RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
FXN-201ENST00000377270 LINC00315P59091 139 aa11.25□□□□□ -0.61
FXN-201ENST00000377270 PRR15Q8IV56 129 aa11.25□□□□□ -0.61
FXN-201ENST00000377270 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
FXN-201ENST00000377270 NXPH4O95158 308 aa11.25□□□□□ -0.61
FXN-201ENST00000377270 Q6ZRU5 148 aa11.25□□□□□ -0.61
FXN-201ENST00000377270 KIF25-AS1Q9Y6Z4 181 aa11.25□□□□□ -0.61
FXN-201ENST00000377270 DOPEY2Q9Y3R5 2298 aa11.25□□□□□ -0.61
FXN-201ENST00000377270 A8MZ25 164 aa11.24□□□□□ -0.61
FXN-201ENST00000377270 GNRH2O43555 120 aa11.24□□□□□ -0.61
FXN-201ENST00000377270 COX7A2LO14548 114 aa11.23□□□□□ -0.61
FXN-201ENST00000377270 RNASE3P12724 160 aaKnown RBP11.23□□□□□ -0.61
FXN-201ENST00000377270 SUMO4Q6EEV6 95 aa11.23□□□□□ -0.61
FXN-201ENST00000377270 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
FXN-201ENST00000377270 UBR5O95071 2799 aaPredicted RBP11.23□□□□□ -0.61
FXN-201ENST00000377270 ABCA12Q86UK0 2595 aa11.23□□□□□ -0.61
FXN-201ENST00000377270 TRBV27A0A0K0K1C4 114 aa11.22□□□□□ -0.61
FXN-201ENST00000377270 KRTAP10-9P60411 292 aa11.22□□□□□ -0.61
FXN-201ENST00000377270 BEAN1Q3B7T3 259 aa11.22□□□□□ -0.61
FXN-201ENST00000377270 ZNF843Q8N446 348 aa11.22□□□□□ -0.61
FXN-201ENST00000377270 SOSTDC1Q6X4U4 206 aa11.22□□□□□ -0.61
FXN-201ENST00000377270 MXRA5Q9NR99 2828 aa11.22□□□□□ -0.61
FXN-201ENST00000377270 NAV2Q8IVL1 2488 aa11.21□□□□□ -0.61
FXN-201ENST00000377270 F8WEM9 126 aa11.21□□□□□ -0.61
FXN-201ENST00000377270 FAM222AQ5U5X8 452 aa11.21□□□□□ -0.61
FXN-201ENST00000377270 VSIG2Q96IQ7 327 aa11.21□□□□□ -0.61
FXN-201ENST00000377270 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.62
FXN-201ENST00000377270 IGHV4-31P0DP07 118 aa11.21□□□□□ -0.62
FXN-201ENST00000377270 S100A7L2Q5SY68 101 aa11.21□□□□□ -0.62
FXN-201ENST00000377270 WFDC9Q8NEX5 89 aa11.21□□□□□ -0.62
FXN-201ENST00000377270 A0A0J9YXV3 536 aa11.2□□□□□ -0.62
FXN-201ENST00000377270 MIAQ16674 131 aa11.2□□□□□ -0.62
FXN-201ENST00000377270 Q8N2B8 174 aa11.2□□□□□ -0.62
FXN-201ENST00000377270 F5H697 171 aa11.2□□□□□ -0.62
FXN-201ENST00000377270 FAM229BQ4G0N7 80 aa11.2□□□□□ -0.62
FXN-201ENST00000377270 Q6YL49 198 aa11.2□□□□□ -0.62
FXN-201ENST00000377270 MRPL55Q7Z7F7 128 aaKnown RBP11.2□□□□□ -0.62
FXN-201ENST00000377270 SNURFQ9Y675 71 aa11.2□□□□□ -0.62
FXN-201ENST00000377270 RMI2Q96E14 147 aa11.19□□□□□ -0.62
FXN-201ENST00000377270 C14orf132Q9NPU4 83 aa11.19□□□□□ -0.62
FXN-201ENST00000377270 KLLNB2CW77 178 aa11.19□□□□□ -0.62
FXN-201ENST00000377270 TRBV6-5A0A0K0K1A5 114 aa11.18□□□□□ -0.62
FXN-201ENST00000377270 PLAC8L1A1L4L8 177 aa11.18□□□□□ -0.62
FXN-201ENST00000377270 A0A087WWL8 130 aa11.18□□□□□ -0.62
FXN-201ENST00000377270 FSHBP01225 129 aa11.18□□□□□ -0.62
FXN-201ENST00000377270 TEX15Q9BXT5 2789 aa11.17□□□□□ -0.62
FXN-201ENST00000377270 MUC4Q99102 2169 aa11.17□□□□□ -0.62
FXN-201ENST00000377270 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
FXN-201ENST00000377270 KLKP1Q107X0 134 aa11.17□□□□□ -0.62
FXN-201ENST00000377270 ZNF702PQ9H963 129 aa11.17□□□□□ -0.62
FXN-201ENST00000377270 EPG5Q9HCE0 2579 aa11.17□□□□□ -0.62
FXN-201ENST00000377270 CREBBPQ92793 2442 aa11.17□□□□□ -0.62
FXN-201ENST00000377270 DEFB113Q30KQ7 82 aa11.16□□□□□ -0.62
FXN-201ENST00000377270 C9orf129Q5T035 196 aaKnown RBP11.16□□□□□ -0.62
FXN-201ENST00000377270 Q9HAA7 133 aa11.16□□□□□ -0.62
FXN-201ENST00000377270 NDUFA12Q9UI09 145 aa11.15□□□□□ -0.62
FXN-201ENST00000377270 IGLV4-3A0A075B6K6 122 aa11.15□□□□□ -0.62
FXN-201ENST00000377270 HOXD3P31249 432 aaPredicted RBP11.15□□□□□ -0.62
FXN-201ENST00000377270 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.62
FXN-201ENST00000377270 C11orf45Q8TAV5 145 aa11.15□□□□□ -0.62
FXN-201ENST00000377270 FAM218AQ96MZ4 157 aa11.15□□□□□ -0.62
FXN-201ENST00000377270 CR1P17927 2039 aa11.14□□□□□ -0.63
FXN-201ENST00000377270 K7EQG2 157 aa11.14□□□□□ -0.63
FXN-201ENST00000377270 UBE2E2Q96LR5 201 aa11.14□□□□□ -0.63
FXN-201ENST00000377270 SORL1Q92673 2214 aa11.14□□□□□ -0.63
FXN-201ENST00000377270 IGHV1-58A0A0C4DH39 117 aa11.13□□□□□ -0.63
FXN-201ENST00000377270 TRAV7A0A075B6U4 112 aa11.12□□□□□ -0.63
FXN-201ENST00000377270 FAM74A4Q5TZK3 123 aa11.12□□□□□ -0.63
FXN-201ENST00000377270 C6orf223Q8N319 242 aa11.12□□□□□ -0.63
FXN-201ENST00000377270 Q9UF83 564 aa11.11□□□□□ -0.63
FXN-201ENST00000377270 MYO9AB2RTY4 2548 aa11.11□□□□□ -0.63
FXN-201ENST00000377270 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
FXN-201ENST00000377270 DEFB136Q30KP8 78 aa11.11□□□□□ -0.63
FXN-201ENST00000377270 C18orf65Q6ZTR6 163 aa11.11□□□□□ -0.63
FXN-201ENST00000377270 M0QY20 66 aa11.1□□□□□ -0.63
FXN-201ENST00000377270 ENHOQ6UWT2 76 aa11.1□□□□□ -0.63
FXN-201ENST00000377270 TLN2Q9Y4G6 2542 aa11.1□□□□□ -0.63
FXN-201ENST00000377270 DAD1P61803 113 aa11.1□□□□□ -0.63
FXN-201ENST00000377270 RBM12B-AS1Q9P1G2 102 aa11.1□□□□□ -0.63
FXN-201ENST00000377270 SLURP1P55000 103 aa11.09□□□□□ -0.63
FXN-201ENST00000377270 LAMTOR3Q9UHA4 124 aa11.09□□□□□ -0.63
FXN-201ENST00000377270 APCP25054 2843 aa11.09□□□□□ -0.63
FXN-201ENST00000377270 TRAV13-2A0A0B4J235 113 aa11.09□□□□□ -0.63
FXN-201ENST00000377270 IGHV3-16A0A0C4DH30 117 aa11.08□□□□□ -0.64
FXN-201ENST00000377270 ATP5EP56381 51 aaPredicted RBP11.08□□□□□ -0.64
FXN-201ENST00000377270 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.08□□□□□ -0.64
FXN-201ENST00000377270 CD28P10747 220 aa11.07□□□□□ -0.64
FXN-201ENST00000377270 IGHV1OR15-1A0A075B7D0 117 aa11.07□□□□□ -0.64
FXN-201ENST00000377270 A0A087WZ39 114 aa11.07□□□□□ -0.64
FXN-201ENST00000377270 IBA57-AS1B1ANH7 110 aa11.05□□□□□ -0.64
FXN-201ENST00000377270 KHDC1LQ5JSQ8 128 aa11.05□□□□□ -0.64
FXN-201ENST00000377270 KRTAP1-3Q8IUG1 177 aa11.05□□□□□ -0.64
FXN-201ENST00000377270 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
FXN-201ENST00000377270 ZNF469Q96JG9 3925 aaPredicted RBP11.05□□□□□ -0.64
FXN-201ENST00000377270 ATP5EP2Q5VTU8 51 aa11.05□□□□□ -0.64
FXN-201ENST00000377270 DEFB131AP59861 70 aa11.04□□□□□ -0.64
FXN-201ENST00000377270 HIST2H2BDQ6DRA6 164 aa11.04□□□□□ -0.64
FXN-201ENST00000377270 SONP18583 2426 aaKnown RBP11.04□□□□□ -0.64
FXN-201ENST00000377270 ITPR3Q14573 2671 aa11.03□□□□□ -0.64
FXN-201ENST00000377270 OBSCN-AS1Q96MR7 158 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms