RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 UBE2D3P61077 147 aa10.35□□□□□ -0.75
LMX1B-202ENST00000373474 LINC00482Q8N8I6 264 aa10.34□□□□□ -0.75
LMX1B-202ENST00000373474 RPL28P46779 137 aaKnown RBP10.34□□□□□ -0.75
LMX1B-202ENST00000373474 Q8IZM0 81 aa10.34□□□□□ -0.75
LMX1B-202ENST00000373474 ABCA4P78363 2273 aa10.34□□□□□ -0.75
LMX1B-202ENST00000373474 CRIP2P52943 208 aaPredicted RBP10.33□□□□□ -0.76
LMX1B-202ENST00000373474 DEFB131BA0A096LNP1 70 aa10.33□□□□□ -0.76
LMX1B-202ENST00000373474 TRBV7-6A0A0J9YX20 115 aa10.33□□□□□ -0.76
LMX1B-202ENST00000373474 POM121L12Q8N7R1 296 aa10.33□□□□□ -0.76
LMX1B-202ENST00000373474 PRM2P04554 102 aa10.33□□□□□ -0.76
LMX1B-202ENST00000373474 IGKV2-28A0A075B6P5 120 aa10.32□□□□□ -0.76
LMX1B-202ENST00000373474 PSPHP1O15172 72 aa10.32□□□□□ -0.76
LMX1B-202ENST00000373474 IGKV2D-28P01615 120 aa10.32□□□□□ -0.76
LMX1B-202ENST00000373474 CDC42SE2Q9NRR3 84 aa10.32□□□□□ -0.76
LMX1B-202ENST00000373474 A0A087WVE0 104 aa10.32□□□□□ -0.76
LMX1B-202ENST00000373474 Q8N814 137 aa10.32□□□□□ -0.76
LMX1B-202ENST00000373474 CDSNQ15517 529 aa10.31□□□□□ -0.76
LMX1B-202ENST00000373474 MRGPRG-AS1Q2M3A8 158 aa10.31□□□□□ -0.76
LMX1B-202ENST00000373474 SPINK6Q6UWN8 80 aa10.31□□□□□ -0.76
LMX1B-202ENST00000373474 EDN2P20800 178 aa10.31□□□□□ -0.76
LMX1B-202ENST00000373474 C7orf33Q8WU49 177 aa10.3□□□□□ -0.76
LMX1B-202ENST00000373474 HILS1P60008 231 aa10.3□□□□□ -0.76
LMX1B-202ENST00000373474 IGHV4-30-4P0DP06 118 aa10.3□□□□□ -0.76
LMX1B-202ENST00000373474 Q8N3U1 123 aa10.3□□□□□ -0.76
LMX1B-202ENST00000373474 Q6ZVQ6 151 aa10.29□□□□□ -0.76
LMX1B-202ENST00000373474 TANC2Q9HCD6 1990 aa10.29□□□□□ -0.76
LMX1B-202ENST00000373474 A0A096LNJ9 63 aa10.29□□□□□ -0.76
LMX1B-202ENST00000373474 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.29□□□□□ -0.76
LMX1B-202ENST00000373474 LELP1Q5T871 98 aa10.29□□□□□ -0.76
LMX1B-202ENST00000373474 LINC01006Q8NI28 216 aa10.29□□□□□ -0.76
LMX1B-202ENST00000373474 CHCHD7Q9BUK0 85 aa10.29□□□□□ -0.76
LMX1B-202ENST00000373474 LIMD2Q9BT23 127 aa10.28□□□□□ -0.76
LMX1B-202ENST00000373474 EML5Q05BV3 1969 aa10.28□□□□□ -0.76
LMX1B-202ENST00000373474 INAFM1C9JVW0 142 aa10.28□□□□□ -0.76
LMX1B-202ENST00000373474 C10orf25Q5T742 122 aa10.28□□□□□ -0.76
LMX1B-202ENST00000373474 ESRGQ1W209 222 aa10.28□□□□□ -0.76
LMX1B-202ENST00000373474 ZNF843Q8N446 348 aa10.28□□□□□ -0.76
LMX1B-202ENST00000373474 TMEM254Q8TBM7 123 aa10.28□□□□□ -0.76
LMX1B-202ENST00000373474 SPTAN1Q13813 2472 aaKnown RBP10.28□□□□□ -0.76
LMX1B-202ENST00000373474 IGLV2-18A0A075B6J9 118 aa10.28□□□□□ -0.76
LMX1B-202ENST00000373474 TSPEAR-AS2P59090 65 aa10.28□□□□□ -0.76
LMX1B-202ENST00000373474 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
LMX1B-202ENST00000373474 LINC00242Q5T6M2 205 aa10.27□□□□□ -0.76
LMX1B-202ENST00000373474 hDV103S1A0JD37 113 aa10.27□□□□□ -0.77
LMX1B-202ENST00000373474 BRI3O95415 125 aa10.27□□□□□ -0.77
LMX1B-202ENST00000373474 CACNA1HO95180 2353 aa10.27□□□□□ -0.77
LMX1B-202ENST00000373474 CACNA1GO43497 2377 aa10.26□□□□□ -0.77
LMX1B-202ENST00000373474 EXPH5Q8NEV8 1989 aa10.26□□□□□ -0.77
LMX1B-202ENST00000373474 NANOS2P60321 138 aaKnown RBP10.26□□□□□ -0.77
LMX1B-202ENST00000373474 C1orf137Q5JT78 98 aa10.26□□□□□ -0.77
LMX1B-202ENST00000373474 RAI1Q7Z5J4 1906 aaPredicted RBP10.25□□□□□ -0.77
LMX1B-202ENST00000373474 AVPP01185 164 aa10.25□□□□□ -0.77
LMX1B-202ENST00000373474 SERTAD4-AS1Q5TG53 156 aa10.25□□□□□ -0.77
LMX1B-202ENST00000373474 TRBV10-3A0A0K0K1G6 114 aa10.25□□□□□ -0.77
LMX1B-202ENST00000373474 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.25□□□□□ -0.77
LMX1B-202ENST00000373474 SMIM1B2RUZ4 78 aa10.24□□□□□ -0.77
LMX1B-202ENST00000373474 RPS28P62857 69 aaKnown RBP10.24□□□□□ -0.77
LMX1B-202ENST00000373474 COX6A2Q02221 97 aa10.24□□□□□ -0.77
LMX1B-202ENST00000373474 AMELXQ99217 191 aa10.24□□□□□ -0.77
LMX1B-202ENST00000373474 DSCAMO60469 2012 aa10.23□□□□□ -0.77
LMX1B-202ENST00000373474 BEAN1Q3B7T3 259 aa10.23□□□□□ -0.77
LMX1B-202ENST00000373474 LINC00474Q9P2X8 69 aa10.23□□□□□ -0.77
LMX1B-202ENST00000373474 H0Y9P7 68 aa10.23□□□□□ -0.77
LMX1B-202ENST00000373474 CXCL6P80162 114 aa10.23□□□□□ -0.77
LMX1B-202ENST00000373474 DSCAML1Q8TD84 2053 aa10.23□□□□□ -0.77
LMX1B-202ENST00000373474 A0A087WYN8 130 aa10.22□□□□□ -0.77
LMX1B-202ENST00000373474 TNCP24821 2201 aa10.22□□□□□ -0.77
LMX1B-202ENST00000373474 TRAV10A0A0B4J240 114 aa10.22□□□□□ -0.77
LMX1B-202ENST00000373474 PLAC8L1A1L4L8 177 aa10.22□□□□□ -0.77
LMX1B-202ENST00000373474 LY6G6DO95868 133 aa10.22□□□□□ -0.77
LMX1B-202ENST00000373474 KPRPQ5T749 579 aaPredicted RBP10.22□□□□□ -0.77
LMX1B-202ENST00000373474 NOTCH3Q9UM47 2321 aa10.22□□□□□ -0.77
LMX1B-202ENST00000373474 BCE1O60756 84 aa10.22□□□□□ -0.77
LMX1B-202ENST00000373474 ODF3L2Q3SX64 289 aa10.22□□□□□ -0.77
LMX1B-202ENST00000373474 LINC01547P58512 204 aaPredicted RBP10.21□□□□□ -0.77
LMX1B-202ENST00000373474 ZNF580Q9UK33 172 aa10.21□□□□□ -0.77
LMX1B-202ENST00000373474 RPL37AP8A6NKH3 93 aa10.21□□□□□ -0.78
LMX1B-202ENST00000373474 IGLV9-49A0A0B4J1Y8 123 aa10.2□□□□□ -0.78
LMX1B-202ENST00000373474 LINC01546A6NGU7 62 aa10.2□□□□□ -0.78
LMX1B-202ENST00000373474 CRYGAP11844 174 aa10.2□□□□□ -0.78
LMX1B-202ENST00000373474 EGFEM1PQ0D2K5 195 aa10.2□□□□□ -0.78
LMX1B-202ENST00000373474 MED13LQ71F56 2210 aa10.2□□□□□ -0.78
LMX1B-202ENST00000373474 SHISA2Q6UWI4 295 aa10.2□□□□□ -0.78
LMX1B-202ENST00000373474 NBASA2RRP1 2371 aa10.2□□□□□ -0.78
LMX1B-202ENST00000373474 ADAMTSL4-AS1Q5T5F5 129 aa10.2□□□□□ -0.78
LMX1B-202ENST00000373474 ADAMTS20P59510 1910 aa10.19□□□□□ -0.78
LMX1B-202ENST00000373474 PLCE1Q9P212 2302 aa10.19□□□□□ -0.78
LMX1B-202ENST00000373474 CYSRT1A8MQ03 144 aa10.19□□□□□ -0.78
LMX1B-202ENST00000373474 CDIP1Q9H305 208 aa10.19□□□□□ -0.78
LMX1B-202ENST00000373474 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.18□□□□□ -0.78
LMX1B-202ENST00000373474 PCOTHQ58A44 107 aa10.17□□□□□ -0.78
LMX1B-202ENST00000373474 LINC00575Q6W349 94 aa10.17□□□□□ -0.78
LMX1B-202ENST00000373474 HCG22E2RYF7 251 aa10.17□□□□□ -0.78
LMX1B-202ENST00000373474 CREBBPQ92793 2442 aa10.16□□□□□ -0.78
LMX1B-202ENST00000373474 LINC00846Q9NV44 126 aa10.15□□□□□ -0.78
LMX1B-202ENST00000373474 ZFHX2Q9C0A1 2572 aaPredicted RBP10.15□□□□□ -0.78
LMX1B-202ENST00000373474 IGLV4-60A0A075B6I1 120 aa10.14□□□□□ -0.79
LMX1B-202ENST00000373474 F8WDY8 70 aa10.14□□□□□ -0.79
LMX1B-202ENST00000373474 Q6ZSN1 163 aa10.14□□□□□ -0.79
LMX1B-202ENST00000373474 FHL2Q14192 279 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms