RNA–Protein interactions for RNA: ENST00000373832.5

RCC1-202, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-202ENST00000373832 CHD6Q8TD26 2715 aa12.41□□□□□ -0.42
RCC1-202ENST00000373832 TRGV4A0A0C4DH28 118 aa12.4□□□□□ -0.42
RCC1-202ENST00000373832 PLAC8L1A1L4L8 177 aa12.4□□□□□ -0.42
RCC1-202ENST00000373832 NHLRC4P0CG21 123 aaPredicted RBP12.4□□□□□ -0.42
RCC1-202ENST00000373832 GAGE6Q13070 117 aa12.39□□□□□ -0.43
RCC1-202ENST00000373832 WNK1Q9H4A3 2382 aa12.39□□□□□ -0.43
RCC1-202ENST00000373832 AKAP9Q99996 3911 aa12.39□□□□□ -0.43
RCC1-202ENST00000373832 IGKV3OR2-268A0A0C4DH90 116 aa12.39□□□□□ -0.43
RCC1-202ENST00000373832 TRBV6-4A0A1B0GX49 114 aa12.39□□□□□ -0.43
RCC1-202ENST00000373832 COX7B2Q8TF08 81 aa12.39□□□□□ -0.43
RCC1-202ENST00000373832 ABCA12Q86UK0 2595 aa12.39□□□□□ -0.43
RCC1-202ENST00000373832 WFDC11Q8NEX6 87 aa12.38□□□□□ -0.43
RCC1-202ENST00000373832 TOMM7Q9P0U1 55 aa12.38□□□□□ -0.43
RCC1-202ENST00000373832 TRACP01848 142 aa12.37□□□□□ -0.43
RCC1-202ENST00000373832 PPDPFQ9H3Y8 114 aa12.37□□□□□ -0.43
RCC1-202ENST00000373832 UBR5O95071 2799 aaPredicted RBP12.36□□□□□ -0.43
RCC1-202ENST00000373832 TRAV13-2A0A0B4J235 113 aa12.36□□□□□ -0.43
RCC1-202ENST00000373832 PLA2G2AP14555 144 aa12.36□□□□□ -0.43
RCC1-202ENST00000373832 MIR7-3HGQ8N6C7 128 aa12.36□□□□□ -0.43
RCC1-202ENST00000373832 OVOL2Q9BRP0 275 aa12.36□□□□□ -0.43
RCC1-202ENST00000373832 BAALC-AS2P0C853 105 aa12.35□□□□□ -0.43
RCC1-202ENST00000373832 HIST2H2BCQ6DN03 193 aa12.35□□□□□ -0.43
RCC1-202ENST00000373832 CRPP02741 224 aa12.35□□□□□ -0.43
RCC1-202ENST00000373832 LINC01006Q8NI28 216 aa12.35□□□□□ -0.43
RCC1-202ENST00000373832 IGLV4-60A0A075B6I1 120 aa12.34□□□□□ -0.43
RCC1-202ENST00000373832 PF4P02776 101 aa12.34□□□□□ -0.43
RCC1-202ENST00000373832 ACYP1P07311 99 aa12.34□□□□□ -0.43
RCC1-202ENST00000373832 FAM218AQ96MZ4 157 aa12.34□□□□□ -0.43
RCC1-202ENST00000373832 CHCHD5Q9BSY4 110 aa12.34□□□□□ -0.43
RCC1-202ENST00000373832 ZFYVE26Q68DK2 2539 aa12.34□□□□□ -0.43
RCC1-202ENST00000373832 IGLV1-51P01701 117 aa12.33□□□□□ -0.43
RCC1-202ENST00000373832 CSNK1G2-AS1Q8NCQ2 148 aa12.33□□□□□ -0.43
RCC1-202ENST00000373832 EPG5Q9HCE0 2579 aa12.33□□□□□ -0.43
RCC1-202ENST00000373832 C19orf73Q9NVV2 129 aa12.33□□□□□ -0.43
RCC1-202ENST00000373832 TRBV6-8A0A0A6YYG3 113 aa12.33□□□□□ -0.44
RCC1-202ENST00000373832 FAM110AQ9BQ89 295 aa12.33□□□□□ -0.44
RCC1-202ENST00000373832 SND1-IT1Q9HBX3 110 aa12.33□□□□□ -0.44
RCC1-202ENST00000373832 LINC00158P58513 81 aa12.32□□□□□ -0.44
RCC1-202ENST00000373832 FHL2Q14192 279 aa12.32□□□□□ -0.44
RCC1-202ENST00000373832 FAM222AQ5U5X8 452 aa12.32□□□□□ -0.44
RCC1-202ENST00000373832 TLN2Q9Y4G6 2542 aa12.32□□□□□ -0.44
RCC1-202ENST00000373832 B5MCH6 92 aa12.32□□□□□ -0.44
RCC1-202ENST00000373832 RPL28P46779 137 aaKnown RBP12.31□□□□□ -0.44
RCC1-202ENST00000373832 ZNF469Q96JG9 3925 aaPredicted RBP12.31□□□□□ -0.44
RCC1-202ENST00000373832 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
RCC1-202ENST00000373832 SONP18583 2426 aaKnown RBP12.3□□□□□ -0.44
RCC1-202ENST00000373832 USP24Q9UPU5 2620 aa12.3□□□□□ -0.44
RCC1-202ENST00000373832 IGKV2-28A0A075B6P5 120 aa12.3□□□□□ -0.44
RCC1-202ENST00000373832 IGHV3OR16-9A0A0B4J2B5 98 aa12.3□□□□□ -0.44
RCC1-202ENST00000373832 IGKV2D-28P01615 120 aa12.3□□□□□ -0.44
RCC1-202ENST00000373832 C16orf95Q9H693 158 aa12.3□□□□□ -0.44
RCC1-202ENST00000373832 CCDC179H3BU77 68 aa12.29□□□□□ -0.44
RCC1-202ENST00000373832 SS18L2Q9UHA2 77 aa12.29□□□□□ -0.44
RCC1-202ENST00000373832 TRBV7-7A0A0K0K1E9 115 aa12.29□□□□□ -0.44
RCC1-202ENST00000373832 Q9HAA7 133 aa12.29□□□□□ -0.44
RCC1-202ENST00000373832 C5orf38Q86SI9 138 aa12.28□□□□□ -0.44
RCC1-202ENST00000373832 RNASE1P07998 156 aaKnown RBP12.28□□□□□ -0.44
RCC1-202ENST00000373832 ITPR3Q14573 2671 aa12.27□□□□□ -0.44
RCC1-202ENST00000373832 A0A087WZ39 114 aa12.27□□□□□ -0.44
RCC1-202ENST00000373832 C22orf24Q9Y442 160 aa12.27□□□□□ -0.44
RCC1-202ENST00000373832 NOTCH3Q9UM47 2321 aa12.27□□□□□ -0.45
RCC1-202ENST00000373832 IBA57-AS1B1ANH7 110 aa12.27□□□□□ -0.45
RCC1-202ENST00000373832 DEFB130BP0DP73 79 aa12.27□□□□□ -0.45
RCC1-202ENST00000373832 DEFB130AP0DP74 79 aa12.27□□□□□ -0.45
RCC1-202ENST00000373832 CCL18P55774 89 aa12.27□□□□□ -0.45
RCC1-202ENST00000373832 C2CD3Q4AC94 2353 aa12.26□□□□□ -0.45
RCC1-202ENST00000373832 MALP21145 153 aa12.26□□□□□ -0.45
RCC1-202ENST00000373832 PFN2P35080 140 aa12.26□□□□□ -0.45
RCC1-202ENST00000373832 SMIM11BQ8TCY0 68 aa12.26□□□□□ -0.45
RCC1-202ENST00000373832 APCP25054 2843 aa12.26□□□□□ -0.45
RCC1-202ENST00000373832 INAFM2P0DMQ5 153 aa12.25□□□□□ -0.45
RCC1-202ENST00000373832 LINC00959A0A1B0GUT2 108 aa12.25□□□□□ -0.45
RCC1-202ENST00000373832 DNAL4O96015 105 aa12.25□□□□□ -0.45
RCC1-202ENST00000373832 SMCR5Q8TEV8 140 aa12.25□□□□□ -0.45
RCC1-202ENST00000373832 SETXQ7Z333 2677 aaKnown RBP12.24□□□□□ -0.45
RCC1-202ENST00000373832 NF1P21359 2839 aa12.24□□□□□ -0.45
RCC1-202ENST00000373832 LINC00643Q86TS7 51 aa12.23□□□□□ -0.45
RCC1-202ENST00000373832 C11orf68Q9H3H3 251 aaKnown RBP12.23□□□□□ -0.45
RCC1-202ENST00000373832 A0A087WYN8 130 aa12.22□□□□□ -0.45
RCC1-202ENST00000373832 PAX4O43316 350 aa12.22□□□□□ -0.45
RCC1-202ENST00000373832 C6orf226Q5I0X4 101 aa12.22□□□□□ -0.45
RCC1-202ENST00000373832 IMUPQ9GZP8 106 aa12.22□□□□□ -0.45
RCC1-202ENST00000373832 GAGE2AQ6NT46 116 aa12.22□□□□□ -0.45
RCC1-202ENST00000373832 JMJD1CQ15652 2540 aa12.22□□□□□ -0.45
RCC1-202ENST00000373832 H0YGX0 51 aa12.21□□□□□ -0.45
RCC1-202ENST00000373832 GYPEP15421 78 aa12.21□□□□□ -0.45
RCC1-202ENST00000373832 KRTAP1-1Q07627 177 aa12.21□□□□□ -0.45
RCC1-202ENST00000373832 CUBNO60494 3623 aa12.21□□□□□ -0.45
RCC1-202ENST00000373832 OR13C6PQ8NH95 151 aa12.21□□□□□ -0.46
RCC1-202ENST00000373832 KIR2DL5BQ8NHK3 375 aa12.21□□□□□ -0.46
RCC1-202ENST00000373832 XCL1P47992 114 aa12.2□□□□□ -0.46
RCC1-202ENST00000373832 FAM236AA0A1B0GUQ0 79 aa12.19□□□□□ -0.46
RCC1-202ENST00000373832 FAM236BA0A1B0GV22 79 aa12.19□□□□□ -0.46
RCC1-202ENST00000373832 SS18Q15532 418 aa12.19□□□□□ -0.46
RCC1-202ENST00000373832 NIPBLQ6KC79 2804 aaeCLIP12.18□□□□□ -0.46
RCC1-202ENST00000373832 ATP5G1P05496 136 aa12.18□□□□□ -0.46
RCC1-202ENST00000373832 SDIM1Q6ZPB5 146 aa12.18□□□□□ -0.46
RCC1-202ENST00000373832 FLNAP21333 2647 aaKnown RBP12.18□□□□□ -0.46
RCC1-202ENST00000373832 CLPSL2Q6UWE3 100 aa12.17□□□□□ -0.46
RCC1-202ENST00000373832 CCDC168Q8NDH2 2452 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms