RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 TM2D2Q9BX73 214 aa8.03□□□□□ -1.12
HDAC6-203ENST00000376619 NBPF19A0A087WUL8 3843 aa8.02□□□□□ -1.13
HDAC6-203ENST00000376619 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
HDAC6-203ENST00000376619 HILS1P60008 231 aa8.02□□□□□ -1.13
HDAC6-203ENST00000376619 DAZ2Q13117 558 aaKnown RBP8.02□□□□□ -1.13
HDAC6-203ENST00000376619 DAZ4Q86SG3 579 aaKnown RBP8.02□□□□□ -1.13
HDAC6-203ENST00000376619 SND1-IT1Q9HBX3 110 aa8.02□□□□□ -1.13
HDAC6-203ENST00000376619 DAZ3Q9NR90 486 aaKnown RBP8.02□□□□□ -1.13
HDAC6-203ENST00000376619 APOC4P55056 127 aa8.02□□□□□ -1.13
HDAC6-203ENST00000376619 C9orf66Q5T8R8 295 aa8.02□□□□□ -1.13
HDAC6-203ENST00000376619 ZMAT4Q9H898 229 aa8.02□□□□□ -1.13
HDAC6-203ENST00000376619 IGKV2D-24A0A075B6R9 120 aa8.01□□□□□ -1.13
HDAC6-203ENST00000376619 GAGE2EQ4V326 116 aa8.01□□□□□ -1.13
HDAC6-203ENST00000376619 ANKRD29Q8N6D5 301 aa8.01□□□□□ -1.13
HDAC6-203ENST00000376619 GAGE2DQ9UEU5 116 aa8.01□□□□□ -1.13
HDAC6-203ENST00000376619 TRBV20-1A0A075B6N2 111 aa8.01□□□□□ -1.13
HDAC6-203ENST00000376619 SCGB1A1P11684 91 aa8.01□□□□□ -1.13
HDAC6-203ENST00000376619 ZNF575Q86XF7 245 aa8.01□□□□□ -1.13
HDAC6-203ENST00000376619 UBE2D4Q9Y2X8 147 aa8.01□□□□□ -1.13
HDAC6-203ENST00000376619 HIGD2BQ4VC39 106 aa8.01□□□□□ -1.13
HDAC6-203ENST00000376619 ADAMTSL4-AS1Q5T5F5 129 aa8.01□□□□□ -1.13
HDAC6-203ENST00000376619 IGLV4-60A0A075B6I1 120 aa8□□□□□ -1.13
HDAC6-203ENST00000376619 TRAV25A0A0B4J276 109 aa8□□□□□ -1.13
HDAC6-203ENST00000376619 ODF3Q96PU9 254 aa8□□□□□ -1.13
HDAC6-203ENST00000376619 TEX49A0A1B0GTD5 131 aa8□□□□□ -1.13
HDAC6-203ENST00000376619 RBX1P62877 108 aa8□□□□□ -1.13
HDAC6-203ENST00000376619 PDZD2O15018 2839 aa8□□□□□ -1.13
HDAC6-203ENST00000376619 ZNF561-AS1K7EIQ3 104 aa8□□□□□ -1.13
HDAC6-203ENST00000376619 COPS9Q8WXC6 57 aa8□□□□□ -1.13
HDAC6-203ENST00000376619 ICOSQ9Y6W8 199 aa8□□□□□ -1.13
HDAC6-203ENST00000376619 VPS13CQ709C8 3753 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 TRBV6-5A0A0K0K1A5 114 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 COX7B2Q8TF08 81 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 PRO0255Q9UI72 69 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 SLPIP03973 132 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 LAMTOR3Q9UHA4 124 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 BRI3O95415 125 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 SPART-AS1P0CW21 52 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 GAGE2BQ13066 116 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 DNAJC30Q96LL9 226 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 XAGE1AQ9HD64 81 aa7.99□□□□□ -1.13
HDAC6-203ENST00000376619 PRR3P79522 188 aaKnown RBP7.98□□□□□ -1.13
HDAC6-203ENST00000376619 LINC01620Q4KN68 170 aa7.98□□□□□ -1.13
HDAC6-203ENST00000376619 RNF152Q8N8N0 203 aa7.98□□□□□ -1.13
HDAC6-203ENST00000376619 PPDPFLQ8WWR9 84 aa7.98□□□□□ -1.13
HDAC6-203ENST00000376619 NCR3O14931 201 aa7.98□□□□□ -1.13
HDAC6-203ENST00000376619 TRIAP1O43715 76 aa7.97□□□□□ -1.13
HDAC6-203ENST00000376619 C9orf116Q5BN46 136 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-203ENST00000376619 SVIPQ8NHG7 77 aa7.97□□□□□ -1.13
HDAC6-203ENST00000376619 IGHV4-28A0A0C4DH34 117 aa7.97□□□□□ -1.13
HDAC6-203ENST00000376619 LECT2O14960 151 aa7.97□□□□□ -1.13
HDAC6-203ENST00000376619 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
HDAC6-203ENST00000376619 Q8N3U1 123 aa7.97□□□□□ -1.13
HDAC6-203ENST00000376619 ANAPC13Q9BS18 74 aa7.97□□□□□ -1.13
HDAC6-203ENST00000376619 CHCHD7Q9BUK0 85 aa7.97□□□□□ -1.13
HDAC6-203ENST00000376619 TRBV6-8A0A0A6YYG3 113 aa7.97□□□□□ -1.13
HDAC6-203ENST00000376619 HIST1H4AP62805 103 aaKnown RBP7.97□□□□□ -1.13
HDAC6-203ENST00000376619 A0A096LNT2 108 aa7.96□□□□□ -1.13
HDAC6-203ENST00000376619 IGLV1-51P01701 117 aa7.96□□□□□ -1.13
HDAC6-203ENST00000376619 BAALC-AS2P0C853 105 aa7.96□□□□□ -1.14
HDAC6-203ENST00000376619 FOXI1Q12951 378 aa7.96□□□□□ -1.14
HDAC6-203ENST00000376619 VWFP04275 2813 aa7.95□□□□□ -1.14
HDAC6-203ENST00000376619 ZFAND6Q6FIF0 208 aa7.95□□□□□ -1.14
HDAC6-203ENST00000376619 TRBV10-1A0A0K0K1A3 114 aa7.95□□□□□ -1.14
HDAC6-203ENST00000376619 COX7A2LO14548 114 aa7.95□□□□□ -1.14
HDAC6-203ENST00000376619 FAM19A4Q96LR4 140 aa7.95□□□□□ -1.14
HDAC6-203ENST00000376619 G3V4G9 280 aa7.95□□□□□ -1.14
HDAC6-203ENST00000376619 C15orf53Q8NAA6 179 aa7.95□□□□□ -1.14
HDAC6-203ENST00000376619 CLUHP3Q96NS8 147 aa7.95□□□□□ -1.14
HDAC6-203ENST00000376619 KRTAP1-3Q8IUG1 177 aa7.94□□□□□ -1.14
HDAC6-203ENST00000376619 MRPL23Q16540 153 aaKnown RBP7.94□□□□□ -1.14
HDAC6-203ENST00000376619 MIAQ16674 131 aa7.94□□□□□ -1.14
HDAC6-203ENST00000376619 C11orf72Q8NBR9 251 aa7.94□□□□□ -1.14
HDAC6-203ENST00000376619 NTM-AS1Q6ZSK4 140 aa7.94□□□□□ -1.14
HDAC6-203ENST00000376619 TENM1Q9UKZ4 2725 aa7.94□□□□□ -1.14
HDAC6-203ENST00000376619 IGHV4-30-4P0DP06 118 aa7.93□□□□□ -1.14
HDAC6-203ENST00000376619 TEN1Q86WV5 123 aa7.93□□□□□ -1.14
HDAC6-203ENST00000376619 DEFB105AQ8NG35 78 aa7.93□□□□□ -1.14
HDAC6-203ENST00000376619 LINC00308Q8TCZ7 52 aa7.93□□□□□ -1.14
HDAC6-203ENST00000376619 SPANXB1Q9NS25 103 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-203ENST00000376619 UBE2D1P51668 147 aa7.93□□□□□ -1.14
HDAC6-203ENST00000376619 UBE2DNLQ8IWF7 75 aa7.93□□□□□ -1.14
HDAC6-203ENST00000376619 SPATA3Q8NHX4 192 aa7.93□□□□□ -1.14
HDAC6-203ENST00000376619 OTOGQ6ZRI0 2925 aa7.93□□□□□ -1.14
HDAC6-203ENST00000376619 REG3AQ06141 175 aa7.93□□□□□ -1.14
HDAC6-203ENST00000376619 CDC42SE2Q9NRR3 84 aa7.92□□□□□ -1.14
HDAC6-203ENST00000376619 PSCAO43653 123 aa7.92□□□□□ -1.14
HDAC6-203ENST00000376619 CHCHD10Q8WYQ3 142 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-203ENST00000376619 MT-ATP8P03928 68 aa7.92□□□□□ -1.14
HDAC6-203ENST00000376619 UBE2D3P61077 147 aa7.92□□□□□ -1.14
HDAC6-203ENST00000376619 UBE2D2P62837 147 aa7.92□□□□□ -1.14
HDAC6-203ENST00000376619 SPAG11BQ08648 103 aa7.92□□□□□ -1.14
HDAC6-203ENST00000376619 RPL18AQ02543 176 aaKnown RBP7.91□□□□□ -1.14
HDAC6-203ENST00000376619 MRPS36P82909 103 aaKnown RBP7.91□□□□□ -1.14
HDAC6-203ENST00000376619 CAMK2N2Q96S95 79 aa7.91□□□□□ -1.14
HDAC6-203ENST00000376619 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-203ENST00000376619 TRBV6-4A0A1B0GX49 114 aa7.89□□□□□ -1.15
HDAC6-203ENST00000376619 FHL2Q14192 279 aa7.89□□□□□ -1.15
HDAC6-203ENST00000376619 UFSP1Q6NVU6 142 aa7.89□□□□□ -1.15
HDAC6-203ENST00000376619 PYGO1Q9Y3Y4 419 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms