RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 A0A1W2PPM0 123 aa10.46□□□□□ -0.74
SNX2-201ENST00000379516 TMEM238C9JI98 176 aa10.46□□□□□ -0.74
SNX2-201ENST00000379516 ZFAND6Q6FIF0 208 aa10.46□□□□□ -0.74
SNX2-201ENST00000379516 ANK2Q01484 3957 aa10.46□□□□□ -0.74
SNX2-201ENST00000379516 IGLV5-39A0A0G2JS06 123 aa10.45□□□□□ -0.74
SNX2-201ENST00000379516 SMIM1B2RUZ4 78 aa10.45□□□□□ -0.74
SNX2-201ENST00000379516 TEX48A0A1B0GUV7 120 aa10.45□□□□□ -0.74
SNX2-201ENST00000379516 GAGE10A6NGK3 116 aa10.45□□□□□ -0.74
SNX2-201ENST00000379516 IGLL5B9A064 214 aa10.43□□□□□ -0.74
SNX2-201ENST00000379516 RBX1P62877 108 aa10.43□□□□□ -0.74
SNX2-201ENST00000379516 COL6A5A8TX70 2615 aa10.43□□□□□ -0.74
SNX2-201ENST00000379516 APOMO95445 188 aa10.43□□□□□ -0.74
SNX2-201ENST00000379516 FABP2P12104 132 aa10.43□□□□□ -0.74
SNX2-201ENST00000379516 MRPL23Q16540 153 aaKnown RBP10.43□□□□□ -0.74
SNX2-201ENST00000379516 A0A1B0GUV1 79 aa10.42□□□□□ -0.74
SNX2-201ENST00000379516 MUSTN1Q8IVN3 82 aa10.42□□□□□ -0.74
SNX2-201ENST00000379516 LITAFQ99732 161 aa10.42□□□□□ -0.74
SNX2-201ENST00000379516 NDUFA1O15239 70 aa10.42□□□□□ -0.74
SNX2-201ENST00000379516 GTF2H5Q6ZYL4 71 aa10.42□□□□□ -0.74
SNX2-201ENST00000379516 ICOSQ9Y6W8 199 aa10.42□□□□□ -0.74
SNX2-201ENST00000379516 DNAH3Q8TD57 4116 aa10.41□□□□□ -0.74
SNX2-201ENST00000379516 Q9H8V8 135 aa10.41□□□□□ -0.74
SNX2-201ENST00000379516 SPCS1Q9Y6A9 102 aa10.41□□□□□ -0.74
SNX2-201ENST00000379516 LINC00959A0A1B0GUT2 108 aa10.4□□□□□ -0.74
SNX2-201ENST00000379516 K7EP34 96 aa10.4□□□□□ -0.74
SNX2-201ENST00000379516 ADAMTSL4-AS1Q5T5F5 129 aa10.4□□□□□ -0.74
SNX2-201ENST00000379516 PRSS2P07478 247 aa10.4□□□□□ -0.74
SNX2-201ENST00000379516 CFC1BP0CG36 223 aa10.4□□□□□ -0.74
SNX2-201ENST00000379516 CFC1P0CG37 223 aa10.4□□□□□ -0.74
SNX2-201ENST00000379516 RPL24P83731 157 aaKnown RBP10.4□□□□□ -0.74
SNX2-201ENST00000379516 A4D1N5 150 aa10.39□□□□□ -0.75
SNX2-201ENST00000379516 PGPEP1Q9NXJ5 209 aa10.39□□□□□ -0.75
SNX2-201ENST00000379516 IGHV3OR16-9A0A0B4J2B5 98 aa10.39□□□□□ -0.75
SNX2-201ENST00000379516 CLPSL2Q6UWE3 100 aa10.39□□□□□ -0.75
SNX2-201ENST00000379516 SPANXDQ9BXN6 97 aa10.39□□□□□ -0.75
SNX2-201ENST00000379516 SPANXCQ9NY87 97 aa10.39□□□□□ -0.75
SNX2-201ENST00000379516 PRB2P02812 416 aaPredicted RBP10.38□□□□□ -0.75
SNX2-201ENST00000379516 SH2D6Q7Z4S9 175 aa10.38□□□□□ -0.75
SNX2-201ENST00000379516 ZNF625Q96I27 306 aaPredicted RBP10.38□□□□□ -0.75
SNX2-201ENST00000379516 C11orf68Q9H3H3 251 aaKnown RBP10.38□□□□□ -0.75
SNX2-201ENST00000379516 TIMM17BO60830 172 aa10.37□□□□□ -0.75
SNX2-201ENST00000379516 SS18Q15532 418 aa10.37□□□□□ -0.75
SNX2-201ENST00000379516 MIAQ16674 131 aa10.37□□□□□ -0.75
SNX2-201ENST00000379516 CIRBPQ14011 172 aaKnown RBP10.37□□□□□ -0.75
SNX2-201ENST00000379516 Q6ZTC4 211 aa10.37□□□□□ -0.75
SNX2-201ENST00000379516 C5orf38Q86SI9 138 aa10.37□□□□□ -0.75
SNX2-201ENST00000379516 A0A0J9YWU9 116 aa10.36□□□□□ -0.75
SNX2-201ENST00000379516 XCL1P47992 114 aa10.36□□□□□ -0.75
SNX2-201ENST00000379516 NPC2P61916 151 aa10.36□□□□□ -0.75
SNX2-201ENST00000379516 LELP1Q5T871 98 aa10.36□□□□□ -0.75
SNX2-201ENST00000379516 LINC00269Q8N2A0 174 aa10.36□□□□□ -0.75
SNX2-201ENST00000379516 Q8N3U1 123 aa10.36□□□□□ -0.75
SNX2-201ENST00000379516 TOMM7Q9P0U1 55 aa10.36□□□□□ -0.75
SNX2-201ENST00000379516 A0A087WZ39 114 aa10.36□□□□□ -0.75
SNX2-201ENST00000379516 TSPAN13O95857 204 aa10.36□□□□□ -0.75
SNX2-201ENST00000379516 COX7B2Q8TF08 81 aa10.36□□□□□ -0.75
SNX2-201ENST00000379516 ANGP03950 147 aaKnown RBP10.35□□□□□ -0.75
SNX2-201ENST00000379516 DAND5Q8N907 189 aa10.35□□□□□ -0.75
SNX2-201ENST00000379516 PRO1854Q9UHT4 67 aa10.35□□□□□ -0.75
SNX2-201ENST00000379516 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.34□□□□□ -0.75
SNX2-201ENST00000379516 A0A0U1RRA0 63 aa10.34□□□□□ -0.75
SNX2-201ENST00000379516 MEIG1Q5JSS6 88 aa10.34□□□□□ -0.75
SNX2-201ENST00000379516 EIF4EBP3O60516 100 aaPredicted RBP10.33□□□□□ -0.76
SNX2-201ENST00000379516 HERV-K104P63124 156 aa10.33□□□□□ -0.76
SNX2-201ENST00000379516 KPRPQ5T749 579 aaPredicted RBP10.33□□□□□ -0.76
SNX2-201ENST00000379516 LYPD5Q6UWN5 251 aa10.33□□□□□ -0.76
SNX2-201ENST00000379516 A0A0B4J2C4 111 aa10.33□□□□□ -0.76
SNX2-201ENST00000379516 SFTA2Q6UW10 78 aa10.33□□□□□ -0.76
SNX2-201ENST00000379516 IFITM1P13164 125 aa10.32□□□□□ -0.76
SNX2-201ENST00000379516 NANOS2P60321 138 aaKnown RBP10.32□□□□□ -0.76
SNX2-201ENST00000379516 REG3AQ06141 175 aa10.32□□□□□ -0.76
SNX2-201ENST00000379516 NOTCH1P46531 2555 aa10.31□□□□□ -0.76
SNX2-201ENST00000379516 H3BNG1 76 aa10.31□□□□□ -0.76
SNX2-201ENST00000379516 DEFB121Q5J5C9 76 aa10.31□□□□□ -0.76
SNX2-201ENST00000379516 C11orf45Q8TAV5 145 aa10.31□□□□□ -0.76
SNX2-201ENST00000379516 LOC107984156A0A0G2JMH3 177 aa10.31□□□□□ -0.76
SNX2-201ENST00000379516 ARL17AQ8IVW1 177 aa10.31□□□□□ -0.76
SNX2-201ENST00000379516 IGLV10-54A0A075B6I4 117 aa10.3□□□□□ -0.76
SNX2-201ENST00000379516 K7EIL1 84 aa10.3□□□□□ -0.76
SNX2-201ENST00000379516 H7C2G1 150 aa10.3□□□□□ -0.76
SNX2-201ENST00000379516 MRAPQ8TCY5 172 aa10.3□□□□□ -0.76
SNX2-201ENST00000379516 SPATA25Q9BR10 227 aa10.3□□□□□ -0.76
SNX2-201ENST00000379516 IGHV3-33P01772 117 aa10.29□□□□□ -0.76
SNX2-201ENST00000379516 LINC00308Q8TCZ7 52 aa10.29□□□□□ -0.76
SNX2-201ENST00000379516 CHCHD10Q8WYQ3 142 aaPredicted RBP10.29□□□□□ -0.76
SNX2-201ENST00000379516 ERG28Q9UKR5 140 aa10.29□□□□□ -0.76
SNX2-201ENST00000379516 DEFB131BA0A096LNP1 70 aa10.28□□□□□ -0.76
SNX2-201ENST00000379516 H3BMG7 143 aa10.28□□□□□ -0.76
SNX2-201ENST00000379516 CD164L2Q6UWJ8 174 aa10.28□□□□□ -0.76
SNX2-201ENST00000379516 TENM3Q9P273 2699 aa10.28□□□□□ -0.76
SNX2-201ENST00000379516 C6orf226Q5I0X4 101 aa10.28□□□□□ -0.76
SNX2-201ENST00000379516 MDFIQ99750 246 aa10.28□□□□□ -0.76
SNX2-201ENST00000379516 KLK12Q9UKR0 248 aa10.27□□□□□ -0.77
SNX2-201ENST00000379516 Q1RN00 199 aa10.27□□□□□ -0.77
SNX2-201ENST00000379516 LINC01561Q8N1V8 128 aa10.27□□□□□ -0.77
SNX2-201ENST00000379516 COPS9Q8WXC6 57 aa10.27□□□□□ -0.77
SNX2-201ENST00000379516 NBEAL1Q6ZS30 2694 aa10.26□□□□□ -0.77
SNX2-201ENST00000379516 COX7A2LO14548 114 aa10.26□□□□□ -0.77
SNX2-201ENST00000379516 SCGB1C2P0DMR2 95 aa10.26□□□□□ -0.77
SNX2-201ENST00000379516 LYRM7Q5U5X0 104 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms