RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 SLC25A29Q8N8R3 303 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 DIDO1Q9BTC0 2240 aaKnown RBP2.64□□□□□ -1.99
MCF2-203ENST00000370576 TRAV12-1A0A0B4J245 112 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 LGALS3P17931 250 aaKnown RBP2.64□□□□□ -1.99
MCF2-203ENST00000370576 LYZP61626 148 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 DEFA5Q01523 94 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 PSMG4Q5JS54 123 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 LINC01545Q5VT33 79 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 TMEM256Q8N2U0 113 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 DSCR8Q96T75 97 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 RHPN1-AS1Q9BWJ2 59 aa2.64□□□□□ -1.99
MCF2-203ENST00000370576 HIVEP1P15822 2718 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 FBN1P35555 2871 aaKnown RBP2.63□□□□□ -1.99
MCF2-203ENST00000370576 IGHV3-30-3P0DP02 117 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 PLGLAQ15195 96 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 TIMM21Q9BVV7 248 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 OCR1Q9BZK8 76 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 ITPR3Q14573 2671 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 PKD1P98161 4303 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 NBASA2RRP1 2371 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 A8MWV9 139 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 ZNF705GA8MUZ8 300 aaPredicted RBP2.63□□□□□ -1.99
MCF2-203ENST00000370576 HIGD1CA8MV81 97 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 IGHV3-23P01764 117 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 PRSS2P07478 247 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 LYPD5Q6UWN5 251 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 MPLKIPQ8TAP9 179 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 SVILO95425 2214 aa2.63□□□□□ -1.99
MCF2-203ENST00000370576 SPTAN1Q13813 2472 aaKnown RBP2.63□□□□□ -1.99
MCF2-203ENST00000370576 A0A1B0GUT8 65 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 A0A1B0GW54 56 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 TRAV21A0A0B4J279 112 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 RPL37AP8A6NKH3 93 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 H3BNG1 76 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 ASIPP42127 132 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 ADIRFQ15847 76 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 ASB16-AS1Q495Z4 193 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 CNTRLQ7Z7A1 2325 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 M0R3E3 92 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 CD28P10747 220 aa2.62□□□□□ -1.99
MCF2-203ENST00000370576 MRPL51Q4U2R6 128 aaKnown RBP2.62□□□□□ -1.99
MCF2-203ENST00000370576 CSMD3Q7Z407 3707 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 IGKV2-40A0A087WW87 121 aaPredicted RBP2.61□□□□□ -1.99
MCF2-203ENST00000370576 A0A1W2PPM0 123 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 GRIFINA4D1Z8 144 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 IGIPA6NJ69 53 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 H7C423 109 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 IGKV2D-40P01614 121 aaPredicted RBP2.61□□□□□ -1.99
MCF2-203ENST00000370576 HBDP02042 147 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 CD7P09564 240 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 ARMS2P0C7Q2 107 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 CXCL5P42830 114 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 HERVK_113P61574 105 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 C9orf153Q5TBE3 101 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 AMELXQ99217 191 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 MRPS36P82909 103 aaKnown RBP2.61□□□□□ -1.99
MCF2-203ENST00000370576 Q6ZQT7 251 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 DNAH11Q96DT5 4516 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 IGHV1-24A0A0C4DH33 117 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 SYS1-DBNDD2H3BUS1 97 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 M0QY20 66 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 PRSS1P07477 247 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 LYZL1Q6UWQ5 148 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 NTM-AS1Q6ZSK4 140 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 PRSS3P2Q8NHM4 247 aa2.61□□□□□ -1.99
MCF2-203ENST00000370576 PLXNB1O43157 2135 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 RP1L1Q8IWN7 2480 aaPredicted RBP2.6□□□□□ -1.99
MCF2-203ENST00000370576 PPP1R17O96001 155 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 APCSP02743 223 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 ST20Q9HBF5 79 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 TRAPPC1Q9Y5R8 145 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 LOC107984156A0A0G2JMH3 177 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 K7ERJ3 54 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 GNRH2O43555 120 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 PRM2P04554 102 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 UBE2G1P62253 170 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 RHOHQ15669 191 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 Q1T7F1 81 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 RNASE13Q5GAN3 156 aaKnown RBP2.6□□□□□ -1.99
MCF2-203ENST00000370576 ARL17AQ8IVW1 177 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 TIMM17AQ99595 171 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 CHCHD5Q9BSY4 110 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 CREBBPQ92793 2442 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 IGHV3-74A0A0B4J1X5 117 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 CSN1S1P47710 185 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 ZNF876PQ49A33 203 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 KRTAP3-1Q9BYR8 98 aa2.6□□□□□ -1.99
MCF2-203ENST00000370576 MED13LQ71F56 2210 aa2.59□□□□□ -1.99
MCF2-203ENST00000370576 COL12A1Q99715 3063 aa2.59□□□□□ -1.99
MCF2-203ENST00000370576 PKDREJQ9NTG1 2253 aa2.59□□□□□ -1.99
MCF2-203ENST00000370576 IGHV3-53P01767 116 aa2.59□□□□□ -1.99
MCF2-203ENST00000370576 LYRM7Q5U5X0 104 aa2.59□□□□□ -1.99
MCF2-203ENST00000370576 C5orf38Q86SI9 138 aa2.59□□□□□ -1.99
MCF2-203ENST00000370576 PRELID3AQ96N28 172 aa2.59□□□□□ -1.99
MCF2-203ENST00000370576 C8orf17Q9NRJ1 99 aa2.59□□□□□ -1.99
MCF2-203ENST00000370576 PCNX1Q96RV3 2341 aa2.59□□□□□ -1.99
MCF2-203ENST00000370576 IGHV3-21A0A0B4J1V1 117 aa2.59□□□□□ -2
MCF2-203ENST00000370576 A0A1B0GVX0 72 aa2.59□□□□□ -2
MCF2-203ENST00000370576 KRTAP16-1A8MUX0 517 aa2.59□□□□□ -2
MCF2-203ENST00000370576 SERF1AO75920 110 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms