RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 MAP6D1Q9H9H5 199 aa5.83□□□□□ -1.48
PTPRR-203ENST00000378778 TRAV13-1A0A0B4J241 112 aa5.83□□□□□ -1.48
PTPRR-203ENST00000378778 C3orf56Q8N813 242 aa5.83□□□□□ -1.48
PTPRR-203ENST00000378778 MDFIQ99750 246 aa5.83□□□□□ -1.48
PTPRR-203ENST00000378778 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
PTPRR-203ENST00000378778 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
PTPRR-203ENST00000378778 LINC00846Q9NV44 126 aa5.83□□□□□ -1.48
PTPRR-203ENST00000378778 MYO18BQ8IUG5 2567 aa5.82□□□□□ -1.48
PTPRR-203ENST00000378778 TRBV6-4A0A1B0GX49 114 aa5.82□□□□□ -1.48
PTPRR-203ENST00000378778 HTN1P15515 57 aa5.82□□□□□ -1.48
PTPRR-203ENST00000378778 CCL19Q99731 98 aa5.82□□□□□ -1.48
PTPRR-203ENST00000378778 IGSF10Q6WRI0 2623 aa5.82□□□□□ -1.48
PTPRR-203ENST00000378778 TMEM256-PLSCR3K7ERE1 68 aa5.82□□□□□ -1.48
PTPRR-203ENST00000378778 Q9HAA7 133 aa5.82□□□□□ -1.48
PTPRR-203ENST00000378778 MED13LQ71F56 2210 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 A0A087WYN8 130 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 A0A087WZ39 114 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 LOC107984640A0A0U1RRK4 108 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 CCL18P55774 89 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 NTM-AS1Q6ZSK4 140 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 MUC7Q8TAX7 377 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 C14orf132Q9NPU4 83 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 Q9UF83 564 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 LINC00158P58513 81 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 C4orf3Q8WVX3 66 aa5.81□□□□□ -1.48
PTPRR-203ENST00000378778 SPENQ96T58 3664 aaKnown RBP5.81□□□□□ -1.48
PTPRR-203ENST00000378778 A0A0U1RRA0 63 aa5.8□□□□□ -1.48
PTPRR-203ENST00000378778 IGHV4-59P01825 116 aa5.8□□□□□ -1.48
PTPRR-203ENST00000378778 DEFB112Q30KQ8 113 aa5.8□□□□□ -1.48
PTPRR-203ENST00000378778 LINC01356Q8N9X3 169 aa5.8□□□□□ -1.48
PTPRR-203ENST00000378778 DYNLRB2Q8TF09 96 aa5.8□□□□□ -1.48
PTPRR-203ENST00000378778 ZNF702PQ9H963 129 aa5.8□□□□□ -1.48
PTPRR-203ENST00000378778 USP9XQ93008 2570 aaPredicted RBP5.8□□□□□ -1.48
PTPRR-203ENST00000378778 LECT2O14960 151 aa5.8□□□□□ -1.48
PTPRR-203ENST00000378778 TMEM86BQ8N661 226 aa5.8□□□□□ -1.48
PTPRR-203ENST00000378778 Q96MF0 132 aa5.8□□□□□ -1.48
PTPRR-203ENST00000378778 ABCA2Q9BZC7 2435 aa5.8□□□□□ -1.48
PTPRR-203ENST00000378778 IGHV3OR16-9A0A0B4J2B5 98 aa5.79□□□□□ -1.48
PTPRR-203ENST00000378778 MRAPQ8TCY5 172 aa5.79□□□□□ -1.48
PTPRR-203ENST00000378778 TRGV1A0A0A0MS02 117 aa5.79□□□□□ -1.48
PTPRR-203ENST00000378778 IGKV3D-7A0A0C4DH55 119 aa5.79□□□□□ -1.48
PTPRR-203ENST00000378778 PDE6GP18545 87 aa5.79□□□□□ -1.48
PTPRR-203ENST00000378778 ATP5J2P56134 94 aa5.79□□□□□ -1.48
PTPRR-203ENST00000378778 DEFB114Q30KQ6 69 aa5.79□□□□□ -1.48
PTPRR-203ENST00000378778 Q6YL49 198 aa5.79□□□□□ -1.48
PTPRR-203ENST00000378778 IGHV4-30-2A0A087WSY4 118 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 COX17Q14061 63 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 C16orf74Q96GX8 76 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 UBL5Q9BZL1 73 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 X6R8D5 127 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 HECTD1Q9ULT8 2610 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 ZNF462Q96JM2 2506 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 EPM2AB3EWF7 344 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 FSHBP01225 129 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 STHQ8IWL8 128 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 TACC2O95359 2948 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 Q8IZM0 81 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 C1orf158Q8N1D5 194 aa5.78□□□□□ -1.48
PTPRR-203ENST00000378778 BBC3Q96PG8 261 aaPredicted RBP5.78□□□□□ -1.48
PTPRR-203ENST00000378778 TENM4Q6N022 2769 aa5.77□□□□□ -1.49
PTPRR-203ENST00000378778 TRAV7A0A075B6U4 112 aa5.77□□□□□ -1.49
PTPRR-203ENST00000378778 PAX4O43316 350 aa5.77□□□□□ -1.49
PTPRR-203ENST00000378778 C10orf99Q6UWK7 81 aa5.77□□□□□ -1.49
PTPRR-203ENST00000378778 Q8N814 137 aa5.77□□□□□ -1.49
PTPRR-203ENST00000378778 HRNRQ86YZ3 2850 aaPredicted RBP5.77□□□□□ -1.49
PTPRR-203ENST00000378778 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
PTPRR-203ENST00000378778 AVPP01185 164 aa5.77□□□□□ -1.49
PTPRR-203ENST00000378778 SLURP1P55000 103 aa5.77□□□□□ -1.49
PTPRR-203ENST00000378778 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
PTPRR-203ENST00000378778 SERP1Q9Y6X1 66 aa5.77□□□□□ -1.49
PTPRR-203ENST00000378778 SS18Q15532 418 aa5.76□□□□□ -1.49
PTPRR-203ENST00000378778 NCR3O14931 201 aa5.76□□□□□ -1.49
PTPRR-203ENST00000378778 NDUFC1O43677 76 aa5.76□□□□□ -1.49
PTPRR-203ENST00000378778 TRBV6-8A0A0A6YYG3 113 aa5.75□□□□□ -1.49
PTPRR-203ENST00000378778 TOMM7Q9P0U1 55 aa5.75□□□□□ -1.49
PTPRR-203ENST00000378778 FAM236DA0A1B0GTK5 79 aa5.75□□□□□ -1.49
PTPRR-203ENST00000378778 A0A1B0GUV1 79 aa5.75□□□□□ -1.49
PTPRR-203ENST00000378778 C19orf84I3L1E1 186 aa5.75□□□□□ -1.49
PTPRR-203ENST00000378778 FAM236CP0DP71 79 aa5.75□□□□□ -1.49
PTPRR-203ENST00000378778 LCE2DQ5TA82 110 aaPredicted RBP5.75□□□□□ -1.49
PTPRR-203ENST00000378778 SPTBN1Q01082 2364 aaKnown RBP5.74□□□□□ -1.49
PTPRR-203ENST00000378778 SPTA1P02549 2419 aa5.74□□□□□ -1.49
PTPRR-203ENST00000378778 PTPRQQ9UMZ3 2332 aa5.74□□□□□ -1.49
PTPRR-203ENST00000378778 ODF3L2Q3SX64 289 aa5.74□□□□□ -1.49
PTPRR-203ENST00000378778 C6orf226Q5I0X4 101 aa5.74□□□□□ -1.49
PTPRR-203ENST00000378778 C9orf129Q5T035 196 aaKnown RBP5.74□□□□□ -1.49
PTPRR-203ENST00000378778 Q6ZTI0 123 aa5.74□□□□□ -1.49
PTPRR-203ENST00000378778 XCL2Q9UBD3 114 aa5.74□□□□□ -1.49
PTPRR-203ENST00000378778 ADGRG4Q8IZF6 3080 aa5.74□□□□□ -1.49
PTPRR-203ENST00000378778 COL12A1Q99715 3063 aa5.74□□□□□ -1.49
PTPRR-203ENST00000378778 KLKP1Q107X0 134 aa5.74□□□□□ -1.49
PTPRR-203ENST00000378778 Q5XG85 94 aa5.74□□□□□ -1.49
PTPRR-203ENST00000378778 TLN1Q9Y490 2541 aaKnown RBP5.73□□□□□ -1.49
PTPRR-203ENST00000378778 BSNQ9UPA5 3926 aa5.73□□□□□ -1.49
PTPRR-203ENST00000378778 A0A087WVE0 104 aa5.73□□□□□ -1.49
PTPRR-203ENST00000378778 LINC00959A0A1B0GUT2 108 aa5.73□□□□□ -1.49
PTPRR-203ENST00000378778 PRM2P04554 102 aa5.73□□□□□ -1.49
PTPRR-203ENST00000378778 CXCL6P80162 114 aa5.73□□□□□ -1.49
PTPRR-203ENST00000378778 KIR2DL5BQ8NHK3 375 aa5.73□□□□□ -1.49
PTPRR-203ENST00000378778 CYSTM1Q9H1C7 97 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms