RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 TRAV8-3A0A0A6YYJ7 113 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 H7C423 109 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 J3QQQ9 107 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 LGALS3P17931 250 aaKnown RBP9□□□□□ -0.97
TRIM40-206ENST00000376724 TM2D2Q9BX73 214 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 IGLV4-60A0A075B6I1 120 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 IGKV3OR2-268A0A0C4DH90 116 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 IGLL5B9A064 214 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 TMEM262E9PQX1 116 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 SPINK8P0C7L1 97 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 COX6A2Q02221 97 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 C12orf74Q32Q52 190 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 PLEKHB2Q96CS7 222 aa9□□□□□ -0.97
TRIM40-206ENST00000376724 LEPROTO15243 131 aa8.99□□□□□ -0.97
TRIM40-206ENST00000376724 DEFB121Q5J5C9 76 aa8.99□□□□□ -0.97
TRIM40-206ENST00000376724 SH2D6Q7Z4S9 175 aa8.99□□□□□ -0.97
TRIM40-206ENST00000376724 CEND1Q8N111 149 aa8.99□□□□□ -0.97
TRIM40-206ENST00000376724 CDKN2A-AS1Q9UH64 79 aa8.99□□□□□ -0.97
TRIM40-206ENST00000376724 DNAH3Q8TD57 4116 aa8.99□□□□□ -0.97
TRIM40-206ENST00000376724 K7ERJ3 54 aa8.98□□□□□ -0.97
TRIM40-206ENST00000376724 ETDBQ3ZM63 59 aa8.98□□□□□ -0.97
TRIM40-206ENST00000376724 LINC00242Q5T6M2 205 aa8.98□□□□□ -0.97
TRIM40-206ENST00000376724 HIST1H4GQ99525 98 aa8.98□□□□□ -0.97
TRIM40-206ENST00000376724 NHP2Q9NX24 153 aaKnown RBP8.98□□□□□ -0.97
TRIM40-206ENST00000376724 NOTCH1P46531 2555 aa8.98□□□□□ -0.97
TRIM40-206ENST00000376724 A0A0J9YWU9 116 aa8.98□□□□□ -0.97
TRIM40-206ENST00000376724 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
TRIM40-206ENST00000376724 MRAPQ8TCY5 172 aa8.98□□□□□ -0.97
TRIM40-206ENST00000376724 TIRAPP58753 221 aa8.97□□□□□ -0.97
TRIM40-206ENST00000376724 PRO0461Q9UI25 63 aa8.97□□□□□ -0.97
TRIM40-206ENST00000376724 H3BMG7 143 aa8.97□□□□□ -0.97
TRIM40-206ENST00000376724 HERVK_113P63121 156 aa8.97□□□□□ -0.97
TRIM40-206ENST00000376724 IGHV1-58A0A0C4DH39 117 aa8.96□□□□□ -0.98
TRIM40-206ENST00000376724 K7EIL1 84 aa8.96□□□□□ -0.98
TRIM40-206ENST00000376724 TSPAN13O95857 204 aa8.96□□□□□ -0.98
TRIM40-206ENST00000376724 MRPL23Q16540 153 aaKnown RBP8.96□□□□□ -0.98
TRIM40-206ENST00000376724 TAL2Q16559 108 aa8.96□□□□□ -0.98
TRIM40-206ENST00000376724 Q6ZTC4 211 aa8.96□□□□□ -0.98
TRIM40-206ENST00000376724 C11orf68Q9H3H3 251 aaKnown RBP8.95□□□□□ -0.98
TRIM40-206ENST00000376724 ICOSQ9Y6W8 199 aa8.95□□□□□ -0.98
TRIM40-206ENST00000376724 SRSF9Q13242 221 aaKnown RBP eCLIP8.95□□□□□ -0.98
TRIM40-206ENST00000376724 IGLV5-45A0A087WSX0 123 aa8.94□□□□□ -0.98
TRIM40-206ENST00000376724 NANOS2P60321 138 aaKnown RBP8.93□□□□□ -0.98
TRIM40-206ENST00000376724 FAM19A3Q7Z5A8 133 aa8.93□□□□□ -0.98
TRIM40-206ENST00000376724 FOXI1Q12951 378 aa8.93□□□□□ -0.98
TRIM40-206ENST00000376724 CLPSL2Q6UWE3 100 aa8.93□□□□□ -0.98
TRIM40-206ENST00000376724 CDIP1Q9H305 208 aa8.93□□□□□ -0.98
TRIM40-206ENST00000376724 Q8N3U1 123 aa8.92□□□□□ -0.98
TRIM40-206ENST00000376724 C11orf45Q8TAV5 145 aa8.92□□□□□ -0.98
TRIM40-206ENST00000376724 A0A1B0GWB2 263 aa8.92□□□□□ -0.98
TRIM40-206ENST00000376724 APOMO95445 188 aa8.92□□□□□ -0.98
TRIM40-206ENST00000376724 C10orf126Q8N4M7 172 aa8.92□□□□□ -0.98
TRIM40-206ENST00000376724 NDUFA12Q9UI09 145 aa8.92□□□□□ -0.98
TRIM40-206ENST00000376724 ERG28Q9UKR5 140 aa8.92□□□□□ -0.98
TRIM40-206ENST00000376724 NBEAL1Q6ZS30 2694 aa8.91□□□□□ -0.98
TRIM40-206ENST00000376724 TENM3Q9P273 2699 aa8.91□□□□□ -0.98
TRIM40-206ENST00000376724 A0A1B0GUV1 79 aa8.91□□□□□ -0.98
TRIM40-206ENST00000376724 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.98
TRIM40-206ENST00000376724 KPRPQ5T749 579 aaPredicted RBP8.9□□□□□ -0.98
TRIM40-206ENST00000376724 A0A0J9YXY3 114 aa8.9□□□□□ -0.99
TRIM40-206ENST00000376724 LINC00959A0A1B0GUT2 108 aa8.9□□□□□ -0.99
TRIM40-206ENST00000376724 MT-ATP8P03928 68 aa8.89□□□□□ -0.99
TRIM40-206ENST00000376724 ANGP03950 147 aaKnown RBP8.89□□□□□ -0.99
TRIM40-206ENST00000376724 LELP1Q5T871 98 aa8.89□□□□□ -0.99
TRIM40-206ENST00000376724 ZFAND6Q6FIF0 208 aa8.89□□□□□ -0.99
TRIM40-206ENST00000376724 TM2D3Q9BRN9 247 aa8.89□□□□□ -0.99
TRIM40-206ENST00000376724 MGAM2Q2M2H8 2515 aa8.89□□□□□ -0.99
TRIM40-206ENST00000376724 DEFB131BA0A096LNP1 70 aa8.88□□□□□ -0.99
TRIM40-206ENST00000376724 IGLV5-39A0A0G2JS06 123 aa8.88□□□□□ -0.99
TRIM40-206ENST00000376724 LYPD5Q6UWN5 251 aa8.88□□□□□ -0.99
TRIM40-206ENST00000376724 LINC00269Q8N2A0 174 aa8.88□□□□□ -0.99
TRIM40-206ENST00000376724 XCL1P47992 114 aa8.88□□□□□ -0.99
TRIM40-206ENST00000376724 PGPEP1Q9NXJ5 209 aa8.88□□□□□ -0.99
TRIM40-206ENST00000376724 IGHV3-30P01768 117 aa8.87□□□□□ -0.99
TRIM40-206ENST00000376724 IGHV3-30-5P0DP03 117 aa8.87□□□□□ -0.99
TRIM40-206ENST00000376724 SS18Q15532 418 aa8.87□□□□□ -0.99
TRIM40-206ENST00000376724 C5orf38Q86SI9 138 aa8.87□□□□□ -0.99
TRIM40-206ENST00000376724 ZNF625Q96I27 306 aaPredicted RBP8.87□□□□□ -0.99
TRIM40-206ENST00000376724 Q9H8V8 135 aa8.87□□□□□ -0.99
TRIM40-206ENST00000376724 IGHV3OR16-9A0A0B4J2B5 98 aa8.86□□□□□ -0.99
TRIM40-206ENST00000376724 H3BNG1 76 aa8.86□□□□□ -0.99
TRIM40-206ENST00000376724 SMCPP49901 116 aaPredicted RBP8.86□□□□□ -0.99
TRIM40-206ENST00000376724 XGP55808 180 aa8.86□□□□□ -0.99
TRIM40-206ENST00000376724 TOMM7Q9P0U1 55 aa8.86□□□□□ -0.99
TRIM40-206ENST00000376724 SS18L2Q9UHA2 77 aa8.86□□□□□ -0.99
TRIM40-206ENST00000376724 IGLV10-54A0A075B6I4 117 aa8.85□□□□□ -0.99
TRIM40-206ENST00000376724 NDUFA1O15239 70 aa8.85□□□□□ -0.99
TRIM40-206ENST00000376724 REG3AQ06141 175 aa8.85□□□□□ -0.99
TRIM40-206ENST00000376724 IGHV3-33P01772 117 aa8.84□□□□□ -0.99
TRIM40-206ENST00000376724 PRSS2P07478 247 aa8.84□□□□□ -0.99
TRIM40-206ENST00000376724 ADAMTSL4-AS1Q5T5F5 129 aa8.84□□□□□ -0.99
TRIM40-206ENST00000376724 MUSTN1Q8IVN3 82 aa8.84□□□□□ -0.99
TRIM40-206ENST00000376724 LITAFQ99732 161 aa8.84□□□□□ -0.99
TRIM40-206ENST00000376724 ANAPC13Q9BS18 74 aa8.84□□□□□ -0.99
TRIM40-206ENST00000376724 A0A087WZ39 114 aa8.83□□□□□ -1
TRIM40-206ENST00000376724 NPC2P61916 151 aa8.83□□□□□ -1
TRIM40-206ENST00000376724 PPDPFLQ8WWR9 84 aa8.83□□□□□ -1
TRIM40-206ENST00000376724 A0A0U1RRA0 63 aa8.83□□□□□ -1
TRIM40-206ENST00000376724 DAND5Q8N907 189 aa8.83□□□□□ -1
TRIM40-206ENST00000376724 COX7B2Q8TF08 81 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms