RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 CFC1P0CG37 223 aa12.97□□□□□ -0.33
VEGFA-206ENST00000372077 FOXI1Q12951 378 aa12.97□□□□□ -0.33
VEGFA-206ENST00000372077 VCX2Q9H322 139 aa12.97□□□□□ -0.33
VEGFA-206ENST00000372077 A0A0J9YWU9 116 aa12.96□□□□□ -0.34
VEGFA-206ENST00000372077 TRBV27A0A0K0K1C4 114 aa12.96□□□□□ -0.34
VEGFA-206ENST00000372077 A4D1N5 150 aa12.96□□□□□ -0.34
VEGFA-206ENST00000372077 ZNF625Q96I27 306 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-206ENST00000372077 TRGV4A0A0C4DH28 118 aa12.95□□□□□ -0.34
VEGFA-206ENST00000372077 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
VEGFA-206ENST00000372077 TCL1BO95988 128 aa12.95□□□□□ -0.34
VEGFA-206ENST00000372077 Q1RN00 199 aa12.95□□□□□ -0.34
VEGFA-206ENST00000372077 SLC25A29Q8N8R3 303 aa12.95□□□□□ -0.34
VEGFA-206ENST00000372077 K7EQD1 137 aa12.94□□□□□ -0.34
VEGFA-206ENST00000372077 DNAJC30Q96LL9 226 aa12.94□□□□□ -0.34
VEGFA-206ENST00000372077 EIF4EBP3O60516 100 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-206ENST00000372077 HUWE1Q7Z6Z7 4374 aaKnown RBP12.94□□□□□ -0.34
VEGFA-206ENST00000372077 IGLV4-3A0A075B6K6 122 aa12.94□□□□□ -0.34
VEGFA-206ENST00000372077 TRBV10-1A0A0K0K1A3 114 aa12.94□□□□□ -0.34
VEGFA-206ENST00000372077 NHLRC4P0CG21 123 aaPredicted RBP12.94□□□□□ -0.34
VEGFA-206ENST00000372077 MUSTN1Q8IVN3 82 aa12.94□□□□□ -0.34
VEGFA-206ENST00000372077 ZNF22P17026 224 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-206ENST00000372077 ZFAND6Q6FIF0 208 aa12.93□□□□□ -0.34
VEGFA-206ENST00000372077 C20orf203Q8NBC4 194 aa12.93□□□□□ -0.34
VEGFA-206ENST00000372077 IGHV3-30P01768 117 aa12.93□□□□□ -0.34
VEGFA-206ENST00000372077 ATP5G1P05496 136 aa12.93□□□□□ -0.34
VEGFA-206ENST00000372077 IGHV3-30-5P0DP03 117 aa12.93□□□□□ -0.34
VEGFA-206ENST00000372077 I3L3M4 83 aa12.92□□□□□ -0.34
VEGFA-206ENST00000372077 CARD19Q96LW7 228 aa12.92□□□□□ -0.34
VEGFA-206ENST00000372077 AMELXQ99217 191 aa12.92□□□□□ -0.34
VEGFA-206ENST00000372077 GAGE12JA6NER3 117 aa12.91□□□□□ -0.34
VEGFA-206ENST00000372077 GAGE4Q13068 117 aa12.91□□□□□ -0.34
VEGFA-206ENST00000372077 C10orf126Q8N4M7 172 aa12.91□□□□□ -0.34
VEGFA-206ENST00000372077 DNAH9Q9NYC9 4486 aa12.91□□□□□ -0.34
VEGFA-206ENST00000372077 CCDC179H3BU77 68 aa12.91□□□□□ -0.34
VEGFA-206ENST00000372077 UBE2D1P51668 147 aa12.91□□□□□ -0.34
VEGFA-206ENST00000372077 RHOHQ15669 191 aa12.9□□□□□ -0.34
VEGFA-206ENST00000372077 TIMM17AQ99595 171 aa12.9□□□□□ -0.34
VEGFA-206ENST00000372077 M0QXV9 152 aa12.9□□□□□ -0.34
VEGFA-206ENST00000372077 TMEM141Q96I45 108 aa12.9□□□□□ -0.34
VEGFA-206ENST00000372077 PRO0255Q9UI72 69 aa12.9□□□□□ -0.34
VEGFA-206ENST00000372077 TENM3Q9P273 2699 aa12.9□□□□□ -0.34
VEGFA-206ENST00000372077 C11orf45Q8TAV5 145 aa12.89□□□□□ -0.35
VEGFA-206ENST00000372077 PPDPFQ9H3Y8 114 aa12.89□□□□□ -0.35
VEGFA-206ENST00000372077 TMEM223A0PJW6 202 aa12.88□□□□□ -0.35
VEGFA-206ENST00000372077 RPL36AP83881 106 aaKnown RBP12.88□□□□□ -0.35
VEGFA-206ENST00000372077 RPL36ALQ969Q0 106 aaKnown RBP12.88□□□□□ -0.35
VEGFA-206ENST00000372077 IGHV3-30-3P0DP02 117 aa12.88□□□□□ -0.35
VEGFA-206ENST00000372077 ADAMTSL4-AS1Q5T5F5 129 aa12.88□□□□□ -0.35
VEGFA-206ENST00000372077 TRBV20-1A0A075B6N2 111 aa12.87□□□□□ -0.35
VEGFA-206ENST00000372077 LOC100131303A0A0U1RQF7 123 aa12.87□□□□□ -0.35
VEGFA-206ENST00000372077 FAM104AQ969W3 186 aa12.87□□□□□ -0.35
VEGFA-206ENST00000372077 IGKV3OR2-268A0A0C4DH90 116 aa12.86□□□□□ -0.35
VEGFA-206ENST00000372077 UBE2D3P61077 147 aa12.86□□□□□ -0.35
VEGFA-206ENST00000372077 UBE2D2P62837 147 aa12.86□□□□□ -0.35
VEGFA-206ENST00000372077 Q6ZTC4 211 aa12.86□□□□□ -0.35
VEGFA-206ENST00000372077 C9JAW5 83 aa12.86□□□□□ -0.35
VEGFA-206ENST00000372077 F5H768 121 aa12.86□□□□□ -0.35
VEGFA-206ENST00000372077 LINC00694P0DN24 101 aa12.86□□□□□ -0.35
VEGFA-206ENST00000372077 NANOS2P60321 138 aaKnown RBP12.86□□□□□ -0.35
VEGFA-206ENST00000372077 PRO1854Q9UHT4 67 aa12.86□□□□□ -0.35
VEGFA-206ENST00000372077 VSIG2Q96IQ7 327 aa12.85□□□□□ -0.35
VEGFA-206ENST00000372077 TIMM21Q9BVV7 248 aa12.85□□□□□ -0.35
VEGFA-206ENST00000372077 PAX4O43316 350 aa12.84□□□□□ -0.35
VEGFA-206ENST00000372077 HTN3P15516 51 aa12.84□□□□□ -0.35
VEGFA-206ENST00000372077 ANKRD29Q8N6D5 301 aa12.84□□□□□ -0.35
VEGFA-206ENST00000372077 A0A0J9YXY3 114 aa12.84□□□□□ -0.35
VEGFA-206ENST00000372077 PAPPA-AS1Q5QFB9 102 aa12.84□□□□□ -0.35
VEGFA-206ENST00000372077 GYPEP15421 78 aa12.83□□□□□ -0.36
VEGFA-206ENST00000372077 DAZ4Q86SG3 579 aaKnown RBP12.83□□□□□ -0.36
VEGFA-206ENST00000372077 DAZ3Q9NR90 486 aaKnown RBP12.83□□□□□ -0.36
VEGFA-206ENST00000372077 LEPROTO15243 131 aa12.82□□□□□ -0.36
VEGFA-206ENST00000372077 NDUFV3P56181 108 aaKnown RBP12.82□□□□□ -0.36
VEGFA-206ENST00000372077 ATP6V0E2Q8NHE4 81 aa12.82□□□□□ -0.36
VEGFA-206ENST00000372077 TRAV13-1A0A0B4J241 112 aa12.82□□□□□ -0.36
VEGFA-206ENST00000372077 TEN1Q86WV5 123 aa12.81□□□□□ -0.36
VEGFA-206ENST00000372077 CDKN2A-AS1Q9UH64 79 aa12.81□□□□□ -0.36
VEGFA-206ENST00000372077 NDUFA12Q9UI09 145 aa12.81□□□□□ -0.36
VEGFA-206ENST00000372077 DGAT2L7PQ6IED9 249 aa12.8□□□□□ -0.36
VEGFA-206ENST00000372077 MEGF8Q7Z7M0 2845 aa12.8□□□□□ -0.36
VEGFA-206ENST00000372077 COX6A2Q02221 97 aa12.8□□□□□ -0.36
VEGFA-206ENST00000372077 PPDPFLQ8WWR9 84 aa12.8□□□□□ -0.36
VEGFA-206ENST00000372077 CHCHD7Q9BUK0 85 aa12.8□□□□□ -0.36
VEGFA-206ENST00000372077 H3BNG1 76 aa12.79□□□□□ -0.36
VEGFA-206ENST00000372077 CLEC2BQ92478 149 aa12.79□□□□□ -0.36
VEGFA-206ENST00000372077 DEFB131BA0A096LNP1 70 aa12.79□□□□□ -0.36
VEGFA-206ENST00000372077 IGHV3-33P01772 117 aa12.78□□□□□ -0.36
VEGFA-206ENST00000372077 GAGE2BQ13066 116 aa12.78□□□□□ -0.36
VEGFA-206ENST00000372077 GAGE2EQ4V326 116 aa12.78□□□□□ -0.36
VEGFA-206ENST00000372077 TTC32Q5I0X7 151 aa12.78□□□□□ -0.36
VEGFA-206ENST00000372077 GAGE2DQ9UEU5 116 aa12.78□□□□□ -0.36
VEGFA-206ENST00000372077 C5orf47Q569G3 176 aa12.78□□□□□ -0.36
VEGFA-206ENST00000372077 PRKDCP78527 4128 aaKnown RBP12.77□□□□□ -0.36
VEGFA-206ENST00000372077 TRAV10A0A0B4J240 114 aa12.77□□□□□ -0.36
VEGFA-206ENST00000372077 NTM-AS1Q6ZSK4 140 aa12.77□□□□□ -0.37
VEGFA-206ENST00000372077 UBE2D4Q9Y2X8 147 aa12.77□□□□□ -0.37
VEGFA-206ENST00000372077 SLC25A20O43772 301 aa12.76□□□□□ -0.37
VEGFA-206ENST00000372077 MRPL23Q16540 153 aaKnown RBP12.76□□□□□ -0.37
VEGFA-206ENST00000372077 TRIAP1O43715 76 aa12.75□□□□□ -0.37
VEGFA-206ENST00000372077 CSDC2Q9Y534 153 aaKnown RBP12.75□□□□□ -0.37
VEGFA-206ENST00000372077 ICOSQ9Y6W8 199 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms