RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 DNAJC30Q96LL9 226 aa7.22□□□□□ -1.25
PRPF38B-203ENST00000370025 DSCR8Q96T75 97 aa7.22□□□□□ -1.25
PRPF38B-203ENST00000370025 CYSTM1Q9H1C7 97 aa7.22□□□□□ -1.25
PRPF38B-203ENST00000370025 C11orf68Q9H3H3 251 aaKnown RBP7.22□□□□□ -1.25
PRPF38B-203ENST00000370025 A0A0B4J2C4 111 aa7.21□□□□□ -1.25
PRPF38B-203ENST00000370025 BEAN1Q3B7T3 259 aa7.21□□□□□ -1.25
PRPF38B-203ENST00000370025 LINC00482Q8N8I6 264 aa7.21□□□□□ -1.25
PRPF38B-203ENST00000370025 TMEM223A0PJW6 202 aa7.21□□□□□ -1.26
PRPF38B-203ENST00000370025 IGHV3-30-3P0DP02 117 aa7.21□□□□□ -1.26
PRPF38B-203ENST00000370025 TIMM21Q9BVV7 248 aa7.21□□□□□ -1.26
PRPF38B-203ENST00000370025 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.21□□□□□ -1.26
PRPF38B-203ENST00000370025 IGKV2-29A2NJV5 120 aaPredicted RBP7.21□□□□□ -1.26
PRPF38B-203ENST00000370025 VCYO14598 125 aa7.21□□□□□ -1.26
PRPF38B-203ENST00000370025 SDIM1Q6ZPB5 146 aa7.21□□□□□ -1.26
PRPF38B-203ENST00000370025 IGKV3D-7A0A0C4DH55 119 aa7.2□□□□□ -1.26
PRPF38B-203ENST00000370025 J3KT08 172 aa7.2□□□□□ -1.26
PRPF38B-203ENST00000370025 NSD1Q96L73 2696 aaPredicted RBP7.2□□□□□ -1.26
PRPF38B-203ENST00000370025 LEPROTO15243 131 aa7.2□□□□□ -1.26
PRPF38B-203ENST00000370025 PIK3CD-AS1Q5SR53 167 aa7.2□□□□□ -1.26
PRPF38B-203ENST00000370025 NDUFA12Q9UI09 145 aa7.2□□□□□ -1.26
PRPF38B-203ENST00000370025 HIVEP1P15822 2718 aa7.2□□□□□ -1.26
PRPF38B-203ENST00000370025 TRBV30A0A0K0K1B3 111 aa7.2□□□□□ -1.26
PRPF38B-203ENST00000370025 HRCT1Q6UXD1 115 aa7.2□□□□□ -1.26
PRPF38B-203ENST00000370025 C4orf26Q17RF5 130 aa7.19□□□□□ -1.26
PRPF38B-203ENST00000370025 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.19□□□□□ -1.26
PRPF38B-203ENST00000370025 Q9HAA7 133 aa7.19□□□□□ -1.26
PRPF38B-203ENST00000370025 A0A087WVE0 104 aa7.19□□□□□ -1.26
PRPF38B-203ENST00000370025 C1orf158Q8N1D5 194 aa7.19□□□□□ -1.26
PRPF38B-203ENST00000370025 TRBV6-5A0A0K0K1A5 114 aa7.18□□□□□ -1.26
PRPF38B-203ENST00000370025 M0QY20 66 aa7.18□□□□□ -1.26
PRPF38B-203ENST00000370025 UQCRQO14949 82 aa7.18□□□□□ -1.26
PRPF38B-203ENST00000370025 C19orf73Q9NVV2 129 aa7.18□□□□□ -1.26
PRPF38B-203ENST00000370025 RPL35AP18077 110 aaKnown RBP7.18□□□□□ -1.26
PRPF38B-203ENST00000370025 POLR2KP53803 58 aaKnown RBP7.18□□□□□ -1.26
PRPF38B-203ENST00000370025 DAZ2Q13117 558 aaKnown RBP7.18□□□□□ -1.26
PRPF38B-203ENST00000370025 DAZ4Q86SG3 579 aaKnown RBP7.18□□□□□ -1.26
PRPF38B-203ENST00000370025 C11orf72Q8NBR9 251 aa7.18□□□□□ -1.26
PRPF38B-203ENST00000370025 DAZ3Q9NR90 486 aaKnown RBP7.18□□□□□ -1.26
PRPF38B-203ENST00000370025 H3BT86 120 aa7.17□□□□□ -1.26
PRPF38B-203ENST00000370025 C9orf66Q5T8R8 295 aa7.17□□□□□ -1.26
PRPF38B-203ENST00000370025 TMEM141Q96I45 108 aa7.17□□□□□ -1.26
PRPF38B-203ENST00000370025 WFDC10AQ9H1F0 79 aa7.17□□□□□ -1.26
PRPF38B-203ENST00000370025 LST1O00453 97 aa7.17□□□□□ -1.26
PRPF38B-203ENST00000370025 TRGV1A0A0A0MS02 117 aa7.16□□□□□ -1.26
PRPF38B-203ENST00000370025 TRBV7-7A0A0K0K1E9 115 aa7.16□□□□□ -1.26
PRPF38B-203ENST00000370025 OR13C6PQ8NH95 151 aa7.16□□□□□ -1.26
PRPF38B-203ENST00000370025 TIMM17AQ99595 171 aa7.16□□□□□ -1.26
PRPF38B-203ENST00000370025 TRBV27A0A0K0K1C4 114 aa7.16□□□□□ -1.26
PRPF38B-203ENST00000370025 A0A1B0GX51 115 aa7.16□□□□□ -1.26
PRPF38B-203ENST00000370025 TRACP01848 142 aa7.15□□□□□ -1.27
PRPF38B-203ENST00000370025 BAALC-AS2P0C853 105 aa7.15□□□□□ -1.27
PRPF38B-203ENST00000370025 LINC00526Q96FQ7 95 aa7.15□□□□□ -1.27
PRPF38B-203ENST00000370025 GIG44P09565 113 aaPredicted RBP7.14□□□□□ -1.27
PRPF38B-203ENST00000370025 F8P00451 2351 aa7.14□□□□□ -1.27
PRPF38B-203ENST00000370025 NIPBLQ6KC79 2804 aaeCLIP7.14□□□□□ -1.27
PRPF38B-203ENST00000370025 IGLV4-3A0A075B6K6 122 aa7.14□□□□□ -1.27
PRPF38B-203ENST00000370025 Q9UF83 564 aa7.14□□□□□ -1.27
PRPF38B-203ENST00000370025 COX7CP15954 63 aa7.14□□□□□ -1.27
PRPF38B-203ENST00000370025 HIST1H4AP62805 103 aaKnown RBP7.14□□□□□ -1.27
PRPF38B-203ENST00000370025 SPANXA1Q9NS26 97 aa7.14□□□□□ -1.27
PRPF38B-203ENST00000370025 FLNBO75369 2602 aaKnown RBP7.13□□□□□ -1.27
PRPF38B-203ENST00000370025 LINC00643Q86TS7 51 aa7.13□□□□□ -1.27
PRPF38B-203ENST00000370025 F5H768 121 aa7.13□□□□□ -1.27
PRPF38B-203ENST00000370025 TIRAPP58753 221 aa7.13□□□□□ -1.27
PRPF38B-203ENST00000370025 C16orf74Q96GX8 76 aa7.13□□□□□ -1.27
PRPF38B-203ENST00000370025 LITAFQ99732 161 aa7.13□□□□□ -1.27
PRPF38B-203ENST00000370025 TRGV2A0A075B6R0 118 aa7.12□□□□□ -1.27
PRPF38B-203ENST00000370025 A0A096LPF7 62 aa7.12□□□□□ -1.27
PRPF38B-203ENST00000370025 IL17DQ8TAD2 202 aa7.12□□□□□ -1.27
PRPF38B-203ENST00000370025 FAM240AA0A1B0GVK7 77 aa7.12□□□□□ -1.27
PRPF38B-203ENST00000370025 CIRBPQ14011 172 aaKnown RBP7.12□□□□□ -1.27
PRPF38B-203ENST00000370025 MIAQ16674 131 aa7.12□□□□□ -1.27
PRPF38B-203ENST00000370025 C20orf203Q8NBC4 194 aa7.12□□□□□ -1.27
PRPF38B-203ENST00000370025 CSNK1G2-AS1Q8NCQ2 148 aa7.12□□□□□ -1.27
PRPF38B-203ENST00000370025 WFDC9Q8NEX5 89 aa7.12□□□□□ -1.27
PRPF38B-203ENST00000370025 TINCRA0A1B0GVN0 87 aa7.11□□□□□ -1.27
PRPF38B-203ENST00000370025 C14orf132Q9NPU4 83 aa7.11□□□□□ -1.27
PRPF38B-203ENST00000370025 CLPSL2Q6UWE3 100 aa7.11□□□□□ -1.27
PRPF38B-203ENST00000370025 NOP10Q9NPE3 64 aaKnown RBP7.11□□□□□ -1.27
PRPF38B-203ENST00000370025 UBE2L6O14933 153 aa7.11□□□□□ -1.27
PRPF38B-203ENST00000370025 OXTP01178 125 aa7.11□□□□□ -1.27
PRPF38B-203ENST00000370025 SPATA3Q8NHX4 192 aa7.11□□□□□ -1.27
PRPF38B-203ENST00000370025 Q6ZSN1 163 aa7.1□□□□□ -1.27
PRPF38B-203ENST00000370025 Q6ZTI0 123 aa7.1□□□□□ -1.27
PRPF38B-203ENST00000370025 DNAL4O96015 105 aa7.1□□□□□ -1.27
PRPF38B-203ENST00000370025 Q9H8V8 135 aa7.1□□□□□ -1.27
PRPF38B-203ENST00000370025 CDKN2A-AS1Q9UH64 79 aa7.1□□□□□ -1.27
PRPF38B-203ENST00000370025 IGHV1-58A0A0C4DH39 117 aa7.09□□□□□ -1.27
PRPF38B-203ENST00000370025 FAM218AQ96MZ4 157 aa7.09□□□□□ -1.27
PRPF38B-203ENST00000370025 C9orf129Q5T035 196 aaKnown RBP7.09□□□□□ -1.27
PRPF38B-203ENST00000370025 PRIMA1Q86XR5 153 aa7.09□□□□□ -1.27
PRPF38B-203ENST00000370025 DPH3Q96FX2 82 aa7.09□□□□□ -1.27
PRPF38B-203ENST00000370025 ATP5G1P05496 136 aa7.08□□□□□ -1.28
PRPF38B-203ENST00000370025 DEFB130BP0DP73 79 aa7.08□□□□□ -1.28
PRPF38B-203ENST00000370025 DEFB130AP0DP74 79 aa7.08□□□□□ -1.28
PRPF38B-203ENST00000370025 PFN2P35080 140 aa7.08□□□□□ -1.28
PRPF38B-203ENST00000370025 OVOL2Q9BRP0 275 aa7.08□□□□□ -1.28
PRPF38B-203ENST00000370025 ATRQ13535 2644 aa7.08□□□□□ -1.28
PRPF38B-203ENST00000370025 VSIG2Q96IQ7 327 aa7.08□□□□□ -1.28
PRPF38B-203ENST00000370025 IMUPQ9GZP8 106 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms