RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 CCL25O15444 150 aa11.69□□□□□ -0.54
HLA-A-202ENST00000376806 IGHV3-30P01768 117 aa11.69□□□□□ -0.54
HLA-A-202ENST00000376806 IGHV3-30-5P0DP03 117 aa11.69□□□□□ -0.54
HLA-A-202ENST00000376806 NOTCH1P46531 2555 aa11.69□□□□□ -0.54
HLA-A-202ENST00000376806 F5H768 121 aa11.68□□□□□ -0.54
HLA-A-202ENST00000376806 DNAH3Q8TD57 4116 aa11.68□□□□□ -0.54
HLA-A-202ENST00000376806 TRAV26-1A0A087WT03 109 aa11.68□□□□□ -0.54
HLA-A-202ENST00000376806 SMIM1B2RUZ4 78 aa11.68□□□□□ -0.54
HLA-A-202ENST00000376806 TMEM238C9JI98 176 aa11.68□□□□□ -0.54
HLA-A-202ENST00000376806 NBEAL1Q6ZS30 2694 aa11.67□□□□□ -0.54
HLA-A-202ENST00000376806 HTN3P15516 51 aa11.67□□□□□ -0.54
HLA-A-202ENST00000376806 A0A1W2PPM0 123 aa11.66□□□□□ -0.54
HLA-A-202ENST00000376806 SAMD5Q5TGI4 173 aa11.66□□□□□ -0.54
HLA-A-202ENST00000376806 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
HLA-A-202ENST00000376806 NDUFA1O15239 70 aa11.65□□□□□ -0.54
HLA-A-202ENST00000376806 LITAFQ99732 161 aa11.64□□□□□ -0.55
HLA-A-202ENST00000376806 A0A1B0GUV1 79 aa11.63□□□□□ -0.55
HLA-A-202ENST00000376806 IGLL5B9A064 214 aa11.63□□□□□ -0.55
HLA-A-202ENST00000376806 RBX1P62877 108 aa11.63□□□□□ -0.55
HLA-A-202ENST00000376806 TMEM262E9PQX1 116 aa11.63□□□□□ -0.55
HLA-A-202ENST00000376806 C11orf68Q9H3H3 251 aaKnown RBP11.63□□□□□ -0.55
HLA-A-202ENST00000376806 ICOSQ9Y6W8 199 aa11.63□□□□□ -0.55
HLA-A-202ENST00000376806 K7EP34 96 aa11.62□□□□□ -0.55
HLA-A-202ENST00000376806 FABP2P12104 132 aa11.62□□□□□ -0.55
HLA-A-202ENST00000376806 MRPL23Q16540 153 aaKnown RBP11.62□□□□□ -0.55
HLA-A-202ENST00000376806 GAGE10A6NGK3 116 aa11.61□□□□□ -0.55
HLA-A-202ENST00000376806 SPANXDQ9BXN6 97 aa11.61□□□□□ -0.55
HLA-A-202ENST00000376806 SPANXCQ9NY87 97 aa11.61□□□□□ -0.55
HLA-A-202ENST00000376806 TIMM17BO60830 172 aa11.61□□□□□ -0.55
HLA-A-202ENST00000376806 GTF2H5Q6ZYL4 71 aa11.61□□□□□ -0.55
HLA-A-202ENST00000376806 LINC00959A0A1B0GUT2 108 aa11.6□□□□□ -0.55
HLA-A-202ENST00000376806 APOMO95445 188 aa11.6□□□□□ -0.55
HLA-A-202ENST00000376806 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
HLA-A-202ENST00000376806 SH2D6Q7Z4S9 175 aa11.6□□□□□ -0.55
HLA-A-202ENST00000376806 MUSTN1Q8IVN3 82 aa11.6□□□□□ -0.55
HLA-A-202ENST00000376806 Q9H8V8 135 aa11.6□□□□□ -0.55
HLA-A-202ENST00000376806 SPCS1Q9Y6A9 102 aa11.6□□□□□ -0.55
HLA-A-202ENST00000376806 ADAMTSL4-AS1Q5T5F5 129 aa11.59□□□□□ -0.55
HLA-A-202ENST00000376806 IGHV3OR16-9A0A0B4J2B5 98 aa11.59□□□□□ -0.55
HLA-A-202ENST00000376806 A4D1N5 150 aa11.59□□□□□ -0.55
HLA-A-202ENST00000376806 CFC1BP0CG36 223 aa11.59□□□□□ -0.55
HLA-A-202ENST00000376806 CFC1P0CG37 223 aa11.59□□□□□ -0.55
HLA-A-202ENST00000376806 MIAQ16674 131 aa11.59□□□□□ -0.55
HLA-A-202ENST00000376806 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
HLA-A-202ENST00000376806 ZNF625Q96I27 306 aaPredicted RBP11.57□□□□□ -0.56
HLA-A-202ENST00000376806 PRB2P02812 416 aaPredicted RBP11.57□□□□□ -0.56
HLA-A-202ENST00000376806 LELP1Q5T871 98 aa11.57□□□□□ -0.56
HLA-A-202ENST00000376806 CLPSL2Q6UWE3 100 aa11.57□□□□□ -0.56
HLA-A-202ENST00000376806 A0A087WZ39 114 aa11.56□□□□□ -0.56
HLA-A-202ENST00000376806 TSPAN13O95857 204 aa11.56□□□□□ -0.56
HLA-A-202ENST00000376806 SS18Q15532 418 aa11.56□□□□□ -0.56
HLA-A-202ENST00000376806 A0A0J9YWU9 116 aa11.55□□□□□ -0.56
HLA-A-202ENST00000376806 Q6ZTC4 211 aa11.55□□□□□ -0.56
HLA-A-202ENST00000376806 Q8N3U1 123 aa11.55□□□□□ -0.56
HLA-A-202ENST00000376806 COX7B2Q8TF08 81 aa11.55□□□□□ -0.56
HLA-A-202ENST00000376806 A0A0B4J2C4 111 aa11.55□□□□□ -0.56
HLA-A-202ENST00000376806 EIF4EBP3O60516 100 aaPredicted RBP11.55□□□□□ -0.56
HLA-A-202ENST00000376806 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.54□□□□□ -0.56
HLA-A-202ENST00000376806 PRSS2P07478 247 aa11.54□□□□□ -0.56
HLA-A-202ENST00000376806 HERV-K104P63124 156 aa11.54□□□□□ -0.56
HLA-A-202ENST00000376806 CIRBPQ14011 172 aaKnown RBP11.54□□□□□ -0.56
HLA-A-202ENST00000376806 C5orf38Q86SI9 138 aa11.54□□□□□ -0.56
HLA-A-202ENST00000376806 H3BNG1 76 aa11.53□□□□□ -0.56
HLA-A-202ENST00000376806 XCL1P47992 114 aa11.53□□□□□ -0.56
HLA-A-202ENST00000376806 LINC00269Q8N2A0 174 aa11.53□□□□□ -0.56
HLA-A-202ENST00000376806 PRO1854Q9UHT4 67 aa11.53□□□□□ -0.56
HLA-A-202ENST00000376806 ANGP03950 147 aaKnown RBP11.53□□□□□ -0.56
HLA-A-202ENST00000376806 IFITM1P13164 125 aa11.53□□□□□ -0.56
HLA-A-202ENST00000376806 NPC2P61916 151 aa11.53□□□□□ -0.56
HLA-A-202ENST00000376806 KPRPQ5T749 579 aaPredicted RBP11.53□□□□□ -0.56
HLA-A-202ENST00000376806 DAND5Q8N907 189 aa11.52□□□□□ -0.57
HLA-A-202ENST00000376806 TOMM7Q9P0U1 55 aa11.52□□□□□ -0.57
HLA-A-202ENST00000376806 TENM3Q9P273 2699 aa11.51□□□□□ -0.57
HLA-A-202ENST00000376806 MEIG1Q5JSS6 88 aa11.51□□□□□ -0.57
HLA-A-202ENST00000376806 K7EIL1 84 aa11.51□□□□□ -0.57
HLA-A-202ENST00000376806 REG3AQ06141 175 aa11.51□□□□□ -0.57
HLA-A-202ENST00000376806 LYPD5Q6UWN5 251 aa11.51□□□□□ -0.57
HLA-A-202ENST00000376806 NANOS2P60321 138 aaKnown RBP11.5□□□□□ -0.57
HLA-A-202ENST00000376806 SPATA25Q9BR10 227 aa11.5□□□□□ -0.57
HLA-A-202ENST00000376806 IGHV3-33P01772 117 aa11.49□□□□□ -0.57
HLA-A-202ENST00000376806 C11orf45Q8TAV5 145 aa11.49□□□□□ -0.57
HLA-A-202ENST00000376806 A0A0U1RRA0 63 aa11.49□□□□□ -0.57
HLA-A-202ENST00000376806 LINC01561Q8N1V8 128 aa11.49□□□□□ -0.57
HLA-A-202ENST00000376806 LINC00308Q8TCZ7 52 aa11.49□□□□□ -0.57
HLA-A-202ENST00000376806 CHCHD10Q8WYQ3 142 aaPredicted RBP11.48□□□□□ -0.57
HLA-A-202ENST00000376806 SFTA2Q6UW10 78 aa11.47□□□□□ -0.57
HLA-A-202ENST00000376806 CD164L2Q6UWJ8 174 aa11.47□□□□□ -0.57
HLA-A-202ENST00000376806 TM2D3Q9BRN9 247 aa11.47□□□□□ -0.57
HLA-A-202ENST00000376806 LOC107984156A0A0G2JMH3 177 aa11.46□□□□□ -0.57
HLA-A-202ENST00000376806 LYRM7Q5U5X0 104 aa11.46□□□□□ -0.57
HLA-A-202ENST00000376806 ARL17AQ8IVW1 177 aa11.46□□□□□ -0.57
HLA-A-202ENST00000376806 IGLV10-54A0A075B6I4 117 aa11.46□□□□□ -0.58
HLA-A-202ENST00000376806 DEFB131BA0A096LNP1 70 aa11.46□□□□□ -0.58
HLA-A-202ENST00000376806 COPS9Q8WXC6 57 aa11.46□□□□□ -0.58
HLA-A-202ENST00000376806 ERG28Q9UKR5 140 aa11.46□□□□□ -0.58
HLA-A-202ENST00000376806 SOSTDC1Q6X4U4 206 aa11.45□□□□□ -0.58
HLA-A-202ENST00000376806 COX7A2LO14548 114 aa11.44□□□□□ -0.58
HLA-A-202ENST00000376806 MEGF8Q7Z7M0 2845 aa11.44□□□□□ -0.58
HLA-A-202ENST00000376806 Q8IZM0 81 aa11.44□□□□□ -0.58
HLA-A-202ENST00000376806 H3BMG7 143 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms