RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 LINC00308Q8TCZ7 52 aa8.5□□□□□ -1.05
MCF2L-202ENST00000375597 PDZD2O15018 2839 aa8.5□□□□□ -1.05
MCF2L-202ENST00000375597 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
MCF2L-202ENST00000375597 LITAFQ99732 161 aa8.5□□□□□ -1.05
MCF2L-202ENST00000375597 DNAL4O96015 105 aa8.5□□□□□ -1.05
MCF2L-202ENST00000375597 MRPS36P82909 103 aaKnown RBP8.5□□□□□ -1.05
MCF2L-202ENST00000375597 DAZ2Q13117 558 aaKnown RBP8.5□□□□□ -1.05
MCF2L-202ENST00000375597 SOSTDC1Q6X4U4 206 aa8.5□□□□□ -1.05
MCF2L-202ENST00000375597 DAZ4Q86SG3 579 aaKnown RBP8.5□□□□□ -1.05
MCF2L-202ENST00000375597 DAZ3Q9NR90 486 aaKnown RBP8.5□□□□□ -1.05
MCF2L-202ENST00000375597 FAM104AQ969W3 186 aa8.49□□□□□ -1.05
MCF2L-202ENST00000375597 LINC00242Q5T6M2 205 aa8.49□□□□□ -1.05
MCF2L-202ENST00000375597 PRR3P79522 188 aaKnown RBP8.48□□□□□ -1.05
MCF2L-202ENST00000375597 LINC00526Q96FQ7 95 aa8.48□□□□□ -1.05
MCF2L-202ENST00000375597 NHLRC4P0CG21 123 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-202ENST00000375597 C14orf132Q9NPU4 83 aa8.48□□□□□ -1.05
MCF2L-202ENST00000375597 PEMTQ9UBM1 199 aa8.48□□□□□ -1.05
MCF2L-202ENST00000375597 KLK5Q9Y337 293 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-202ENST00000375597 CITED2Q99967 270 aaPredicted RBP8.47□□□□□ -1.05
MCF2L-202ENST00000375597 CRPP02741 224 aa8.47□□□□□ -1.05
MCF2L-202ENST00000375597 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
MCF2L-202ENST00000375597 YAE1D1Q9NRH1 226 aa8.47□□□□□ -1.05
MCF2L-202ENST00000375597 TRBV30A0A0K0K1B3 111 aa8.47□□□□□ -1.05
MCF2L-202ENST00000375597 ODF3L2Q3SX64 289 aa8.47□□□□□ -1.05
MCF2L-202ENST00000375597 SDIM1Q6ZPB5 146 aa8.46□□□□□ -1.05
MCF2L-202ENST00000375597 SPANXA1Q9NS26 97 aa8.46□□□□□ -1.05
MCF2L-202ENST00000375597 EDA2RQ9HAV5 297 aa8.46□□□□□ -1.06
MCF2L-202ENST00000375597 HERV-K104P63124 156 aa8.45□□□□□ -1.06
MCF2L-202ENST00000375597 NTM-AS1Q6ZSK4 140 aa8.45□□□□□ -1.06
MCF2L-202ENST00000375597 LST1O00453 97 aa8.45□□□□□ -1.06
MCF2L-202ENST00000375597 DEFB114Q30KQ6 69 aa8.45□□□□□ -1.06
MCF2L-202ENST00000375597 HIST1H4AP62805 103 aaKnown RBP8.45□□□□□ -1.06
MCF2L-202ENST00000375597 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
MCF2L-202ENST00000375597 RPL32P62910 135 aaKnown RBP8.44□□□□□ -1.06
MCF2L-202ENST00000375597 WFDC9Q8NEX5 89 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 NBEAL1Q6ZS30 2694 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 IGLV4-60A0A075B6I1 120 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 TMEM89A2RUT3 159 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 LECT2O14960 151 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 C6orf226Q5I0X4 101 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 C1orf158Q8N1D5 194 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 SMIM1B2RUZ4 78 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 NCR3O14931 201 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 CITED1Q99966 193 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 TMEM243Q9BU79 118 aa8.44□□□□□ -1.06
MCF2L-202ENST00000375597 A0A087WVE0 104 aa8.43□□□□□ -1.06
MCF2L-202ENST00000375597 K7EQD1 137 aa8.43□□□□□ -1.06
MCF2L-202ENST00000375597 HERVK_113P63121 156 aa8.43□□□□□ -1.06
MCF2L-202ENST00000375597 SVIPQ8NHG7 77 aa8.43□□□□□ -1.06
MCF2L-202ENST00000375597 CCL24O00175 119 aa8.43□□□□□ -1.06
MCF2L-202ENST00000375597 IGHV4-31P0DP07 118 aa8.42□□□□□ -1.06
MCF2L-202ENST00000375597 C9orf129Q5T035 196 aaKnown RBP8.42□□□□□ -1.06
MCF2L-202ENST00000375597 C9orf153Q5TBE3 101 aa8.42□□□□□ -1.06
MCF2L-202ENST00000375597 Q8N3U1 123 aa8.42□□□□□ -1.06
MCF2L-202ENST00000375597 NOTCH1P46531 2555 aa8.42□□□□□ -1.06
MCF2L-202ENST00000375597 SBSPONQ8IVN8 264 aa8.42□□□□□ -1.06
MCF2L-202ENST00000375597 C11orf72Q8NBR9 251 aa8.42□□□□□ -1.06
MCF2L-202ENST00000375597 A0A087WYN8 130 aa8.41□□□□□ -1.06
MCF2L-202ENST00000375597 NDUFA1O15239 70 aa8.41□□□□□ -1.06
MCF2L-202ENST00000375597 Q6YL49 198 aa8.41□□□□□ -1.06
MCF2L-202ENST00000375597 SMCR5Q8TEV8 140 aa8.41□□□□□ -1.06
MCF2L-202ENST00000375597 PYGO1Q9Y3Y4 419 aa8.41□□□□□ -1.06
MCF2L-202ENST00000375597 A8MTW9 85 aa8.4□□□□□ -1.06
MCF2L-202ENST00000375597 C9orf116Q5BN46 136 aaPredicted RBP8.4□□□□□ -1.06
MCF2L-202ENST00000375597 TIRAPP58753 221 aa8.4□□□□□ -1.07
MCF2L-202ENST00000375597 LINC00337Q8N6G1 96 aa8.39□□□□□ -1.07
MCF2L-202ENST00000375597 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
MCF2L-202ENST00000375597 SPANXCQ9NY87 97 aa8.39□□□□□ -1.07
MCF2L-202ENST00000375597 BAHCC1Q9P281 2608 aa8.39□□□□□ -1.07
MCF2L-202ENST00000375597 COX7A2LO14548 114 aa8.39□□□□□ -1.07
MCF2L-202ENST00000375597 H3BT86 120 aa8.39□□□□□ -1.07
MCF2L-202ENST00000375597 BBC3Q96PG8 261 aaPredicted RBP8.39□□□□□ -1.07
MCF2L-202ENST00000375597 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
MCF2L-202ENST00000375597 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
MCF2L-202ENST00000375597 CR1P17927 2039 aa8.38□□□□□ -1.07
MCF2L-202ENST00000375597 SMIM11BQ8TCY0 68 aa8.37□□□□□ -1.07
MCF2L-202ENST00000375597 SMR3AQ99954 134 aa8.37□□□□□ -1.07
MCF2L-202ENST00000375597 LOC107984640A0A0U1RRK4 108 aa8.37□□□□□ -1.07
MCF2L-202ENST00000375597 SHISA2Q6UWI4 295 aa8.37□□□□□ -1.07
MCF2L-202ENST00000375597 CDC42SE2Q9NRR3 84 aa8.37□□□□□ -1.07
MCF2L-202ENST00000375597 DNAJC9-AS1A6NH13 148 aa8.36□□□□□ -1.07
MCF2L-202ENST00000375597 GYPEP15421 78 aa8.36□□□□□ -1.07
MCF2L-202ENST00000375597 TENM1Q9UKZ4 2725 aa8.36□□□□□ -1.07
MCF2L-202ENST00000375597 DNAJC30Q96LL9 226 aa8.36□□□□□ -1.07
MCF2L-202ENST00000375597 CCL18P55774 89 aa8.35□□□□□ -1.07
MCF2L-202ENST00000375597 PKD1L1Q8TDX9 2849 aa8.34□□□□□ -1.07
MCF2L-202ENST00000375597 hADV29S1A0JD25 119 aa8.34□□□□□ -1.07
MCF2L-202ENST00000375597 PF4P02776 101 aa8.34□□□□□ -1.07
MCF2L-202ENST00000375597 MALP21145 153 aa8.34□□□□□ -1.07
MCF2L-202ENST00000375597 C4orf3Q8WVX3 66 aa8.34□□□□□ -1.07
MCF2L-202ENST00000375597 MAST4O15021 2626 aa8.34□□□□□ -1.08
MCF2L-202ENST00000375597 ANGP03950 147 aaKnown RBP8.33□□□□□ -1.08
MCF2L-202ENST00000375597 CFAP161Q6P656 301 aa8.33□□□□□ -1.08
MCF2L-202ENST00000375597 BRI3O95415 125 aa8.33□□□□□ -1.08
MCF2L-202ENST00000375597 LINC00269Q8N2A0 174 aa8.33□□□□□ -1.08
MCF2L-202ENST00000375597 A0A1B0GX51 115 aa8.32□□□□□ -1.08
MCF2L-202ENST00000375597 DEFB135Q30KP9 77 aa8.32□□□□□ -1.08
MCF2L-202ENST00000375597 DEFB113Q30KQ7 82 aa8.32□□□□□ -1.08
MCF2L-202ENST00000375597 DSCR9P59020 149 aa8.31□□□□□ -1.08
MCF2L-202ENST00000375597 CXCL5P42830 114 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms