RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 Q6ZQY7 126 aa7.48□□□□□ -1.21
CD28-202ENST00000374481 K7EMT4 169 aa7.48□□□□□ -1.21
CD28-202ENST00000374481 UBE2AP49459 152 aa7.48□□□□□ -1.21
CD28-202ENST00000374481 LINC00242Q5T6M2 205 aa7.48□□□□□ -1.21
CD28-202ENST00000374481 A0A087WZ39 114 aa7.48□□□□□ -1.21
CD28-202ENST00000374481 C5orf56Q8N8D9 126 aa7.48□□□□□ -1.21
CD28-202ENST00000374481 SMIM1B2RUZ4 78 aa7.48□□□□□ -1.21
CD28-202ENST00000374481 IGLV10-54A0A075B6I4 117 aa7.47□□□□□ -1.21
CD28-202ENST00000374481 LY6LH3BQJ8 138 aa7.47□□□□□ -1.21
CD28-202ENST00000374481 SEM1Q6ZVN7 128 aa7.47□□□□□ -1.21
CD28-202ENST00000374481 FAM218AQ96MZ4 157 aa7.47□□□□□ -1.21
CD28-202ENST00000374481 PLAC8L1A1L4L8 177 aa7.47□□□□□ -1.21
CD28-202ENST00000374481 NKAPP1Q8N9T2 125 aa7.47□□□□□ -1.21
CD28-202ENST00000374481 IL17DQ8TAD2 202 aa7.47□□□□□ -1.21
CD28-202ENST00000374481 A0A096LPF7 62 aa7.46□□□□□ -1.21
CD28-202ENST00000374481 BCE1O60756 84 aa7.46□□□□□ -1.21
CD28-202ENST00000374481 LINC00474Q9P2X8 69 aa7.46□□□□□ -1.21
CD28-202ENST00000374481 COX7BP24311 80 aa7.46□□□□□ -1.22
CD28-202ENST00000374481 LINC01547P58512 204 aaPredicted RBP7.46□□□□□ -1.22
CD28-202ENST00000374481 Q8N814 137 aa7.46□□□□□ -1.22
CD28-202ENST00000374481 FASNP49327 2511 aaKnown RBP7.46□□□□□ -1.22
CD28-202ENST00000374481 F8W735 103 aaPredicted RBP7.46□□□□□ -1.22
CD28-202ENST00000374481 C2orf48Q96LS8 159 aa7.46□□□□□ -1.22
CD28-202ENST00000374481 CELA1Q9UNI1 258 aa7.46□□□□□ -1.22
CD28-202ENST00000374481 NANOS2P60321 138 aaKnown RBP7.45□□□□□ -1.22
CD28-202ENST00000374481 Q6ZVQ6 151 aa7.45□□□□□ -1.22
CD28-202ENST00000374481 APRG1Q8IVJ8 170 aa7.45□□□□□ -1.22
CD28-202ENST00000374481 LINC00337Q8N6G1 96 aa7.45□□□□□ -1.22
CD28-202ENST00000374481 CMC4P56277 68 aaPredicted RBP7.45□□□□□ -1.22
CD28-202ENST00000374481 NDUFB1O75438 58 aa7.44□□□□□ -1.22
CD28-202ENST00000374481 COX6A2Q02221 97 aa7.44□□□□□ -1.22
CD28-202ENST00000374481 Q8N6K4 173 aa7.44□□□□□ -1.22
CD28-202ENST00000374481 COL4A2P08572 1712 aa7.44□□□□□ -1.22
CD28-202ENST00000374481 KIF25-AS1Q9Y6Z4 181 aa7.44□□□□□ -1.22
CD28-202ENST00000374481 TRBV6-4A0A1B0GX49 114 aa7.44□□□□□ -1.22
CD28-202ENST00000374481 MRGPRG-AS1Q2M3A8 158 aa7.44□□□□□ -1.22
CD28-202ENST00000374481 ODF3BA8MYP8 253 aa7.43□□□□□ -1.22
CD28-202ENST00000374481 C3orf84H3BNL1 204 aa7.43□□□□□ -1.22
CD28-202ENST00000374481 PLA2G2AP14555 144 aa7.43□□□□□ -1.22
CD28-202ENST00000374481 CCL19Q99731 98 aa7.43□□□□□ -1.22
CD28-202ENST00000374481 FAM30AQ9NZY2 134 aa7.43□□□□□ -1.22
CD28-202ENST00000374481 PLA2G2CQ5R387 149 aa7.43□□□□□ -1.22
CD28-202ENST00000374481 K7ENP7 123 aa7.42□□□□□ -1.22
CD28-202ENST00000374481 PRR15LQ9BU68 103 aa7.42□□□□□ -1.22
CD28-202ENST00000374481 OTOGLQ3ZCN5 2332 aa7.42□□□□□ -1.22
CD28-202ENST00000374481 LITAFQ99732 161 aa7.42□□□□□ -1.22
CD28-202ENST00000374481 CHCHD7Q9BUK0 85 aa7.41□□□□□ -1.22
CD28-202ENST00000374481 CD164Q04900 197 aa7.41□□□□□ -1.22
CD28-202ENST00000374481 K7EQG2 157 aa7.41□□□□□ -1.22
CD28-202ENST00000374481 LINC00315P59091 139 aa7.41□□□□□ -1.22
CD28-202ENST00000374481 MYO9AB2RTY4 2548 aa7.41□□□□□ -1.22
CD28-202ENST00000374481 SPAG11BQ08648 103 aa7.4□□□□□ -1.22
CD28-202ENST00000374481 Q6ZTI0 123 aa7.4□□□□□ -1.22
CD28-202ENST00000374481 PTPN13Q12923 2485 aa7.4□□□□□ -1.22
CD28-202ENST00000374481 Q5XG85 94 aa7.4□□□□□ -1.23
CD28-202ENST00000374481 H7BZZ5 65 aa7.39□□□□□ -1.23
CD28-202ENST00000374481 CDK2AP2O75956 126 aa7.39□□□□□ -1.23
CD28-202ENST00000374481 CDC42SE2Q9NRR3 84 aa7.39□□□□□ -1.23
CD28-202ENST00000374481 ZNF843Q8N446 348 aa7.39□□□□□ -1.23
CD28-202ENST00000374481 TRAV10A0A0B4J240 114 aa7.39□□□□□ -1.23
CD28-202ENST00000374481 GYPEP15421 78 aa7.39□□□□□ -1.23
CD28-202ENST00000374481 CXCL6P80162 114 aa7.39□□□□□ -1.23
CD28-202ENST00000374481 ZFP36P26651 326 aaKnown RBP7.39□□□□□ -1.23
CD28-202ENST00000374481 CFAP54Q96N23 3096 aa7.38□□□□□ -1.23
CD28-202ENST00000374481 LINC00269Q8N2A0 174 aa7.38□□□□□ -1.23
CD28-202ENST00000374481 IGFL3Q6UXB1 125 aa7.38□□□□□ -1.23
CD28-202ENST00000374481 NDUFS5O43920 106 aa7.38□□□□□ -1.23
CD28-202ENST00000374481 C5orf42Q9H799 3197 aa7.38□□□□□ -1.23
CD28-202ENST00000374481 COL6A3P12111 3177 aa7.38□□□□□ -1.23
CD28-202ENST00000374481 CHD7Q9P2D1 2997 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 EIF4EBP3O60516 100 aaPredicted RBP7.37□□□□□ -1.23
CD28-202ENST00000374481 KLKP1Q107X0 134 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 DEFB136Q30KP8 78 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 C1orf158Q8N1D5 194 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 B4DSR2 109 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 TM2D3Q9BRN9 247 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 IGFL2Q6UWQ7 119 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 LINC01600Q96MT4 127 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 CAMK2N2Q96S95 79 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 ETDCA0A1B0GVM5 59 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 PRM2P04554 102 aa7.37□□□□□ -1.23
CD28-202ENST00000374481 PRR3P79522 188 aaKnown RBP7.37□□□□□ -1.23
CD28-202ENST00000374481 ZNF462Q96JM2 2506 aa7.36□□□□□ -1.23
CD28-202ENST00000374481 HIGD2AQ9BW72 106 aa7.36□□□□□ -1.23
CD28-202ENST00000374481 SLURP1P55000 103 aa7.36□□□□□ -1.23
CD28-202ENST00000374481 C16orf74Q96GX8 76 aa7.35□□□□□ -1.23
CD28-202ENST00000374481 MSMBP08118 114 aa7.34□□□□□ -1.23
CD28-202ENST00000374481 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.34□□□□□ -1.23
CD28-202ENST00000374481 TMEM89A2RUT3 159 aa7.34□□□□□ -1.23
CD28-202ENST00000374481 Q8N9L7 120 aa7.34□□□□□ -1.23
CD28-202ENST00000374481 WDFY4Q6ZS81 3184 aa7.34□□□□□ -1.23
CD28-202ENST00000374481 MUC7Q8TAX7 377 aa7.33□□□□□ -1.24
CD28-202ENST00000374481 CYSTM1Q9H1C7 97 aa7.33□□□□□ -1.24
CD28-202ENST00000374481 XAGE1AQ9HD64 81 aa7.33□□□□□ -1.24
CD28-202ENST00000374481 WFDC10BQ8IUB3 73 aa7.33□□□□□ -1.24
CD28-202ENST00000374481 GRNP28799 593 aaKnown RBP7.33□□□□□ -1.24
CD28-202ENST00000374481 WFDC13Q8IUB5 93 aa7.33□□□□□ -1.24
CD28-202ENST00000374481 TRBV6-8A0A0A6YYG3 113 aa7.32□□□□□ -1.24
CD28-202ENST00000374481 ASPMQ8IZT6 3477 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms