RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 Q8N9L7 120 aa6.43□□□□□ -1.38
LCA5-201ENST00000369846 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
LCA5-201ENST00000369846 EXPH5Q8NEV8 1989 aa6.43□□□□□ -1.38
LCA5-201ENST00000369846 DCANP1Q8TF63 244 aa6.43□□□□□ -1.38
LCA5-201ENST00000369846 LHBP01229 141 aa6.43□□□□□ -1.38
LCA5-201ENST00000369846 LAMA5O15230 3695 aa6.43□□□□□ -1.38
LCA5-201ENST00000369846 FAM19A1Q7Z5A9 133 aa6.42□□□□□ -1.38
LCA5-201ENST00000369846 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
LCA5-201ENST00000369846 XAGE1AQ9HD64 81 aa6.42□□□□□ -1.38
LCA5-201ENST00000369846 SETXQ7Z333 2677 aaKnown RBP6.42□□□□□ -1.38
LCA5-201ENST00000369846 ATMQ13315 3056 aa6.42□□□□□ -1.38
LCA5-201ENST00000369846 Q8N3U1 123 aa6.42□□□□□ -1.38
LCA5-201ENST00000369846 HIGD2AQ9BW72 106 aa6.42□□□□□ -1.38
LCA5-201ENST00000369846 ACANP16112 2415 aa6.42□□□□□ -1.38
LCA5-201ENST00000369846 USP9XQ93008 2570 aaPredicted RBP6.42□□□□□ -1.38
LCA5-201ENST00000369846 MSMBP08118 114 aa6.42□□□□□ -1.38
LCA5-201ENST00000369846 C9orf85Q96MD7 179 aa6.41□□□□□ -1.38
LCA5-201ENST00000369846 CSMD1Q96PZ7 3565 aa6.41□□□□□ -1.38
LCA5-201ENST00000369846 KALRNO60229 2985 aa6.41□□□□□ -1.38
LCA5-201ENST00000369846 UNQ9165/PRO28630Q6UXU0 137 aa6.41□□□□□ -1.38
LCA5-201ENST00000369846 LINC00269Q8N2A0 174 aa6.41□□□□□ -1.38
LCA5-201ENST00000369846 IBA57-AS1B1ANH7 110 aa6.41□□□□□ -1.38
LCA5-201ENST00000369846 NRACQ8N912 160 aa6.41□□□□□ -1.38
LCA5-201ENST00000369846 PRYO14603 147 aa6.4□□□□□ -1.38
LCA5-201ENST00000369846 BEAN1Q3B7T3 259 aa6.4□□□□□ -1.38
LCA5-201ENST00000369846 LINC00208Q96KT6 92 aa6.4□□□□□ -1.38
LCA5-201ENST00000369846 ZFAND2AQ8N6M9 145 aa6.4□□□□□ -1.39
LCA5-201ENST00000369846 SLURP1P55000 103 aa6.4□□□□□ -1.39
LCA5-201ENST00000369846 HILS1P60008 231 aa6.4□□□□□ -1.39
LCA5-201ENST00000369846 ESRGQ1W209 222 aa6.4□□□□□ -1.39
LCA5-201ENST00000369846 NTM-AS1Q6ZSK4 140 aa6.4□□□□□ -1.39
LCA5-201ENST00000369846 PRORYQ9H606 182 aa6.4□□□□□ -1.39
LCA5-201ENST00000369846 IGHV4-30-4P0DP06 118 aa6.39□□□□□ -1.39
LCA5-201ENST00000369846 IGHV4-31P0DP07 118 aa6.39□□□□□ -1.39
LCA5-201ENST00000369846 Q8N9W7 124 aa6.39□□□□□ -1.39
LCA5-201ENST00000369846 FAM222AQ5U5X8 452 aa6.39□□□□□ -1.39
LCA5-201ENST00000369846 TRBV7-7A0A0K0K1E9 115 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 IGLV2-11P01706 119 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 IGHV4-38-2P0DP08 117 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 WFDC10AQ9H1F0 79 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 PIEZO2Q9H5I5 2752 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 A0A087WZ39 114 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 M0QY20 66 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
LCA5-201ENST00000369846 TMEM254Q8TBM7 123 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 ODF3Q96PU9 254 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 TACC2O95359 2948 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 A0A0J9YX75 114 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 DNAJC9-AS1A6NH13 148 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 H3BUA1 57 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 VPREB1P12018 145 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 LINC00846Q9NV44 126 aa6.38□□□□□ -1.39
LCA5-201ENST00000369846 IGLV1-47P01700 117 aa6.37□□□□□ -1.39
LCA5-201ENST00000369846 PROK1P58294 105 aa6.37□□□□□ -1.39
LCA5-201ENST00000369846 ZMAT4Q9H898 229 aa6.37□□□□□ -1.39
LCA5-201ENST00000369846 CRYGAP11844 174 aa6.37□□□□□ -1.39
LCA5-201ENST00000369846 KRTAP27-1Q3LI81 207 aa6.37□□□□□ -1.39
LCA5-201ENST00000369846 C16orf74Q96GX8 76 aa6.37□□□□□ -1.39
LCA5-201ENST00000369846 DMXL1Q9Y485 3027 aa6.37□□□□□ -1.39
LCA5-201ENST00000369846 DSCR9P59020 149 aa6.37□□□□□ -1.39
LCA5-201ENST00000369846 LINC01356Q8N9X3 169 aa6.37□□□□□ -1.39
LCA5-201ENST00000369846 RNF223E7ERA6 249 aa6.37□□□□□ -1.39
LCA5-201ENST00000369846 COL5A1P20908 1838 aaPredicted RBP6.36□□□□□ -1.39
LCA5-201ENST00000369846 DEFB4AO15263 64 aa6.36□□□□□ -1.39
LCA5-201ENST00000369846 SMCPP49901 116 aaPredicted RBP6.36□□□□□ -1.39
LCA5-201ENST00000369846 APOC4P55056 127 aa6.36□□□□□ -1.39
LCA5-201ENST00000369846 C1orf229Q6ZS94 237 aaPredicted RBP6.36□□□□□ -1.39
LCA5-201ENST00000369846 C11orf21Q9P2W6 132 aa6.36□□□□□ -1.39
LCA5-201ENST00000369846 DKK4Q9UBT3 224 aa6.36□□□□□ -1.39
LCA5-201ENST00000369846 TSPEAR-AS2P59090 65 aa6.36□□□□□ -1.39
LCA5-201ENST00000369846 Q6ZTI0 123 aa6.36□□□□□ -1.39
LCA5-201ENST00000369846 Q8N6K4 173 aa6.36□□□□□ -1.39
LCA5-201ENST00000369846 A0A096LNJ9 63 aa6.35□□□□□ -1.39
LCA5-201ENST00000369846 IGHV4-61A0A0C4DH41 118 aa6.35□□□□□ -1.39
LCA5-201ENST00000369846 POLR2KP53803 58 aaKnown RBP6.35□□□□□ -1.39
LCA5-201ENST00000369846 FAM215AQ9Y5M1 114 aa6.35□□□□□ -1.39
LCA5-201ENST00000369846 CCL18P55774 89 aa6.34□□□□□ -1.39
LCA5-201ENST00000369846 CEP295Q9C0D2 2601 aa6.34□□□□□ -1.39
LCA5-201ENST00000369846 IGKV2-24A0A0C4DH68 120 aa6.34□□□□□ -1.39
LCA5-201ENST00000369846 RNF138Q8WVD3 245 aa6.34□□□□□ -1.39
LCA5-201ENST00000369846 ADGRG4Q8IZF6 3080 aa6.34□□□□□ -1.39
LCA5-201ENST00000369846 TSHBP01222 138 aa6.34□□□□□ -1.39
LCA5-201ENST00000369846 Q8N7P7 452 aa6.34□□□□□ -1.39
LCA5-201ENST00000369846 CHCHD10Q8WYQ3 142 aaPredicted RBP6.33□□□□□ -1.4
LCA5-201ENST00000369846 ADAMTSL4-AS1Q5T5F5 129 aa6.33□□□□□ -1.4
LCA5-201ENST00000369846 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
LCA5-201ENST00000369846 TET2Q6N021 2002 aaPredicted RBP6.33□□□□□ -1.4
LCA5-201ENST00000369846 A0A087WYN8 130 aa6.33□□□□□ -1.4
LCA5-201ENST00000369846 IGIPA6NJ69 53 aa6.33□□□□□ -1.4
LCA5-201ENST00000369846 K7EMT4 169 aa6.33□□□□□ -1.4
LCA5-201ENST00000369846 CCL24O00175 119 aa6.33□□□□□ -1.4
LCA5-201ENST00000369846 REG3AQ06141 175 aa6.33□□□□□ -1.4
LCA5-201ENST00000369846 C10orf142B7Z368 130 aa6.32□□□□□ -1.4
LCA5-201ENST00000369846 CCDC140Q96MF4 163 aa6.32□□□□□ -1.4
LCA5-201ENST00000369846 IGKV2-28A0A075B6P5 120 aa6.32□□□□□ -1.4
LCA5-201ENST00000369846 IGKV2D-28P01615 120 aa6.32□□□□□ -1.4
LCA5-201ENST00000369846 C5orf56Q8N8D9 126 aa6.32□□□□□ -1.4
LCA5-201ENST00000369846 PRO0255Q9UI72 69 aa6.32□□□□□ -1.4
LCA5-201ENST00000369846 SPART-AS1P0CW21 52 aa6.31□□□□□ -1.4
LCA5-201ENST00000369846 RNASE3P12724 160 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms