821 2201 aa12.11□□□□□ -0.47
COL4A3BP-203ENST00000380494 GPR179Q6PRD1 2367 aa12.1□□□□□ -0.47
COL4A3BP-203ENST00000380494 LRP4O75096 1905 aa12.1□□□□□ -0.47
COL4A3BP-203ENST00000380494 Q9BRP9 147 aa12.09□□□□□ -0.47
COL4A3BP-203ENST00000380494 IGLV5-45A0A087WSX0 123 aa12.09□□□□□ -0.47
COL4A3BP-203ENST00000380494 PCOTHQ58A44 107 aa12.09□□□□□ -0.47
COL4A3BP-203ENST00000380494 IGHV6-1A0A0B4J1U7 121 aa12.07□□□□□ -0.48
COL4A3BP-203ENST00000380494 SPATA3Q8NHX4 192 aa12.07□□□□□ -0.48
COL4A3BP-203ENST00000380494 FAM19A4Q96LR4 140 aa12.07□□□□□ -0.48
COL4A3BP-203ENST00000380494 PLXNB1O43157 2135 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms