RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 DEFB130BP0DP73 79 aa7.37□□□□□ -1.23
POLR2J3-201ENST00000379340 DEFB130AP0DP74 79 aa7.37□□□□□ -1.23
POLR2J3-201ENST00000379340 PRO0255Q9UI72 69 aa7.37□□□□□ -1.23
POLR2J3-201ENST00000379340 APOMO95445 188 aa7.36□□□□□ -1.23
POLR2J3-201ENST00000379340 TSPAN13O95857 204 aa7.36□□□□□ -1.23
POLR2J3-201ENST00000379340 CFC1BP0CG36 223 aa7.36□□□□□ -1.23
POLR2J3-201ENST00000379340 CFC1P0CG37 223 aa7.36□□□□□ -1.23
POLR2J3-201ENST00000379340 IFITM1P13164 125 aa7.36□□□□□ -1.23
POLR2J3-201ENST00000379340 MIFP14174 115 aa7.36□□□□□ -1.23
POLR2J3-201ENST00000379340 RNF183Q96D59 192 aa7.36□□□□□ -1.23
POLR2J3-201ENST00000379340 LITAFQ99732 161 aa7.36□□□□□ -1.23
POLR2J3-201ENST00000379340 PRO1854Q9UHT4 67 aa7.36□□□□□ -1.23
POLR2J3-201ENST00000379340 A4D1N5 150 aa7.35□□□□□ -1.23
POLR2J3-201ENST00000379340 F8W1H4 67 aa7.35□□□□□ -1.23
POLR2J3-201ENST00000379340 K7ERU9 68 aa7.35□□□□□ -1.23
POLR2J3-201ENST00000379340 PRB2P02812 416 aaPredicted RBP7.35□□□□□ -1.23
POLR2J3-201ENST00000379340 COX6A2Q02221 97 aa7.35□□□□□ -1.23
POLR2J3-201ENST00000379340 MIAQ16674 131 aa7.35□□□□□ -1.23
POLR2J3-201ENST00000379340 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
POLR2J3-201ENST00000379340 MUSTN1Q8IVN3 82 aa7.35□□□□□ -1.23
POLR2J3-201ENST00000379340 ATP6V0E2Q8NHE4 81 aa7.35□□□□□ -1.23
POLR2J3-201ENST00000379340 TRAV13-1A0A0B4J241 112 aa7.34□□□□□ -1.23
POLR2J3-201ENST00000379340 SMIM1B2RUZ4 78 aa7.34□□□□□ -1.23
POLR2J3-201ENST00000379340 GYPEP15421 78 aa7.34□□□□□ -1.23
POLR2J3-201ENST00000379340 CIRBPQ14011 172 aaKnown RBP7.34□□□□□ -1.23
POLR2J3-201ENST00000379340 DEFB135Q30KP9 77 aa7.34□□□□□ -1.23
POLR2J3-201ENST00000379340 OCIAD2Q56VL3 154 aa7.34□□□□□ -1.23
POLR2J3-201ENST00000379340 COPS9Q8WXC6 57 aa7.34□□□□□ -1.23
POLR2J3-201ENST00000379340 CHCHD5Q9BSY4 110 aa7.34□□□□□ -1.23
POLR2J3-201ENST00000379340 HERV-K104P63124 156 aa7.33□□□□□ -1.24
POLR2J3-201ENST00000379340 GAGE6Q13070 117 aa7.33□□□□□ -1.24
POLR2J3-201ENST00000379340 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
POLR2J3-201ENST00000379340 IGHV4-28A0A0C4DH34 117 aa7.33□□□□□ -1.24
POLR2J3-201ENST00000379340 TEX48A0A1B0GUV7 120 aa7.33□□□□□ -1.24
POLR2J3-201ENST00000379340 F5H768 121 aa7.33□□□□□ -1.24
POLR2J3-201ENST00000379340 PPDPFQ9H3Y8 114 aa7.33□□□□□ -1.24
POLR2J3-201ENST00000379340 A0A1B0GUV1 79 aa7.32□□□□□ -1.24
POLR2J3-201ENST00000379340 PAX4O43316 350 aa7.32□□□□□ -1.24
POLR2J3-201ENST00000379340 DAD1P61803 113 aa7.32□□□□□ -1.24
POLR2J3-201ENST00000379340 Q8NAQ8 132 aa7.32□□□□□ -1.24
POLR2J3-201ENST00000379340 ERG28Q9UKR5 140 aa7.32□□□□□ -1.24
POLR2J3-201ENST00000379340 TENM3Q9P273 2699 aa7.32□□□□□ -1.24
POLR2J3-201ENST00000379340 TRAV26-1A0A087WT03 109 aa7.31□□□□□ -1.24
POLR2J3-201ENST00000379340 LOC107984156A0A0G2JMH3 177 aa7.31□□□□□ -1.24
POLR2J3-201ENST00000379340 A8MZ25 164 aa7.31□□□□□ -1.24
POLR2J3-201ENST00000379340 IGHV3-33P01772 117 aa7.31□□□□□ -1.24
POLR2J3-201ENST00000379340 ATP5G1P05496 136 aa7.31□□□□□ -1.24
POLR2J3-201ENST00000379340 ARL17AQ8IVW1 177 aa7.31□□□□□ -1.24
POLR2J3-201ENST00000379340 Q9H8V8 135 aa7.31□□□□□ -1.24
POLR2J3-201ENST00000379340 PRSS2P07478 247 aa7.3□□□□□ -1.24
POLR2J3-201ENST00000379340 SPART-AS1P0CW21 52 aa7.3□□□□□ -1.24
POLR2J3-201ENST00000379340 IGHV4-30-4P0DP06 118 aa7.3□□□□□ -1.24
POLR2J3-201ENST00000379340 ADAMTSL4-AS1Q5T5F5 129 aa7.3□□□□□ -1.24
POLR2J3-201ENST00000379340 SFTA2Q6UW10 78 aa7.3□□□□□ -1.24
POLR2J3-201ENST00000379340 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
POLR2J3-201ENST00000379340 CBY1Q9Y3M2 126 aa7.3□□□□□ -1.24
POLR2J3-201ENST00000379340 IGLV4-60A0A075B6I1 120 aa7.29□□□□□ -1.24
POLR2J3-201ENST00000379340 G3V4G9 280 aa7.29□□□□□ -1.24
POLR2J3-201ENST00000379340 H3BMG7 143 aa7.29□□□□□ -1.24
POLR2J3-201ENST00000379340 SH2D6Q7Z4S9 175 aa7.29□□□□□ -1.24
POLR2J3-201ENST00000379340 NOTCH3Q9UM47 2321 aa7.29□□□□□ -1.24
POLR2J3-201ENST00000379340 RBX1P62877 108 aa7.29□□□□□ -1.24
POLR2J3-201ENST00000379340 LINC01561Q8N1V8 128 aa7.29□□□□□ -1.24
POLR2J3-201ENST00000379340 COX7B2Q8TF08 81 aa7.29□□□□□ -1.24
POLR2J3-201ENST00000379340 A0A087WZ39 114 aa7.28□□□□□ -1.24
POLR2J3-201ENST00000379340 TRBV30A0A0K0K1B3 111 aa7.28□□□□□ -1.24
POLR2J3-201ENST00000379340 EIF4EBP3O60516 100 aaPredicted RBP7.28□□□□□ -1.24
POLR2J3-201ENST00000379340 SCGB1C2P0DMR2 95 aa7.28□□□□□ -1.24
POLR2J3-201ENST00000379340 PSMB2P49721 201 aa7.28□□□□□ -1.24
POLR2J3-201ENST00000379340 SS18Q15532 418 aa7.28□□□□□ -1.24
POLR2J3-201ENST00000379340 MEIG1Q5JSS6 88 aa7.28□□□□□ -1.24
POLR2J3-201ENST00000379340 PRO0461Q9UI25 63 aa7.28□□□□□ -1.24
POLR2J3-201ENST00000379340 IGHV3OR16-9A0A0B4J2B5 98 aa7.27□□□□□ -1.25
POLR2J3-201ENST00000379340 LINC00959A0A1B0GUT2 108 aa7.27□□□□□ -1.25
POLR2J3-201ENST00000379340 Q1RN00 199 aa7.27□□□□□ -1.25
POLR2J3-201ENST00000379340 TMEM262E9PQX1 116 aa7.26□□□□□ -1.25
POLR2J3-201ENST00000379340 J3QR89 54 aa7.26□□□□□ -1.25
POLR2J3-201ENST00000379340 TCL1BO95988 128 aa7.26□□□□□ -1.25
POLR2J3-201ENST00000379340 EGFEM1PQ0D2K5 195 aa7.26□□□□□ -1.25
POLR2J3-201ENST00000379340 MRPL23Q16540 153 aaKnown RBP7.26□□□□□ -1.25
POLR2J3-201ENST00000379340 LINC00308Q8TCZ7 52 aa7.26□□□□□ -1.25
POLR2J3-201ENST00000379340 CELA1Q9UNI1 258 aa7.26□□□□□ -1.25
POLR2J3-201ENST00000379340 DEFB4AO15263 64 aa7.25□□□□□ -1.25
POLR2J3-201ENST00000379340 KPRPQ5T749 579 aaPredicted RBP7.25□□□□□ -1.25
POLR2J3-201ENST00000379340 ICOSQ9Y6W8 199 aa7.25□□□□□ -1.25
POLR2J3-201ENST00000379340 IGKV3OR2-268A0A0C4DH90 116 aa7.25□□□□□ -1.25
POLR2J3-201ENST00000379340 M0QXV9 152 aa7.25□□□□□ -1.25
POLR2J3-201ENST00000379340 COX6CP09669 75 aa7.25□□□□□ -1.25
POLR2J3-201ENST00000379340 WFDC2Q14508 124 aa7.25□□□□□ -1.25
POLR2J3-201ENST00000379340 RNF151Q2KHN1 245 aa7.25□□□□□ -1.25
POLR2J3-201ENST00000379340 COL7A1Q02388 2944 aa7.24□□□□□ -1.25
POLR2J3-201ENST00000379340 ATXN8Q156A1 80 aa7.24□□□□□ -1.25
POLR2J3-201ENST00000379340 VPS25Q9BRG1 176 aa7.24□□□□□ -1.25
POLR2J3-201ENST00000379340 H7C2G1 150 aa7.23□□□□□ -1.25
POLR2J3-201ENST00000379340 NPC2P61916 151 aa7.23□□□□□ -1.25
POLR2J3-201ENST00000379340 LELP1Q5T871 98 aa7.23□□□□□ -1.25
POLR2J3-201ENST00000379340 MRAPQ8TCY5 172 aa7.23□□□□□ -1.25
POLR2J3-201ENST00000379340 A0A096LPF7 62 aa7.22□□□□□ -1.25
POLR2J3-201ENST00000379340 IBA57-AS1B1ANH7 110 aa7.22□□□□□ -1.25
POLR2J3-201ENST00000379340 H3BNG1 76 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms