RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 C11orf68Q9H3H3 251 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-205ENST00000380180 IGLV5-39A0A0G2JS06 123 aa13.72□□□□□ -0.21
PDLIM5-205ENST00000380180 C9orf118A6NHY6 69 aa13.72□□□□□ -0.21
PDLIM5-205ENST00000380180 SMIM1B2RUZ4 78 aa13.72□□□□□ -0.21
PDLIM5-205ENST00000380180 ZFAND6Q6FIF0 208 aa13.72□□□□□ -0.21
PDLIM5-205ENST00000380180 ICOSQ9Y6W8 199 aa13.72□□□□□ -0.21
PDLIM5-205ENST00000380180 IGHV3-30P01768 117 aa13.71□□□□□ -0.22
PDLIM5-205ENST00000380180 IGHV3-30-5P0DP03 117 aa13.71□□□□□ -0.22
PDLIM5-205ENST00000380180 VAMP3Q15836 100 aa13.71□□□□□ -0.22
PDLIM5-205ENST00000380180 MDFIQ99750 246 aa13.71□□□□□ -0.22
PDLIM5-205ENST00000380180 A0A0J9YWU9 116 aa13.7□□□□□ -0.22
PDLIM5-205ENST00000380180 NAA38Q9BRA0 125 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-205ENST00000380180 H3BUT2 72 aa13.69□□□□□ -0.22
PDLIM5-205ENST00000380180 Q6ZTC4 211 aa13.69□□□□□ -0.22
PDLIM5-205ENST00000380180 SH2D6Q7Z4S9 175 aa13.69□□□□□ -0.22
PDLIM5-205ENST00000380180 K7EIL1 84 aa13.68□□□□□ -0.22
PDLIM5-205ENST00000380180 LINC00959A0A1B0GUT2 108 aa13.68□□□□□ -0.22
PDLIM5-205ENST00000380180 A0A1B0GWB2 263 aa13.67□□□□□ -0.22
PDLIM5-205ENST00000380180 TMEM238C9JI98 176 aa13.67□□□□□ -0.22
PDLIM5-205ENST00000380180 TMEM238LA0A1B0GVL6 79 aa13.66□□□□□ -0.22
PDLIM5-205ENST00000380180 A6NJY4 79 aa13.66□□□□□ -0.22
PDLIM5-205ENST00000380180 NDUFA1O15239 70 aa13.66□□□□□ -0.22
PDLIM5-205ENST00000380180 UBE2V1Q13404 147 aa13.66□□□□□ -0.22
PDLIM5-205ENST00000380180 LITAFQ99732 161 aa13.66□□□□□ -0.22
PDLIM5-205ENST00000380180 IGHV3OR16-9A0A0B4J2B5 98 aa13.66□□□□□ -0.22
PDLIM5-205ENST00000380180 DEFB121Q5J5C9 76 aa13.66□□□□□ -0.22
PDLIM5-205ENST00000380180 LELP1Q5T871 98 aa13.65□□□□□ -0.22
PDLIM5-205ENST00000380180 Q8N3U1 123 aa13.65□□□□□ -0.22
PDLIM5-205ENST00000380180 MGAM2Q2M2H8 2515 aa13.65□□□□□ -0.22
PDLIM5-205ENST00000380180 ADAMTSL4-AS1Q5T5F5 129 aa13.64□□□□□ -0.23
PDLIM5-205ENST00000380180 CLPSL2Q6UWE3 100 aa13.64□□□□□ -0.23
PDLIM5-205ENST00000380180 H3BNG1 76 aa13.64□□□□□ -0.23
PDLIM5-205ENST00000380180 CCL25O15444 150 aa13.64□□□□□ -0.23
PDLIM5-205ENST00000380180 NANOS2P60321 138 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-205ENST00000380180 Q9H8V8 135 aa13.64□□□□□ -0.23
PDLIM5-205ENST00000380180 KPRPQ5T749 579 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-205ENST00000380180 LYPD5Q6UWN5 251 aa13.63□□□□□ -0.23
PDLIM5-205ENST00000380180 MUSTN1Q8IVN3 82 aa13.63□□□□□ -0.23
PDLIM5-205ENST00000380180 LINC00269Q8N2A0 174 aa13.63□□□□□ -0.23
PDLIM5-205ENST00000380180 C11orf45Q8TAV5 145 aa13.63□□□□□ -0.23
PDLIM5-205ENST00000380180 SS18Q15532 418 aa13.63□□□□□ -0.23
PDLIM5-205ENST00000380180 MRAPQ8TCY5 172 aa13.63□□□□□ -0.23
PDLIM5-205ENST00000380180 A0A1W2PPM0 123 aa13.62□□□□□ -0.23
PDLIM5-205ENST00000380180 SPATA25Q9BR10 227 aa13.62□□□□□ -0.23
PDLIM5-205ENST00000380180 A0A087WZ39 114 aa13.61□□□□□ -0.23
PDLIM5-205ENST00000380180 IGLL5B9A064 214 aa13.61□□□□□ -0.23
PDLIM5-205ENST00000380180 APOMO95445 188 aa13.61□□□□□ -0.23
PDLIM5-205ENST00000380180 ANGP03950 147 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-205ENST00000380180 C5orf38Q86SI9 138 aa13.61□□□□□ -0.23
PDLIM5-205ENST00000380180 TM2D3Q9BRN9 247 aa13.61□□□□□ -0.23
PDLIM5-205ENST00000380180 XCL1P47992 114 aa13.61□□□□□ -0.23
PDLIM5-205ENST00000380180 ZNF625Q96I27 306 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-205ENST00000380180 PRSS2P07478 247 aa13.6□□□□□ -0.23
PDLIM5-205ENST00000380180 SPANXDQ9BXN6 97 aa13.6□□□□□ -0.23
PDLIM5-205ENST00000380180 SPANXCQ9NY87 97 aa13.6□□□□□ -0.23
PDLIM5-205ENST00000380180 A4D1N5 150 aa13.59□□□□□ -0.23
PDLIM5-205ENST00000380180 TIMM17BO60830 172 aa13.59□□□□□ -0.23
PDLIM5-205ENST00000380180 CFC1BP0CG36 223 aa13.59□□□□□ -0.23
PDLIM5-205ENST00000380180 CFC1P0CG37 223 aa13.59□□□□□ -0.23
PDLIM5-205ENST00000380180 RPL24P83731 157 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-205ENST00000380180 COX7B2Q8TF08 81 aa13.59□□□□□ -0.23
PDLIM5-205ENST00000380180 DEFB131BA0A096LNP1 70 aa13.58□□□□□ -0.24
PDLIM5-205ENST00000380180 REG3AQ06141 175 aa13.58□□□□□ -0.24
PDLIM5-205ENST00000380180 GAGE10A6NGK3 116 aa13.57□□□□□ -0.24
PDLIM5-205ENST00000380180 MIAQ16674 131 aa13.57□□□□□ -0.24
PDLIM5-205ENST00000380180 TOMM7Q9P0U1 55 aa13.57□□□□□ -0.24
PDLIM5-205ENST00000380180 FABP2P12104 132 aa13.57□□□□□ -0.24
PDLIM5-205ENST00000380180 CIRBPQ14011 172 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-205ENST00000380180 DAND5Q8N907 189 aa13.56□□□□□ -0.24
PDLIM5-205ENST00000380180 PGPEP1Q9NXJ5 209 aa13.56□□□□□ -0.24
PDLIM5-205ENST00000380180 NPC2P61916 151 aa13.55□□□□□ -0.24
PDLIM5-205ENST00000380180 HERV-K104P63124 156 aa13.55□□□□□ -0.24
PDLIM5-205ENST00000380180 GTF2H5Q6ZYL4 71 aa13.54□□□□□ -0.24
PDLIM5-205ENST00000380180 SPCS1Q9Y6A9 102 aa13.54□□□□□ -0.24
PDLIM5-205ENST00000380180 IGLV10-54A0A075B6I4 117 aa13.54□□□□□ -0.24
PDLIM5-205ENST00000380180 A0A0U1RRA0 63 aa13.54□□□□□ -0.24
PDLIM5-205ENST00000380180 K7EP34 96 aa13.54□□□□□ -0.24
PDLIM5-205ENST00000380180 EIF4EBP3O60516 100 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-205ENST00000380180 CHCHD10Q8WYQ3 142 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-205ENST00000380180 MEIG1Q5JSS6 88 aa13.53□□□□□ -0.24
PDLIM5-205ENST00000380180 CD164L2Q6UWJ8 174 aa13.53□□□□□ -0.24
PDLIM5-205ENST00000380180 KLK12Q9UKR0 248 aa13.52□□□□□ -0.24
PDLIM5-205ENST00000380180 TSPAN13O95857 204 aa13.52□□□□□ -0.25
PDLIM5-205ENST00000380180 PRO1854Q9UHT4 67 aa13.52□□□□□ -0.25
PDLIM5-205ENST00000380180 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-205ENST00000380180 IFITM1P13164 125 aa13.51□□□□□ -0.25
PDLIM5-205ENST00000380180 ESRGQ1W209 222 aa13.51□□□□□ -0.25
PDLIM5-205ENST00000380180 A0A0B4J2C4 111 aa13.5□□□□□ -0.25
PDLIM5-205ENST00000380180 IGHV3-33P01772 117 aa13.5□□□□□ -0.25
PDLIM5-205ENST00000380180 WFDC10BQ8IUB3 73 aa13.5□□□□□ -0.25
PDLIM5-205ENST00000380180 LINC01561Q8N1V8 128 aa13.5□□□□□ -0.25
PDLIM5-205ENST00000380180 PRR34Q9NV39 138 aa13.5□□□□□ -0.25
PDLIM5-205ENST00000380180 C6orf226Q5I0X4 101 aa13.49□□□□□ -0.25
PDLIM5-205ENST00000380180 COX7A2LO14548 114 aa13.48□□□□□ -0.25
PDLIM5-205ENST00000380180 ENHOQ6UWT2 76 aa13.48□□□□□ -0.25
PDLIM5-205ENST00000380180 LINC00308Q8TCZ7 52 aa13.48□□□□□ -0.25
PDLIM5-205ENST00000380180 TRAV10A0A0B4J240 114 aa13.47□□□□□ -0.25
PDLIM5-205ENST00000380180 FOXI1Q12951 378 aa13.47□□□□□ -0.25
PDLIM5-205ENST00000380180 SFTA2Q6UW10 78 aa13.46□□□□□ -0.25
PDLIM5-205ENST00000380180 Q8IZM0 81 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms