RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 MRPS36P82909 103 aaKnown RBP10.41□□□□□ -0.74
TNFRSF1B-201ENST00000376259 J3QLI3 93 aa10.41□□□□□ -0.74
TNFRSF1B-201ENST00000376259 RPL32P62910 135 aaKnown RBP10.4□□□□□ -0.74
TNFRSF1B-201ENST00000376259 MXRA5Q9NR99 2828 aa10.4□□□□□ -0.74
TNFRSF1B-201ENST00000376259 TMEM89A2RUT3 159 aa10.4□□□□□ -0.74
TNFRSF1B-201ENST00000376259 CCDC179H3BU77 68 aa10.4□□□□□ -0.74
TNFRSF1B-201ENST00000376259 DEFB113Q30KQ7 82 aa10.4□□□□□ -0.74
TNFRSF1B-201ENST00000376259 ODF3L2Q3SX64 289 aa10.4□□□□□ -0.74
TNFRSF1B-201ENST00000376259 EDA2RQ9HAV5 297 aa10.4□□□□□ -0.74
TNFRSF1B-201ENST00000376259 NDUFV3P56181 108 aaKnown RBP10.39□□□□□ -0.75
TNFRSF1B-201ENST00000376259 LINC00242Q5T6M2 205 aa10.39□□□□□ -0.75
TNFRSF1B-201ENST00000376259 ODF3Q96PU9 254 aa10.39□□□□□ -0.75
TNFRSF1B-201ENST00000376259 HELZ2Q9BYK8 2649 aaKnown RBP10.39□□□□□ -0.75
TNFRSF1B-201ENST00000376259 DAZ2Q13117 558 aaKnown RBP10.39□□□□□ -0.75
TNFRSF1B-201ENST00000376259 DAZ4Q86SG3 579 aaKnown RBP10.39□□□□□ -0.75
TNFRSF1B-201ENST00000376259 DAZ3Q9NR90 486 aaKnown RBP10.39□□□□□ -0.75
TNFRSF1B-201ENST00000376259 CFAP161Q6P656 301 aa10.38□□□□□ -0.75
TNFRSF1B-201ENST00000376259 UBR5O95071 2799 aaPredicted RBP10.38□□□□□ -0.75
TNFRSF1B-201ENST00000376259 TRBV30A0A0K0K1B3 111 aa10.38□□□□□ -0.75
TNFRSF1B-201ENST00000376259 LECT2O14960 151 aa10.38□□□□□ -0.75
TNFRSF1B-201ENST00000376259 AMELXQ99217 191 aa10.37□□□□□ -0.75
TNFRSF1B-201ENST00000376259 DNAJC9-AS1A6NH13 148 aa10.37□□□□□ -0.75
TNFRSF1B-201ENST00000376259 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
TNFRSF1B-201ENST00000376259 GYPEP15421 78 aa10.37□□□□□ -0.75
TNFRSF1B-201ENST00000376259 Q8N2B8 174 aa10.37□□□□□ -0.75
TNFRSF1B-201ENST00000376259 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
TNFRSF1B-201ENST00000376259 C14orf132Q9NPU4 83 aa10.37□□□□□ -0.75
TNFRSF1B-201ENST00000376259 PYGO1Q9Y3Y4 419 aa10.36□□□□□ -0.75
TNFRSF1B-201ENST00000376259 ANGP03950 147 aaKnown RBP10.36□□□□□ -0.75
TNFRSF1B-201ENST00000376259 C9orf153Q5TBE3 101 aa10.35□□□□□ -0.75
TNFRSF1B-201ENST00000376259 C1orf158Q8N1D5 194 aa10.35□□□□□ -0.75
TNFRSF1B-201ENST00000376259 TMEM86BQ8N661 226 aa10.35□□□□□ -0.75
TNFRSF1B-201ENST00000376259 COX7B2Q8TF08 81 aa10.35□□□□□ -0.75
TNFRSF1B-201ENST00000376259 C4orf3Q8WVX3 66 aa10.35□□□□□ -0.75
TNFRSF1B-201ENST00000376259 S100A7L2Q5SY68 101 aa10.35□□□□□ -0.75
TNFRSF1B-201ENST00000376259 DNAJC30Q96LL9 226 aa10.35□□□□□ -0.75
TNFRSF1B-201ENST00000376259 H3BT86 120 aa10.34□□□□□ -0.75
TNFRSF1B-201ENST00000376259 LST1O00453 97 aa10.33□□□□□ -0.76
TNFRSF1B-201ENST00000376259 F5H768 121 aa10.33□□□□□ -0.76
TNFRSF1B-201ENST00000376259 SETXQ7Z333 2677 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1B-201ENST00000376259 NDUFA1O15239 70 aa10.32□□□□□ -0.76
TNFRSF1B-201ENST00000376259 LINC00482Q8N8I6 264 aa10.32□□□□□ -0.76
TNFRSF1B-201ENST00000376259 NIPBLQ6KC79 2804 aaeCLIP10.32□□□□□ -0.76
TNFRSF1B-201ENST00000376259 SMIM1B2RUZ4 78 aa10.32□□□□□ -0.76
TNFRSF1B-201ENST00000376259 PRR3P79522 188 aaKnown RBP10.32□□□□□ -0.76
TNFRSF1B-201ENST00000376259 BBC3Q96PG8 261 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF1B-201ENST00000376259 IGLV4-60A0A075B6I1 120 aa10.31□□□□□ -0.76
TNFRSF1B-201ENST00000376259 COX7A2LO14548 114 aa10.31□□□□□ -0.76
TNFRSF1B-201ENST00000376259 SS18Q15532 418 aa10.31□□□□□ -0.76
TNFRSF1B-201ENST00000376259 SDIM1Q6ZPB5 146 aa10.31□□□□□ -0.76
TNFRSF1B-201ENST00000376259 TRAV13-2A0A0B4J235 113 aa10.3□□□□□ -0.76
TNFRSF1B-201ENST00000376259 DEFB135Q30KP9 77 aa10.3□□□□□ -0.76
TNFRSF1B-201ENST00000376259 LAMTOR3Q9UHA4 124 aa10.3□□□□□ -0.76
TNFRSF1B-201ENST00000376259 ITPR2Q14571 2701 aa10.3□□□□□ -0.76
TNFRSF1B-201ENST00000376259 NTM-AS1Q6ZSK4 140 aa10.3□□□□□ -0.76
TNFRSF1B-201ENST00000376259 TEP1Q99973 2627 aaKnown RBP10.29□□□□□ -0.76
TNFRSF1B-201ENST00000376259 NCR3O14931 201 aa10.29□□□□□ -0.76
TNFRSF1B-201ENST00000376259 SPANXDQ9BXN6 97 aa10.29□□□□□ -0.76
TNFRSF1B-201ENST00000376259 SPANXCQ9NY87 97 aa10.29□□□□□ -0.76
TNFRSF1B-201ENST00000376259 SOSTDC1Q6X4U4 206 aa10.29□□□□□ -0.76
TNFRSF1B-201ENST00000376259 SMR3AQ99954 134 aa10.29□□□□□ -0.76
TNFRSF1B-201ENST00000376259 CDC42SE2Q9NRR3 84 aa10.29□□□□□ -0.76
TNFRSF1B-201ENST00000376259 UNC79Q9P2D8 2635 aa10.28□□□□□ -0.76
TNFRSF1B-201ENST00000376259 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
TNFRSF1B-201ENST00000376259 C11orf72Q8NBR9 251 aa10.28□□□□□ -0.76
TNFRSF1B-201ENST00000376259 TIRAPP58753 221 aa10.28□□□□□ -0.76
TNFRSF1B-201ENST00000376259 KLK9Q2XQG4 91 aa10.27□□□□□ -0.76
TNFRSF1B-201ENST00000376259 INAFM2P0DMQ5 153 aa10.27□□□□□ -0.77
TNFRSF1B-201ENST00000376259 LITAFQ99732 161 aa10.27□□□□□ -0.77
TNFRSF1B-201ENST00000376259 HERV-K104P63124 156 aa10.26□□□□□ -0.77
TNFRSF1B-201ENST00000376259 C16orf74Q96GX8 76 aa10.26□□□□□ -0.77
TNFRSF1B-201ENST00000376259 TRBV10-1A0A0K0K1A3 114 aa10.25□□□□□ -0.77
TNFRSF1B-201ENST00000376259 LINC00269Q8N2A0 174 aa10.25□□□□□ -0.77
TNFRSF1B-201ENST00000376259 RNF152Q8N8N0 203 aa10.25□□□□□ -0.77
TNFRSF1B-201ENST00000376259 C9orf116Q5BN46 136 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF1B-201ENST00000376259 LINC01006Q8NI28 216 aa10.25□□□□□ -0.77
TNFRSF1B-201ENST00000376259 SMIM11BQ8TCY0 68 aa10.25□□□□□ -0.77
TNFRSF1B-201ENST00000376259 DAD1P61803 113 aa10.24□□□□□ -0.77
TNFRSF1B-201ENST00000376259 BRI3O95415 125 aa10.23□□□□□ -0.77
TNFRSF1B-201ENST00000376259 HAMPP81172 84 aa10.23□□□□□ -0.77
TNFRSF1B-201ENST00000376259 CCL18P55774 89 aa10.23□□□□□ -0.77
TNFRSF1B-201ENST00000376259 TRBV6-8A0A0A6YYG3 113 aa10.23□□□□□ -0.77
TNFRSF1B-201ENST00000376259 FAM218AQ96MZ4 157 aa10.23□□□□□ -0.77
TNFRSF1B-201ENST00000376259 A0A087WYN8 130 aa10.22□□□□□ -0.77
TNFRSF1B-201ENST00000376259 WFDC9Q8NEX5 89 aa10.22□□□□□ -0.77
TNFRSF1B-201ENST00000376259 LINC00337Q8N6G1 96 aa10.22□□□□□ -0.77
TNFRSF1B-201ENST00000376259 A0A087WVE0 104 aa10.21□□□□□ -0.77
TNFRSF1B-201ENST00000376259 FAM222AQ5U5X8 452 aa10.21□□□□□ -0.77
TNFRSF1B-201ENST00000376259 A0A1B0GX51 115 aa10.21□□□□□ -0.78
TNFRSF1B-201ENST00000376259 ZNF843Q8N446 348 aa10.2□□□□□ -0.78
TNFRSF1B-201ENST00000376259 KLK12Q9UKR0 248 aa10.2□□□□□ -0.78
TNFRSF1B-201ENST00000376259 MGAM2Q2M2H8 2515 aa10.2□□□□□ -0.78
TNFRSF1B-201ENST00000376259 NOTCH1P46531 2555 aa10.19□□□□□ -0.78
TNFRSF1B-201ENST00000376259 A8MTW9 85 aa10.19□□□□□ -0.78
TNFRSF1B-201ENST00000376259 KLK5Q9Y337 293 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF1B-201ENST00000376259 SBSPONQ8IVN8 264 aa10.19□□□□□ -0.78
TNFRSF1B-201ENST00000376259 Q8N3U1 123 aa10.19□□□□□ -0.78
TNFRSF1B-201ENST00000376259 XAGE1AQ9HD64 81 aa10.19□□□□□ -0.78
TNFRSF1B-201ENST00000376259 ORMDL1Q9P0S3 153 aa10.18□□□□□ -0.78
TNFRSF1B-201ENST00000376259 MAST4O15021 2626 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms