RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 CDC42SE2Q9NRR3 84 aa12.05□□□□□ -0.48
UBE3D-203ENST00000369747 GAGE10A6NGK3 116 aa12.05□□□□□ -0.48
UBE3D-203ENST00000369747 IGHV3-30P01768 117 aa12.05□□□□□ -0.48
UBE3D-203ENST00000369747 SPINK8P0C7L1 97 aa12.05□□□□□ -0.48
UBE3D-203ENST00000369747 IGHV3-30-5P0DP03 117 aa12.05□□□□□ -0.48
UBE3D-203ENST00000369747 FAM19A3Q7Z5A8 133 aa12.05□□□□□ -0.48
UBE3D-203ENST00000369747 VSIG2Q96IQ7 327 aa12.05□□□□□ -0.48
UBE3D-203ENST00000369747 COX6A2Q02221 97 aa12.04□□□□□ -0.48
UBE3D-203ENST00000369747 SMAGPQ0VAQ4 97 aa12.04□□□□□ -0.48
UBE3D-203ENST00000369747 CDKN2A-AS1Q9UH64 79 aa12.04□□□□□ -0.48
UBE3D-203ENST00000369747 IGLL5B9A064 214 aa12.03□□□□□ -0.48
UBE3D-203ENST00000369747 K7EP34 96 aa12.03□□□□□ -0.48
UBE3D-203ENST00000369747 UBE2L6O14933 153 aa12.03□□□□□ -0.48
UBE3D-203ENST00000369747 ATP5G1P05496 136 aa12.03□□□□□ -0.48
UBE3D-203ENST00000369747 HTN3P15516 51 aa12.03□□□□□ -0.48
UBE3D-203ENST00000369747 LINC00242Q5T6M2 205 aa12.03□□□□□ -0.48
UBE3D-203ENST00000369747 H7C423 109 aa12.03□□□□□ -0.48
UBE3D-203ENST00000369747 A0A0J9YXY3 114 aa12.02□□□□□ -0.49
UBE3D-203ENST00000369747 TMEM238LA0A1B0GVL6 79 aa12.02□□□□□ -0.49
UBE3D-203ENST00000369747 A6NJY4 79 aa12.02□□□□□ -0.49
UBE3D-203ENST00000369747 FABP2P12104 132 aa12.02□□□□□ -0.49
UBE3D-203ENST00000369747 GTF2H5Q6ZYL4 71 aa12.02□□□□□ -0.49
UBE3D-203ENST00000369747 TRBV6-8A0A0A6YYG3 113 aa12.01□□□□□ -0.49
UBE3D-203ENST00000369747 HERVK_113P63121 156 aa12.01□□□□□ -0.49
UBE3D-203ENST00000369747 SPCS1Q9Y6A9 102 aa12.01□□□□□ -0.49
UBE3D-203ENST00000369747 CSMD3Q7Z407 3707 aa12□□□□□ -0.49
UBE3D-203ENST00000369747 TRAV13-1A0A0B4J241 112 aa12□□□□□ -0.49
UBE3D-203ENST00000369747 F5H768 121 aa12□□□□□ -0.49
UBE3D-203ENST00000369747 TMEM101Q96IK0 257 aa12□□□□□ -0.49
UBE3D-203ENST00000369747 NDUFA12Q9UI09 145 aa12□□□□□ -0.49
UBE3D-203ENST00000369747 GYPEP15421 78 aa11.99□□□□□ -0.49
UBE3D-203ENST00000369747 GAGE6Q13070 117 aa11.99□□□□□ -0.49
UBE3D-203ENST00000369747 PRO0255Q9UI72 69 aa11.99□□□□□ -0.49
UBE3D-203ENST00000369747 ZFAND6Q6FIF0 208 aa11.98□□□□□ -0.49
UBE3D-203ENST00000369747 LITAFQ99732 161 aa11.98□□□□□ -0.49
UBE3D-203ENST00000369747 TRAV26-1A0A087WT03 109 aa11.98□□□□□ -0.49
UBE3D-203ENST00000369747 IGLV5-39A0A0G2JS06 123 aa11.98□□□□□ -0.49
UBE3D-203ENST00000369747 TMEM238C9JI98 176 aa11.98□□□□□ -0.49
UBE3D-203ENST00000369747 ATP6V0E2Q8NHE4 81 aa11.97□□□□□ -0.49
UBE3D-203ENST00000369747 DEFB131BA0A096LNP1 70 aa11.96□□□□□ -0.49
UBE3D-203ENST00000369747 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.49
UBE3D-203ENST00000369747 IGLV4-60A0A075B6I1 120 aa11.96□□□□□ -0.5
UBE3D-203ENST00000369747 APOMO95445 188 aa11.96□□□□□ -0.5
UBE3D-203ENST00000369747 CFC1BP0CG36 223 aa11.96□□□□□ -0.5
UBE3D-203ENST00000369747 CFC1P0CG37 223 aa11.96□□□□□ -0.5
UBE3D-203ENST00000369747 PGPEP1Q9NXJ5 209 aa11.96□□□□□ -0.5
UBE3D-203ENST00000369747 SMIM1B2RUZ4 78 aa11.95□□□□□ -0.5
UBE3D-203ENST00000369747 PAX4O43316 350 aa11.95□□□□□ -0.5
UBE3D-203ENST00000369747 MUSTN1Q8IVN3 82 aa11.95□□□□□ -0.5
UBE3D-203ENST00000369747 DNAH7Q8WXX0 4024 aa11.94□□□□□ -0.5
UBE3D-203ENST00000369747 NDUFA1O15239 70 aa11.94□□□□□ -0.5
UBE3D-203ENST00000369747 ADAMTSL4-AS1Q5T5F5 129 aa11.94□□□□□ -0.5
UBE3D-203ENST00000369747 A4D1N5 150 aa11.93□□□□□ -0.5
UBE3D-203ENST00000369747 TRAV10A0A0B4J240 114 aa11.92□□□□□ -0.5
UBE3D-203ENST00000369747 EIF4EBP3O60516 100 aaPredicted RBP11.92□□□□□ -0.5
UBE3D-203ENST00000369747 TSPAN13O95857 204 aa11.92□□□□□ -0.5
UBE3D-203ENST00000369747 SPANXDQ9BXN6 97 aa11.92□□□□□ -0.5
UBE3D-203ENST00000369747 SPANXCQ9NY87 97 aa11.92□□□□□ -0.5
UBE3D-203ENST00000369747 A0A096LPF7 62 aa11.92□□□□□ -0.5
UBE3D-203ENST00000369747 RPL24P83731 157 aaKnown RBP11.92□□□□□ -0.5
UBE3D-203ENST00000369747 TENM2Q9NT68 2774 aa11.91□□□□□ -0.5
UBE3D-203ENST00000369747 IGKV3OR2-268A0A0C4DH90 116 aa11.9□□□□□ -0.51
UBE3D-203ENST00000369747 TIMM17BO60830 172 aa11.9□□□□□ -0.51
UBE3D-203ENST00000369747 MIAQ16674 131 aa11.9□□□□□ -0.51
UBE3D-203ENST00000369747 STARD9Q9P2P6 4700 aa11.89□□□□□ -0.51
UBE3D-203ENST00000369747 Q9H8V8 135 aa11.89□□□□□ -0.51
UBE3D-203ENST00000369747 PRO1854Q9UHT4 67 aa11.89□□□□□ -0.51
UBE3D-203ENST00000369747 A0A0B4J2C4 111 aa11.88□□□□□ -0.51
UBE3D-203ENST00000369747 PRSS2P07478 247 aa11.88□□□□□ -0.51
UBE3D-203ENST00000369747 LYSTQ99698 3801 aa11.88□□□□□ -0.51
UBE3D-203ENST00000369747 A0A1B0GUV1 79 aa11.87□□□□□ -0.51
UBE3D-203ENST00000369747 ZNF625Q96I27 306 aaPredicted RBP11.87□□□□□ -0.51
UBE3D-203ENST00000369747 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.86□□□□□ -0.51
UBE3D-203ENST00000369747 RBX1P62877 108 aa11.86□□□□□ -0.51
UBE3D-203ENST00000369747 IGHV3OR16-9A0A0B4J2B5 98 aa11.86□□□□□ -0.51
UBE3D-203ENST00000369747 TMEM262E9PQX1 116 aa11.86□□□□□ -0.51
UBE3D-203ENST00000369747 H3BNG1 76 aa11.86□□□□□ -0.51
UBE3D-203ENST00000369747 SFTA2Q6UW10 78 aa11.86□□□□□ -0.51
UBE3D-203ENST00000369747 ICOSQ9Y6W8 199 aa11.86□□□□□ -0.51
UBE3D-203ENST00000369747 PLECQ15149 4684 aaKnown RBP11.85□□□□□ -0.51
UBE3D-203ENST00000369747 H3BMG7 143 aa11.85□□□□□ -0.51
UBE3D-203ENST00000369747 IGHV3-33P01772 117 aa11.85□□□□□ -0.51
UBE3D-203ENST00000369747 MRPL23Q16540 153 aaKnown RBP11.85□□□□□ -0.51
UBE3D-203ENST00000369747 DYNC2H1Q8NCM8 4307 aaKnown RBP11.84□□□□□ -0.51
UBE3D-203ENST00000369747 LINC00959A0A1B0GUT2 108 aa11.84□□□□□ -0.51
UBE3D-203ENST00000369747 NPC2P61916 151 aa11.84□□□□□ -0.51
UBE3D-203ENST00000369747 DAND5Q8N907 189 aa11.84□□□□□ -0.51
UBE3D-203ENST00000369747 OCIAD2Q56VL3 154 aa11.84□□□□□ -0.51
UBE3D-203ENST00000369747 LOC107984156A0A0G2JMH3 177 aa11.83□□□□□ -0.52
UBE3D-203ENST00000369747 CIRBPQ14011 172 aaKnown RBP11.83□□□□□ -0.52
UBE3D-203ENST00000369747 ARL17AQ8IVW1 177 aa11.83□□□□□ -0.52
UBE3D-203ENST00000369747 IFITM1P13164 125 aa11.82□□□□□ -0.52
UBE3D-203ENST00000369747 A0A087WZ39 114 aa11.82□□□□□ -0.52
UBE3D-203ENST00000369747 COX7B2Q8TF08 81 aa11.82□□□□□ -0.52
UBE3D-203ENST00000369747 HERV-K104P63124 156 aa11.81□□□□□ -0.52
UBE3D-203ENST00000369747 ERG28Q9UKR5 140 aa11.8□□□□□ -0.52
UBE3D-203ENST00000369747 F8W1H4 67 aa11.8□□□□□ -0.52
UBE3D-203ENST00000369747 LYRM7Q5U5X0 104 aa11.8□□□□□ -0.52
UBE3D-203ENST00000369747 C5orf38Q86SI9 138 aa11.8□□□□□ -0.52
UBE3D-203ENST00000369747 PRO0461Q9UI25 63 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms