RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 FAM236AA0A1B0GUQ0 79 aa12.78□□□□□ -0.36
GNE-201ENST00000377902 FAM236BA0A1B0GV22 79 aa12.78□□□□□ -0.36
GNE-201ENST00000377902 FSHBP01225 129 aa12.78□□□□□ -0.36
GNE-201ENST00000377902 IGHV4-31P0DP07 118 aa12.78□□□□□ -0.36
GNE-201ENST00000377902 PLA2G2AP14555 144 aa12.77□□□□□ -0.36
GNE-201ENST00000377902 NOP10Q9NPE3 64 aaKnown RBP12.77□□□□□ -0.36
GNE-201ENST00000377902 NAV2Q8IVL1 2488 aa12.77□□□□□ -0.36
GNE-201ENST00000377902 ZFYVE26Q68DK2 2539 aa12.77□□□□□ -0.36
GNE-201ENST00000377902 CR1P17927 2039 aa12.77□□□□□ -0.37
GNE-201ENST00000377902 SMIM20Q8N5G0 67 aa12.76□□□□□ -0.37
GNE-201ENST00000377902 IL17DQ8TAD2 202 aa12.76□□□□□ -0.37
GNE-201ENST00000377902 FAM19A3Q7Z5A8 133 aa12.76□□□□□ -0.37
GNE-201ENST00000377902 TOMM7Q9P0U1 55 aa12.76□□□□□ -0.37
GNE-201ENST00000377902 CSDC2Q9Y534 153 aaKnown RBP12.76□□□□□ -0.37
GNE-201ENST00000377902 KRTAP10-9P60411 292 aa12.75□□□□□ -0.37
GNE-201ENST00000377902 LINC00337Q8N6G1 96 aa12.75□□□□□ -0.37
GNE-201ENST00000377902 MIR7-3HGQ8N6C7 128 aa12.74□□□□□ -0.37
GNE-201ENST00000377902 C9orf129Q5T035 196 aaKnown RBP12.74□□□□□ -0.37
GNE-201ENST00000377902 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
GNE-201ENST00000377902 UBE2L6O14933 153 aa12.73□□□□□ -0.37
GNE-201ENST00000377902 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
GNE-201ENST00000377902 TRACP01848 142 aa12.73□□□□□ -0.37
GNE-201ENST00000377902 WFDC10AQ9H1F0 79 aa12.73□□□□□ -0.37
GNE-201ENST00000377902 HIST2H2BCQ6DN03 193 aa12.72□□□□□ -0.37
GNE-201ENST00000377902 GAGE2AQ6NT46 116 aa12.72□□□□□ -0.37
GNE-201ENST00000377902 TRBV10-1A0A0K0K1A3 114 aa12.71□□□□□ -0.37
GNE-201ENST00000377902 ACYP1P07311 99 aa12.71□□□□□ -0.37
GNE-201ENST00000377902 HERV-K104P63124 156 aa12.71□□□□□ -0.37
GNE-201ENST00000377902 TMEM243Q9BU79 118 aa12.71□□□□□ -0.37
GNE-201ENST00000377902 A0A087WYN8 130 aa12.71□□□□□ -0.38
GNE-201ENST00000377902 COPS9Q8WXC6 57 aa12.71□□□□□ -0.38
GNE-201ENST00000377902 SND1-IT1Q9HBX3 110 aa12.7□□□□□ -0.38
GNE-201ENST00000377902 ZNF462Q96JM2 2506 aa12.7□□□□□ -0.38
GNE-201ENST00000377902 IGLV4-60A0A075B6I1 120 aa12.7□□□□□ -0.38
GNE-201ENST00000377902 COX7B2Q8TF08 81 aa12.69□□□□□ -0.38
GNE-201ENST00000377902 CRPP02741 224 aa12.69□□□□□ -0.38
GNE-201ENST00000377902 ATP5G1P05496 136 aa12.69□□□□□ -0.38
GNE-201ENST00000377902 GIG44P09565 113 aaPredicted RBP12.69□□□□□ -0.38
GNE-201ENST00000377902 LINC00158P58513 81 aa12.69□□□□□ -0.38
GNE-201ENST00000377902 LINC00643Q86TS7 51 aa12.69□□□□□ -0.38
GNE-201ENST00000377902 TRGV2A0A075B6R0 118 aa12.68□□□□□ -0.38
GNE-201ENST00000377902 PRB1P04280 392 aa12.68□□□□□ -0.38
GNE-201ENST00000377902 SMIM11BQ8TCY0 68 aa12.68□□□□□ -0.38
GNE-201ENST00000377902 MALP21145 153 aa12.68□□□□□ -0.38
GNE-201ENST00000377902 PFN2P35080 140 aa12.67□□□□□ -0.38
GNE-201ENST00000377902 RPL28P46779 137 aaKnown RBP12.67□□□□□ -0.38
GNE-201ENST00000377902 PLAC8L1A1L4L8 177 aa12.67□□□□□ -0.38
GNE-201ENST00000377902 RPL35AP18077 110 aaKnown RBP12.67□□□□□ -0.38
GNE-201ENST00000377902 TRAV13-2A0A0B4J235 113 aa12.66□□□□□ -0.38
GNE-201ENST00000377902 C11orf68Q9H3H3 251 aaKnown RBP12.66□□□□□ -0.38
GNE-201ENST00000377902 CCDC168Q8NDH2 2452 aa12.65□□□□□ -0.38
GNE-201ENST00000377902 SDIM1Q6ZPB5 146 aa12.65□□□□□ -0.38
GNE-201ENST00000377902 C5orf38Q86SI9 138 aa12.65□□□□□ -0.38
GNE-201ENST00000377902 IMUPQ9GZP8 106 aa12.65□□□□□ -0.38
GNE-201ENST00000377902 CCL18P55774 89 aa12.65□□□□□ -0.39
GNE-201ENST00000377902 C14orf132Q9NPU4 83 aa12.65□□□□□ -0.39
GNE-201ENST00000377902 CCL24O00175 119 aa12.64□□□□□ -0.39
GNE-201ENST00000377902 SLPIP03973 132 aa12.63□□□□□ -0.39
GNE-201ENST00000377902 FAM222AQ5U5X8 452 aa12.62□□□□□ -0.39
GNE-201ENST00000377902 FN1P02751 2386 aaKnown RBP12.62□□□□□ -0.39
GNE-201ENST00000377902 TRGV4A0A0C4DH28 118 aa12.62□□□□□ -0.39
GNE-201ENST00000377902 IGHV3OR16-9A0A0B4J2B5 98 aa12.61□□□□□ -0.39
GNE-201ENST00000377902 APCP25054 2843 aa12.61□□□□□ -0.39
GNE-201ENST00000377902 ITPR3Q14573 2671 aa12.61□□□□□ -0.39
GNE-201ENST00000377902 DNAL4O96015 105 aa12.61□□□□□ -0.39
GNE-201ENST00000377902 FAM110AQ9BQ89 295 aa12.61□□□□□ -0.39
GNE-201ENST00000377902 PF4P02776 101 aa12.6□□□□□ -0.39
GNE-201ENST00000377902 INAFM2P0DMQ5 153 aa12.6□□□□□ -0.39
GNE-201ENST00000377902 LECT2O14960 151 aa12.6□□□□□ -0.39
GNE-201ENST00000377902 OR13C6PQ8NH95 151 aa12.6□□□□□ -0.39
GNE-201ENST00000377902 NBEAL2Q6ZNJ1 2754 aa12.59□□□□□ -0.39
GNE-201ENST00000377902 TRAV25A0A0B4J276 109 aa12.59□□□□□ -0.39
GNE-201ENST00000377902 C9orf153Q5TBE3 101 aa12.59□□□□□ -0.39
GNE-201ENST00000377902 PAX4O43316 350 aa12.59□□□□□ -0.39
GNE-201ENST00000377902 TRBV6-8A0A0A6YYG3 113 aa12.58□□□□□ -0.4
GNE-201ENST00000377902 NCR3O14931 201 aa12.58□□□□□ -0.4
GNE-201ENST00000377902 KLK5Q9Y337 293 aaPredicted RBP12.58□□□□□ -0.4
GNE-201ENST00000377902 C3orf22Q8N5N4 141 aa12.58□□□□□ -0.4
GNE-201ENST00000377902 IGKV3D-7A0A0C4DH55 119 aa12.57□□□□□ -0.4
GNE-201ENST00000377902 TRBV6-4A0A1B0GX49 114 aa12.57□□□□□ -0.4
GNE-201ENST00000377902 DNAJC9-AS1A6NH13 148 aa12.57□□□□□ -0.4
GNE-201ENST00000377902 C16orf74Q96GX8 76 aa12.57□□□□□ -0.4
GNE-201ENST00000377902 ESM1Q9NQ30 184 aa12.57□□□□□ -0.4
GNE-201ENST00000377902 FHL2Q14192 279 aa12.56□□□□□ -0.4
GNE-201ENST00000377902 LRRC75A-AS1Q8N1F1 130 aa12.56□□□□□ -0.4
GNE-201ENST00000377902 DEFB113Q30KQ7 82 aa12.56□□□□□ -0.4
GNE-201ENST00000377902 CLPSL2Q6UWE3 100 aa12.56□□□□□ -0.4
GNE-201ENST00000377902 LINC00846Q9NV44 126 aa12.56□□□□□ -0.4
GNE-201ENST00000377902 PRR3P79522 188 aaKnown RBP12.55□□□□□ -0.4
GNE-201ENST00000377902 PPDPFQ9H3Y8 114 aa12.55□□□□□ -0.4
GNE-201ENST00000377902 A0A087WZ39 114 aa12.55□□□□□ -0.4
GNE-201ENST00000377902 FLNAP21333 2647 aaKnown RBP12.54□□□□□ -0.4
GNE-201ENST00000377902 XCL1P47992 114 aa12.54□□□□□ -0.4
GNE-201ENST00000377902 DEFB130BP0DP73 79 aa12.54□□□□□ -0.4
GNE-201ENST00000377902 DEFB130AP0DP74 79 aa12.54□□□□□ -0.4
GNE-201ENST00000377902 CSNK1G2-AS1Q8NCQ2 148 aa12.54□□□□□ -0.4
GNE-201ENST00000377902 TMEM126AQ9H061 195 aa12.54□□□□□ -0.4
GNE-201ENST00000377902 UBR5O95071 2799 aaPredicted RBP12.53□□□□□ -0.4
GNE-201ENST00000377902 IBA57-AS1B1ANH7 110 aa12.53□□□□□ -0.4
GNE-201ENST00000377902 GCN1Q92616 2671 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms