RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 COX6A2Q02221 97 aa8.55□□□□□ -1.04
HMGCL-202ENST00000374487 LINC00242Q5T6M2 205 aa8.55□□□□□ -1.04
HMGCL-202ENST00000374487 C9orf66Q5T8R8 295 aa8.55□□□□□ -1.04
HMGCL-202ENST00000374487 IGLV5-45A0A087WSX0 123 aa8.55□□□□□ -1.04
HMGCL-202ENST00000374487 KPRPQ5T749 579 aaPredicted RBP8.55□□□□□ -1.04
HMGCL-202ENST00000374487 SBSPONQ8IVN8 264 aa8.55□□□□□ -1.04
HMGCL-202ENST00000374487 CDC42SE2Q9NRR3 84 aa8.55□□□□□ -1.04
HMGCL-202ENST00000374487 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.54□□□□□ -1.04
HMGCL-202ENST00000374487 PSMB2P49721 201 aa8.54□□□□□ -1.04
HMGCL-202ENST00000374487 FHL2Q14192 279 aa8.54□□□□□ -1.04
HMGCL-202ENST00000374487 WFDC2Q14508 124 aa8.54□□□□□ -1.04
HMGCL-202ENST00000374487 ZFAND6Q6FIF0 208 aa8.54□□□□□ -1.04
HMGCL-202ENST00000374487 SCGB1C2P0DMR2 95 aa8.54□□□□□ -1.04
HMGCL-202ENST00000374487 MTURNQ8N3F0 131 aa8.53□□□□□ -1.04
HMGCL-202ENST00000374487 LITAFQ99732 161 aa8.53□□□□□ -1.04
HMGCL-202ENST00000374487 H7C2G1 150 aa8.52□□□□□ -1.04
HMGCL-202ENST00000374487 H7C423 109 aa8.52□□□□□ -1.04
HMGCL-202ENST00000374487 ADAMTSL4-AS1Q5T5F5 129 aa8.52□□□□□ -1.04
HMGCL-202ENST00000374487 ERG28Q9UKR5 140 aa8.52□□□□□ -1.04
HMGCL-202ENST00000374487 A0A0B4J2C4 111 aa8.52□□□□□ -1.05
HMGCL-202ENST00000374487 FAM19A3Q7Z5A8 133 aa8.52□□□□□ -1.05
HMGCL-202ENST00000374487 KIR2DL5BQ8NHK3 375 aa8.52□□□□□ -1.05
HMGCL-202ENST00000374487 TEX48A0A1B0GUV7 120 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 K7EIL1 84 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 NDUFA1O15239 70 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 CIRBPQ14011 172 aaKnown RBP8.51□□□□□ -1.05
HMGCL-202ENST00000374487 MIAQ16674 131 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 SPANXDQ9BXN6 97 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 SPANXCQ9NY87 97 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 TRBV20-1A0A075B6N2 111 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 TRBV6-8A0A0A6YYG3 113 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 SMIM9A6NGZ8 99 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 EGFEM1PQ0D2K5 195 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 GAGE6Q13070 117 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 Q1RN00 199 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 CHCHD5Q9BSY4 110 aa8.51□□□□□ -1.05
HMGCL-202ENST00000374487 IGLV5-39A0A0G2JS06 123 aa8.5□□□□□ -1.05
HMGCL-202ENST00000374487 IGHV3-33P01772 117 aa8.5□□□□□ -1.05
HMGCL-202ENST00000374487 NPC2P61916 151 aa8.5□□□□□ -1.05
HMGCL-202ENST00000374487 ETDBQ3ZM63 59 aa8.5□□□□□ -1.05
HMGCL-202ENST00000374487 SMIM1B2RUZ4 78 aa8.49□□□□□ -1.05
HMGCL-202ENST00000374487 TIMM17BO60830 172 aa8.49□□□□□ -1.05
HMGCL-202ENST00000374487 SH2D6Q7Z4S9 175 aa8.49□□□□□ -1.05
HMGCL-202ENST00000374487 Q9H8V8 135 aa8.49□□□□□ -1.05
HMGCL-202ENST00000374487 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
HMGCL-202ENST00000374487 X6R8D5 127 aa8.49□□□□□ -1.05
HMGCL-202ENST00000374487 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
HMGCL-202ENST00000374487 TCL1BO95988 128 aa8.49□□□□□ -1.05
HMGCL-202ENST00000374487 IGKV3OR2-268A0A0C4DH90 116 aa8.48□□□□□ -1.05
HMGCL-202ENST00000374487 MRAPQ8TCY5 172 aa8.48□□□□□ -1.05
HMGCL-202ENST00000374487 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
HMGCL-202ENST00000374487 J3QR89 54 aa8.48□□□□□ -1.05
HMGCL-202ENST00000374487 APOC4P55056 127 aa8.48□□□□□ -1.05
HMGCL-202ENST00000374487 DEFB121Q5J5C9 76 aa8.48□□□□□ -1.05
HMGCL-202ENST00000374487 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
HMGCL-202ENST00000374487 DAND5Q8N907 189 aa8.48□□□□□ -1.05
HMGCL-202ENST00000374487 IFITM1P13164 125 aa8.47□□□□□ -1.05
HMGCL-202ENST00000374487 GYPEP15421 78 aa8.47□□□□□ -1.05
HMGCL-202ENST00000374487 DEFB135Q30KP9 77 aa8.47□□□□□ -1.05
HMGCL-202ENST00000374487 TGP01266 2768 aa8.47□□□□□ -1.05
HMGCL-202ENST00000374487 FAM222AQ5U5X8 452 aa8.46□□□□□ -1.05
HMGCL-202ENST00000374487 ATP6V0E2Q8NHE4 81 aa8.46□□□□□ -1.05
HMGCL-202ENST00000374487 A0A0U1RRA0 63 aa8.46□□□□□ -1.06
HMGCL-202ENST00000374487 F5H768 121 aa8.46□□□□□ -1.06
HMGCL-202ENST00000374487 PCP4P48539 62 aa8.46□□□□□ -1.06
HMGCL-202ENST00000374487 PRO0255Q9UI72 69 aa8.46□□□□□ -1.06
HMGCL-202ENST00000374487 IGLV4-60A0A075B6I1 120 aa8.45□□□□□ -1.06
HMGCL-202ENST00000374487 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
HMGCL-202ENST00000374487 MEIG1Q5JSS6 88 aa8.45□□□□□ -1.06
HMGCL-202ENST00000374487 RNF183Q96D59 192 aa8.45□□□□□ -1.06
HMGCL-202ENST00000374487 TMEM262E9PQX1 116 aa8.45□□□□□ -1.06
HMGCL-202ENST00000374487 DEFB4AO15263 64 aa8.45□□□□□ -1.06
HMGCL-202ENST00000374487 HERV-K104P63124 156 aa8.44□□□□□ -1.06
HMGCL-202ENST00000374487 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
HMGCL-202ENST00000374487 DNAH9Q9NYC9 4486 aa8.44□□□□□ -1.06
HMGCL-202ENST00000374487 PAX4O43316 350 aa8.44□□□□□ -1.06
HMGCL-202ENST00000374487 SMCPP49901 116 aaPredicted RBP8.44□□□□□ -1.06
HMGCL-202ENST00000374487 LINC00308Q8TCZ7 52 aa8.43□□□□□ -1.06
HMGCL-202ENST00000374487 A0A096LPF7 62 aa8.42□□□□□ -1.06
HMGCL-202ENST00000374487 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
HMGCL-202ENST00000374487 COX6CP09669 75 aa8.42□□□□□ -1.06
HMGCL-202ENST00000374487 TOMM7Q9P0U1 55 aa8.42□□□□□ -1.06
HMGCL-202ENST00000374487 NBEAL2Q6ZNJ1 2754 aa8.42□□□□□ -1.06
HMGCL-202ENST00000374487 IGHV4-28A0A0C4DH34 117 aa8.42□□□□□ -1.06
HMGCL-202ENST00000374487 TRIAP1O43715 76 aa8.42□□□□□ -1.06
HMGCL-202ENST00000374487 ATXN8Q156A1 80 aa8.42□□□□□ -1.06
HMGCL-202ENST00000374487 COX7B2Q8TF08 81 aa8.42□□□□□ -1.06
HMGCL-202ENST00000374487 ICOSQ9Y6W8 199 aa8.42□□□□□ -1.06
HMGCL-202ENST00000374487 DAD1P61803 113 aa8.41□□□□□ -1.06
HMGCL-202ENST00000374487 C9JAW5 83 aa8.41□□□□□ -1.06
HMGCL-202ENST00000374487 RPL13AP40429 203 aaKnown RBP8.41□□□□□ -1.06
HMGCL-202ENST00000374487 IGHV3OR16-9A0A0B4J2B5 98 aa8.4□□□□□ -1.06
HMGCL-202ENST00000374487 COL7A1Q02388 2944 aa8.4□□□□□ -1.06
HMGCL-202ENST00000374487 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
HMGCL-202ENST00000374487 SLC25A20O43772 301 aa8.39□□□□□ -1.07
HMGCL-202ENST00000374487 MIFP14174 115 aa8.39□□□□□ -1.07
HMGCL-202ENST00000374487 FOXI1Q12951 378 aa8.39□□□□□ -1.07
HMGCL-202ENST00000374487 TEN1Q86WV5 123 aa8.39□□□□□ -1.07
HMGCL-202ENST00000374487 A0A1B0GUV1 79 aa8.39□□□□□ -1.07
HMGCL-202ENST00000374487 C21orf62-AS1Q17RA5 79 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms