RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 SNCGO76070 127 aa12.91□□□□□ -0.34
SF1-203ENST00000377387 ANK3Q12955 4377 aaKnown RBP12.91□□□□□ -0.34
SF1-203ENST00000377387 GCN1Q92616 2671 aaKnown RBP12.9□□□□□ -0.34
SF1-203ENST00000377387 IFITM1P13164 125 aa12.9□□□□□ -0.34
SF1-203ENST00000377387 TOMM7Q9P0U1 55 aa12.9□□□□□ -0.34
SF1-203ENST00000377387 LST1O00453 97 aa12.89□□□□□ -0.35
SF1-203ENST00000377387 CDC42SE2Q9NRR3 84 aa12.89□□□□□ -0.35
SF1-203ENST00000377387 IGLV5-39A0A0G2JS06 123 aa12.89□□□□□ -0.35
SF1-203ENST00000377387 ANAPC13Q9BS18 74 aa12.89□□□□□ -0.35
SF1-203ENST00000377387 VWFP04275 2813 aa12.89□□□□□ -0.35
SF1-203ENST00000377387 TIMM17BO60830 172 aa12.89□□□□□ -0.35
SF1-203ENST00000377387 M0QXV9 152 aa12.88□□□□□ -0.35
SF1-203ENST00000377387 GAGE6Q13070 117 aa12.88□□□□□ -0.35
SF1-203ENST00000377387 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
SF1-203ENST00000377387 DAZ4Q86SG3 579 aaKnown RBP12.88□□□□□ -0.35
SF1-203ENST00000377387 DAZ3Q9NR90 486 aaKnown RBP12.88□□□□□ -0.35
SF1-203ENST00000377387 TTC32Q5I0X7 151 aa12.87□□□□□ -0.35
SF1-203ENST00000377387 IL17DQ8TAD2 202 aa12.87□□□□□ -0.35
SF1-203ENST00000377387 GIG44P09565 113 aaPredicted RBP12.87□□□□□ -0.35
SF1-203ENST00000377387 GAGE2BQ13066 116 aa12.87□□□□□ -0.35
SF1-203ENST00000377387 GAGE2EQ4V326 116 aa12.87□□□□□ -0.35
SF1-203ENST00000377387 C15orf53Q8NAA6 179 aa12.87□□□□□ -0.35
SF1-203ENST00000377387 GAGE2DQ9UEU5 116 aa12.87□□□□□ -0.35
SF1-203ENST00000377387 TRAV25A0A0B4J276 109 aa12.86□□□□□ -0.35
SF1-203ENST00000377387 TMEM243Q9BU79 118 aa12.86□□□□□ -0.35
SF1-203ENST00000377387 TRGV4A0A0C4DH28 118 aa12.85□□□□□ -0.35
SF1-203ENST00000377387 TRBV10-1A0A0K0K1A3 114 aa12.85□□□□□ -0.35
SF1-203ENST00000377387 CLUHP3Q96NS8 147 aa12.85□□□□□ -0.35
SF1-203ENST00000377387 CITED1Q99966 193 aa12.85□□□□□ -0.35
SF1-203ENST00000377387 LRRC75A-AS1Q8N1F1 130 aa12.84□□□□□ -0.35
SF1-203ENST00000377387 F5H768 121 aa12.84□□□□□ -0.35
SF1-203ENST00000377387 H3BT86 120 aa12.84□□□□□ -0.35
SF1-203ENST00000377387 LINC01006Q8NI28 216 aa12.82□□□□□ -0.36
SF1-203ENST00000377387 PLAC8L1A1L4L8 177 aa12.82□□□□□ -0.36
SF1-203ENST00000377387 SMR3AQ99954 134 aa12.82□□□□□ -0.36
SF1-203ENST00000377387 CSDC2Q9Y534 153 aaKnown RBP12.82□□□□□ -0.36
SF1-203ENST00000377387 OTOGQ6ZRI0 2925 aa12.81□□□□□ -0.36
SF1-203ENST00000377387 IGLV4-60A0A075B6I1 120 aa12.81□□□□□ -0.36
SF1-203ENST00000377387 TMEM86BQ8N661 226 aa12.81□□□□□ -0.36
SF1-203ENST00000377387 CHCHD5Q9BSY4 110 aa12.81□□□□□ -0.36
SF1-203ENST00000377387 DEFB130BP0DP73 79 aa12.8□□□□□ -0.36
SF1-203ENST00000377387 DEFB130AP0DP74 79 aa12.8□□□□□ -0.36
SF1-203ENST00000377387 C11orf68Q9H3H3 251 aaKnown RBP12.8□□□□□ -0.36
SF1-203ENST00000377387 COX7A2LO14548 114 aa12.79□□□□□ -0.36
SF1-203ENST00000377387 MIR7-3HGQ8N6C7 128 aa12.79□□□□□ -0.36
SF1-203ENST00000377387 C5orf38Q86SI9 138 aa12.78□□□□□ -0.36
SF1-203ENST00000377387 C16orf74Q96GX8 76 aa12.78□□□□□ -0.36
SF1-203ENST00000377387 LINC00158P58513 81 aa12.78□□□□□ -0.36
SF1-203ENST00000377387 FAM218AQ96MZ4 157 aa12.77□□□□□ -0.36
SF1-203ENST00000377387 Q9HAA7 133 aa12.77□□□□□ -0.36
SF1-203ENST00000377387 PFN2P35080 140 aa12.77□□□□□ -0.37
SF1-203ENST00000377387 NHLRC4P0CG21 123 aaPredicted RBP12.76□□□□□ -0.37
SF1-203ENST00000377387 COX7B2Q8TF08 81 aa12.76□□□□□ -0.37
SF1-203ENST00000377387 LINC01600Q96MT4 127 aa12.76□□□□□ -0.37
SF1-203ENST00000377387 TENM1Q9UKZ4 2725 aa12.76□□□□□ -0.37
SF1-203ENST00000377387 NDUFV3P56181 108 aaKnown RBP12.76□□□□□ -0.37
SF1-203ENST00000377387 SHISA2Q6UWI4 295 aa12.76□□□□□ -0.37
SF1-203ENST00000377387 A0A096LPF7 62 aa12.75□□□□□ -0.37
SF1-203ENST00000377387 FAM19A3Q7Z5A8 133 aa12.75□□□□□ -0.37
SF1-203ENST00000377387 HERV-K104P63124 156 aa12.75□□□□□ -0.37
SF1-203ENST00000377387 C19orf73Q9NVV2 129 aa12.75□□□□□ -0.37
SF1-203ENST00000377387 BAALC-AS2P0C853 105 aa12.74□□□□□ -0.37
SF1-203ENST00000377387 KRTAP1-1Q07627 177 aa12.74□□□□□ -0.37
SF1-203ENST00000377387 CLPSL2Q6UWE3 100 aa12.74□□□□□ -0.37
SF1-203ENST00000377387 COPS9Q8WXC6 57 aa12.74□□□□□ -0.37
SF1-203ENST00000377387 B5MCH6 92 aa12.74□□□□□ -0.37
SF1-203ENST00000377387 TRBV6-4A0A1B0GX49 114 aa12.73□□□□□ -0.37
SF1-203ENST00000377387 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
SF1-203ENST00000377387 FHL2Q14192 279 aa12.73□□□□□ -0.37
SF1-203ENST00000377387 TRBV6-8A0A0A6YYG3 113 aa12.73□□□□□ -0.37
SF1-203ENST00000377387 LINC00337Q8N6G1 96 aa12.73□□□□□ -0.37
SF1-203ENST00000377387 CSNK1G2-AS1Q8NCQ2 148 aa12.73□□□□□ -0.37
SF1-203ENST00000377387 SND1-IT1Q9HBX3 110 aa12.73□□□□□ -0.37
SF1-203ENST00000377387 CRPP02741 224 aa12.72□□□□□ -0.37
SF1-203ENST00000377387 SS18L2Q9UHA2 77 aa12.71□□□□□ -0.37
SF1-203ENST00000377387 ATRQ13535 2644 aa12.7□□□□□ -0.38
SF1-203ENST00000377387 IGKV2-28A0A075B6P5 120 aa12.7□□□□□ -0.38
SF1-203ENST00000377387 CCDC179H3BU77 68 aa12.7□□□□□ -0.38
SF1-203ENST00000377387 IGKV2D-28P01615 120 aa12.7□□□□□ -0.38
SF1-203ENST00000377387 XCL1P47992 114 aa12.69□□□□□ -0.38
SF1-203ENST00000377387 TRRAPQ9Y4A5 3859 aa12.69□□□□□ -0.38
SF1-203ENST00000377387 OR13C6PQ8NH95 151 aa12.68□□□□□ -0.38
SF1-203ENST00000377387 OVOL2Q9BRP0 275 aa12.68□□□□□ -0.38
SF1-203ENST00000377387 IGHV3OR16-9A0A0B4J2B5 98 aa12.68□□□□□ -0.38
SF1-203ENST00000377387 ATP5G1P05496 136 aa12.68□□□□□ -0.38
SF1-203ENST00000377387 CMC4P56277 68 aaPredicted RBP12.68□□□□□ -0.38
SF1-203ENST00000377387 DEFB121Q5J5C9 76 aa12.68□□□□□ -0.38
SF1-203ENST00000377387 PAX4O43316 350 aa12.67□□□□□ -0.38
SF1-203ENST00000377387 CCL18P55774 89 aa12.67□□□□□ -0.38
SF1-203ENST00000377387 TRAV13-2A0A0B4J235 113 aa12.67□□□□□ -0.38
SF1-203ENST00000377387 GYPEP15421 78 aa12.67□□□□□ -0.38
SF1-203ENST00000377387 C6orf226Q5I0X4 101 aa12.66□□□□□ -0.38
SF1-203ENST00000377387 SMIM11BQ8TCY0 68 aa12.66□□□□□ -0.38
SF1-203ENST00000377387 DEFB4AO15263 64 aa12.66□□□□□ -0.38
SF1-203ENST00000377387 RNASE1P07998 156 aaKnown RBP12.65□□□□□ -0.38
SF1-203ENST00000377387 A0A087WYN8 130 aa12.65□□□□□ -0.38
SF1-203ENST00000377387 TRACP01848 142 aa12.65□□□□□ -0.38
SF1-203ENST00000377387 SMCR5Q8TEV8 140 aa12.65□□□□□ -0.39
SF1-203ENST00000377387 C22orf24Q9Y442 160 aa12.65□□□□□ -0.39
SF1-203ENST00000377387 LINC00959A0A1B0GUT2 108 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms