RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 FAM110AQ9BQ89 295 aa11.57□□□□□ -0.56
VPS16-203ENST00000380469 SONP18583 2426 aaKnown RBP11.57□□□□□ -0.56
VPS16-203ENST00000380469 COX7A2LO14548 114 aa11.57□□□□□ -0.56
VPS16-203ENST00000380469 GAGE2BQ13066 116 aa11.57□□□□□ -0.56
VPS16-203ENST00000380469 GAGE2EQ4V326 116 aa11.57□□□□□ -0.56
VPS16-203ENST00000380469 WFDC10AQ9H1F0 79 aa11.57□□□□□ -0.56
VPS16-203ENST00000380469 C16orf95Q9H693 158 aa11.57□□□□□ -0.56
VPS16-203ENST00000380469 GAGE2DQ9UEU5 116 aa11.57□□□□□ -0.56
VPS16-203ENST00000380469 OVOL2Q9BRP0 275 aa11.56□□□□□ -0.56
VPS16-203ENST00000380469 LOC100131303A0A0U1RQF7 123 aa11.55□□□□□ -0.56
VPS16-203ENST00000380469 IGLV1-51P01701 117 aa11.55□□□□□ -0.56
VPS16-203ENST00000380469 NF1P21359 2839 aa11.55□□□□□ -0.56
VPS16-203ENST00000380469 SHISA2Q6UWI4 295 aa11.55□□□□□ -0.56
VPS16-203ENST00000380469 ANAPC13Q9BS18 74 aa11.55□□□□□ -0.56
VPS16-203ENST00000380469 DEFB121Q5J5C9 76 aa11.54□□□□□ -0.56
VPS16-203ENST00000380469 PPDPFQ9H3Y8 114 aa11.54□□□□□ -0.56
VPS16-203ENST00000380469 RNASE1P07998 156 aaKnown RBP11.54□□□□□ -0.56
VPS16-203ENST00000380469 GAGE6Q13070 117 aa11.54□□□□□ -0.56
VPS16-203ENST00000380469 C15orf53Q8NAA6 179 aa11.53□□□□□ -0.56
VPS16-203ENST00000380469 CSNK1G2-AS1Q8NCQ2 148 aa11.53□□□□□ -0.56
VPS16-203ENST00000380469 COX7B2Q8TF08 81 aa11.53□□□□□ -0.56
VPS16-203ENST00000380469 C19orf73Q9NVV2 129 aa11.53□□□□□ -0.56
VPS16-203ENST00000380469 CRLF1O75462 422 aa11.53□□□□□ -0.56
VPS16-203ENST00000380469 TRAV26-1A0A087WT03 109 aa11.52□□□□□ -0.57
VPS16-203ENST00000380469 FAM240AA0A1B0GVK7 77 aa11.52□□□□□ -0.57
VPS16-203ENST00000380469 NOTCH3Q9UM47 2321 aa11.51□□□□□ -0.57
VPS16-203ENST00000380469 IGKV3OR2-268A0A0C4DH90 116 aa11.51□□□□□ -0.57
VPS16-203ENST00000380469 TRBV6-8A0A0A6YYG3 113 aa11.51□□□□□ -0.57
VPS16-203ENST00000380469 FHL2Q14192 279 aa11.51□□□□□ -0.57
VPS16-203ENST00000380469 MRPL23Q16540 153 aaKnown RBP11.51□□□□□ -0.57
VPS16-203ENST00000380469 CHCHD5Q9BSY4 110 aa11.51□□□□□ -0.57
VPS16-203ENST00000380469 TOMM7Q9P0U1 55 aa11.51□□□□□ -0.57
VPS16-203ENST00000380469 TRAV13-2A0A0B4J235 113 aa11.5□□□□□ -0.57
VPS16-203ENST00000380469 PLA2G2AP14555 144 aa11.5□□□□□ -0.57
VPS16-203ENST00000380469 Q6Q795 121 aa11.5□□□□□ -0.57
VPS16-203ENST00000380469 SETXQ7Z333 2677 aaKnown RBP11.5□□□□□ -0.57
VPS16-203ENST00000380469 TRACP01848 142 aa11.49□□□□□ -0.57
VPS16-203ENST00000380469 PF4P02776 101 aa11.49□□□□□ -0.57
VPS16-203ENST00000380469 TTC32Q5I0X7 151 aa11.49□□□□□ -0.57
VPS16-203ENST00000380469 FLNAP21333 2647 aaKnown RBP11.49□□□□□ -0.57
VPS16-203ENST00000380469 HIST2H2BCQ6DN03 193 aa11.48□□□□□ -0.57
VPS16-203ENST00000380469 IGLV4-60A0A075B6I1 120 aa11.48□□□□□ -0.57
VPS16-203ENST00000380469 MIR7-3HGQ8N6C7 128 aa11.48□□□□□ -0.57
VPS16-203ENST00000380469 C2CD3Q4AC94 2353 aa11.48□□□□□ -0.57
VPS16-203ENST00000380469 CRPP02741 224 aa11.47□□□□□ -0.57
VPS16-203ENST00000380469 KRTAP1-1Q07627 177 aa11.47□□□□□ -0.57
VPS16-203ENST00000380469 NDUFV3P56181 108 aaKnown RBP11.47□□□□□ -0.57
VPS16-203ENST00000380469 LINC00158P58513 81 aa11.47□□□□□ -0.57
VPS16-203ENST00000380469 JMJD1CQ15652 2540 aa11.47□□□□□ -0.57
VPS16-203ENST00000380469 FAM222AQ5U5X8 452 aa11.47□□□□□ -0.57
VPS16-203ENST00000380469 CCDC168Q8NDH2 2452 aa11.47□□□□□ -0.57
VPS16-203ENST00000380469 NIPBLQ6KC79 2804 aaeCLIP11.46□□□□□ -0.57
VPS16-203ENST00000380469 SETD2Q9BYW2 2564 aaPredicted RBP11.46□□□□□ -0.58
VPS16-203ENST00000380469 IGHV3OR16-9A0A0B4J2B5 98 aa11.46□□□□□ -0.58
VPS16-203ENST00000380469 BAALC-AS2P0C853 105 aa11.46□□□□□ -0.58
VPS16-203ENST00000380469 SND1-IT1Q9HBX3 110 aa11.46□□□□□ -0.58
VPS16-203ENST00000380469 NBPF19A0A087WUL8 3843 aa11.45□□□□□ -0.58
VPS16-203ENST00000380469 ACYP1P07311 99 aa11.45□□□□□ -0.58
VPS16-203ENST00000380469 RPL28P46779 137 aaKnown RBP11.44□□□□□ -0.58
VPS16-203ENST00000380469 CUBNO60494 3623 aa11.44□□□□□ -0.58
VPS16-203ENST00000380469 A0A087WZ39 114 aa11.44□□□□□ -0.58
VPS16-203ENST00000380469 DEFB130BP0DP73 79 aa11.44□□□□□ -0.58
VPS16-203ENST00000380469 DEFB130AP0DP74 79 aa11.44□□□□□ -0.58
VPS16-203ENST00000380469 IBA57-AS1B1ANH7 110 aa11.43□□□□□ -0.58
VPS16-203ENST00000380469 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
VPS16-203ENST00000380469 C5orf38Q86SI9 138 aa11.42□□□□□ -0.58
VPS16-203ENST00000380469 KIR2DL5BQ8NHK3 375 aa11.42□□□□□ -0.58
VPS16-203ENST00000380469 FAM218AQ96MZ4 157 aa11.42□□□□□ -0.58
VPS16-203ENST00000380469 LINC00337Q8N6G1 96 aa11.42□□□□□ -0.58
VPS16-203ENST00000380469 IGKV2-28A0A075B6P5 120 aa11.41□□□□□ -0.58
VPS16-203ENST00000380469 IGKV2D-28P01615 120 aa11.41□□□□□ -0.58
VPS16-203ENST00000380469 HILS1P60008 231 aa11.41□□□□□ -0.58
VPS16-203ENST00000380469 LINC00959A0A1B0GUT2 108 aa11.41□□□□□ -0.58
VPS16-203ENST00000380469 GYPEP15421 78 aa11.4□□□□□ -0.58
VPS16-203ENST00000380469 CCL18P55774 89 aa11.4□□□□□ -0.58
VPS16-203ENST00000380469 PFN2P35080 140 aa11.4□□□□□ -0.59
VPS16-203ENST00000380469 C6orf226Q5I0X4 101 aa11.39□□□□□ -0.59
VPS16-203ENST00000380469 SS18Q15532 418 aa11.38□□□□□ -0.59
VPS16-203ENST00000380469 LINC00612Q8N6U2 182 aa11.38□□□□□ -0.59
VPS16-203ENST00000380469 SMIM11BQ8TCY0 68 aa11.38□□□□□ -0.59
VPS16-203ENST00000380469 Q9HAA7 133 aa11.38□□□□□ -0.59
VPS16-203ENST00000380469 MALP21145 153 aa11.37□□□□□ -0.59
VPS16-203ENST00000380469 TRBV7-7A0A0K0K1E9 115 aa11.37□□□□□ -0.59
VPS16-203ENST00000380469 H0YGX0 51 aa11.37□□□□□ -0.59
VPS16-203ENST00000380469 DNAL4O96015 105 aa11.37□□□□□ -0.59
VPS16-203ENST00000380469 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
VPS16-203ENST00000380469 A0A1B0GUV1 79 aa11.36□□□□□ -0.59
VPS16-203ENST00000380469 PAX4O43316 350 aa11.36□□□□□ -0.59
VPS16-203ENST00000380469 ACANP16112 2415 aa11.36□□□□□ -0.59
VPS16-203ENST00000380469 XCL1P47992 114 aa11.36□□□□□ -0.59
VPS16-203ENST00000380469 C22orf24Q9Y442 160 aa11.36□□□□□ -0.59
VPS16-203ENST00000380469 ANK3Q12955 4377 aaKnown RBP11.35□□□□□ -0.59
VPS16-203ENST00000380469 C11orf68Q9H3H3 251 aaKnown RBP11.35□□□□□ -0.59
VPS16-203ENST00000380469 PRO0255Q9UI72 69 aa11.35□□□□□ -0.59
VPS16-203ENST00000380469 PDZD2O15018 2839 aa11.35□□□□□ -0.59
VPS16-203ENST00000380469 SMIM9A6NGZ8 99 aa11.35□□□□□ -0.59
VPS16-203ENST00000380469 OR13C6PQ8NH95 151 aa11.34□□□□□ -0.59
VPS16-203ENST00000380469 MTORP42345 2549 aa11.34□□□□□ -0.59
VPS16-203ENST00000380469 LINC00643Q86TS7 51 aa11.34□□□□□ -0.59
VPS16-203ENST00000380469 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms