RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 C11orf44Q8N8P7 122 aa11.55□□□□□ -0.56
SYNCRIP-202ENST00000369622 MRAPQ8TCY5 172 aa11.55□□□□□ -0.56
SYNCRIP-202ENST00000369622 FAM218AQ96MZ4 157 aa11.55□□□□□ -0.56
SYNCRIP-202ENST00000369622 USP17L23D6RBM5 183 aa11.54□□□□□ -0.56
SYNCRIP-202ENST00000369622 DGAT2L7PQ6IED9 249 aa11.54□□□□□ -0.56
SYNCRIP-202ENST00000369622 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
SYNCRIP-202ENST00000369622 CXCL5P42830 114 aa11.54□□□□□ -0.56
SYNCRIP-202ENST00000369622 DYNLRB2Q8TF09 96 aa11.53□□□□□ -0.56
SYNCRIP-202ENST00000369622 RBMY1BA6NDE4 496 aaKnown RBP11.53□□□□□ -0.56
SYNCRIP-202ENST00000369622 RBMY1EA6NEQ0 496 aaKnown RBP11.53□□□□□ -0.56
SYNCRIP-202ENST00000369622 RBMY1DP0C7P1 496 aaKnown RBP11.53□□□□□ -0.56
SYNCRIP-202ENST00000369622 UBE2E2Q96LR5 201 aa11.53□□□□□ -0.56
SYNCRIP-202ENST00000369622 XCL2Q9UBD3 114 aa11.53□□□□□ -0.56
SYNCRIP-202ENST00000369622 DNAL4O96015 105 aa11.52□□□□□ -0.56
SYNCRIP-202ENST00000369622 LINC01561Q8N1V8 128 aa11.52□□□□□ -0.57
SYNCRIP-202ENST00000369622 C22orf24Q9Y442 160 aa11.52□□□□□ -0.57
SYNCRIP-202ENST00000369622 NF1P21359 2839 aa11.52□□□□□ -0.57
SYNCRIP-202ENST00000369622 LINC00467Q9BRT7 94 aa11.52□□□□□ -0.57
SYNCRIP-202ENST00000369622 ZNF702PQ9H963 129 aa11.52□□□□□ -0.57
SYNCRIP-202ENST00000369622 FAM236DA0A1B0GTK5 79 aa11.51□□□□□ -0.57
SYNCRIP-202ENST00000369622 FAM236CP0DP71 79 aa11.51□□□□□ -0.57
SYNCRIP-202ENST00000369622 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
SYNCRIP-202ENST00000369622 COX7A2LO14548 114 aa11.51□□□□□ -0.57
SYNCRIP-202ENST00000369622 LINC00846Q9NV44 126 aa11.51□□□□□ -0.57
SYNCRIP-202ENST00000369622 TRAV23DV6A0A075B6W5 121 aa11.5□□□□□ -0.57
SYNCRIP-202ENST00000369622 IGHV1-58A0A0C4DH39 117 aa11.5□□□□□ -0.57
SYNCRIP-202ENST00000369622 IGHV3-53P01767 116 aa11.5□□□□□ -0.57
SYNCRIP-202ENST00000369622 MALP21145 153 aa11.5□□□□□ -0.57
SYNCRIP-202ENST00000369622 ZNF415Q09FC8 603 aa11.5□□□□□ -0.57
SYNCRIP-202ENST00000369622 FAM104AQ969W3 186 aa11.5□□□□□ -0.57
SYNCRIP-202ENST00000369622 MRPS36P82909 103 aaKnown RBP11.5□□□□□ -0.57
SYNCRIP-202ENST00000369622 PRO0628Q9UI54 55 aa11.49□□□□□ -0.57
SYNCRIP-202ENST00000369622 A0A1W2PRX2 142 aa11.49□□□□□ -0.57
SYNCRIP-202ENST00000369622 PRB1P04280 392 aa11.49□□□□□ -0.57
SYNCRIP-202ENST00000369622 TMEM243Q9BU79 118 aa11.49□□□□□ -0.57
SYNCRIP-202ENST00000369622 SPANXDQ9BXN6 97 aa11.49□□□□□ -0.57
SYNCRIP-202ENST00000369622 SPANXCQ9NY87 97 aa11.49□□□□□ -0.57
SYNCRIP-202ENST00000369622 CDKN2A-AS1Q9UH64 79 aa11.49□□□□□ -0.57
SYNCRIP-202ENST00000369622 UBE2D4Q9Y2X8 147 aa11.48□□□□□ -0.57
SYNCRIP-202ENST00000369622 DSCR9P59020 149 aa11.48□□□□□ -0.57
SYNCRIP-202ENST00000369622 VSIG2Q96IQ7 327 aa11.48□□□□□ -0.57
SYNCRIP-202ENST00000369622 CHCHD7Q9BUK0 85 aa11.48□□□□□ -0.57
SYNCRIP-202ENST00000369622 TMEM89A2RUT3 159 aa11.47□□□□□ -0.57
SYNCRIP-202ENST00000369622 Q6YL49 198 aa11.46□□□□□ -0.57
SYNCRIP-202ENST00000369622 TRGV1A0A0A0MS02 117 aa11.46□□□□□ -0.57
SYNCRIP-202ENST00000369622 PRIMA1Q86XR5 153 aa11.46□□□□□ -0.57
SYNCRIP-202ENST00000369622 MAP6D1Q9H9H5 199 aa11.46□□□□□ -0.57
SYNCRIP-202ENST00000369622 GHRHP01286 108 aa11.46□□□□□ -0.58
SYNCRIP-202ENST00000369622 NIPBLQ6KC79 2804 aaeCLIP11.46□□□□□ -0.58
SYNCRIP-202ENST00000369622 SOSTDC1Q6X4U4 206 aa11.44□□□□□ -0.58
SYNCRIP-202ENST00000369622 LINC00308Q8TCZ7 52 aa11.44□□□□□ -0.58
SYNCRIP-202ENST00000369622 INAFM2P0DMQ5 153 aa11.44□□□□□ -0.58
SYNCRIP-202ENST00000369622 PIK3CD-AS1Q5SR53 167 aa11.44□□□□□ -0.58
SYNCRIP-202ENST00000369622 BRK1Q8WUW1 75 aa11.44□□□□□ -0.58
SYNCRIP-202ENST00000369622 Q9H8V8 135 aa11.44□□□□□ -0.58
SYNCRIP-202ENST00000369622 NCR3O14931 201 aa11.44□□□□□ -0.58
SYNCRIP-202ENST00000369622 SEC61GP60059 68 aa11.44□□□□□ -0.58
SYNCRIP-202ENST00000369622 COX6A2Q02221 97 aa11.43□□□□□ -0.58
SYNCRIP-202ENST00000369622 BEAN1Q3B7T3 259 aa11.43□□□□□ -0.58
SYNCRIP-202ENST00000369622 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.43□□□□□ -0.58
SYNCRIP-202ENST00000369622 INSP01308 110 aa11.43□□□□□ -0.58
SYNCRIP-202ENST00000369622 KRTAP10-9P60411 292 aa11.43□□□□□ -0.58
SYNCRIP-202ENST00000369622 MTORP42345 2549 aa11.42□□□□□ -0.58
SYNCRIP-202ENST00000369622 SLPIP03973 132 aa11.42□□□□□ -0.58
SYNCRIP-202ENST00000369622 F8WDY8 70 aa11.42□□□□□ -0.58
SYNCRIP-202ENST00000369622 RPL28P46779 137 aaKnown RBP11.41□□□□□ -0.58
SYNCRIP-202ENST00000369622 FAM19A1Q7Z5A9 133 aa11.41□□□□□ -0.58
SYNCRIP-202ENST00000369622 STHQ8IWL8 128 aa11.41□□□□□ -0.58
SYNCRIP-202ENST00000369622 IGKV3OR2-268A0A0C4DH90 116 aa11.41□□□□□ -0.58
SYNCRIP-202ENST00000369622 IGHV4-31P0DP07 118 aa11.41□□□□□ -0.58
SYNCRIP-202ENST00000369622 TMEM86BQ8N661 226 aa11.41□□□□□ -0.58
SYNCRIP-202ENST00000369622 ACANP16112 2415 aa11.4□□□□□ -0.58
SYNCRIP-202ENST00000369622 C11orf72Q8NBR9 251 aa11.4□□□□□ -0.58
SYNCRIP-202ENST00000369622 LINC00474Q9P2X8 69 aa11.4□□□□□ -0.58
SYNCRIP-202ENST00000369622 DEFB114Q30KQ6 69 aa11.4□□□□□ -0.58
SYNCRIP-202ENST00000369622 FN1P02751 2386 aaKnown RBP11.4□□□□□ -0.59
SYNCRIP-202ENST00000369622 A0A096LNT2 108 aa11.39□□□□□ -0.59
SYNCRIP-202ENST00000369622 A0A087WYN8 130 aa11.39□□□□□ -0.59
SYNCRIP-202ENST00000369622 SNURFQ9Y675 71 aa11.39□□□□□ -0.59
SYNCRIP-202ENST00000369622 Q6ZTI0 123 aa11.38□□□□□ -0.59
SYNCRIP-202ENST00000369622 Q6JHZ5 121 aa11.36□□□□□ -0.59
SYNCRIP-202ENST00000369622 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
SYNCRIP-202ENST00000369622 Q96MF0 132 aa11.36□□□□□ -0.59
SYNCRIP-202ENST00000369622 ODF3L2Q3SX64 289 aa11.35□□□□□ -0.59
SYNCRIP-202ENST00000369622 LINC00242Q5T6M2 205 aa11.35□□□□□ -0.59
SYNCRIP-202ENST00000369622 XCL1P47992 114 aa11.35□□□□□ -0.59
SYNCRIP-202ENST00000369622 RPL36AP83881 106 aaKnown RBP11.35□□□□□ -0.59
SYNCRIP-202ENST00000369622 C4orf3Q8WVX3 66 aa11.35□□□□□ -0.59
SYNCRIP-202ENST00000369622 RPL36ALQ969Q0 106 aaKnown RBP11.35□□□□□ -0.59
SYNCRIP-202ENST00000369622 V9GYY9 64 aa11.35□□□□□ -0.59
SYNCRIP-202ENST00000369622 NOP10Q9NPE3 64 aaKnown RBP11.35□□□□□ -0.59
SYNCRIP-202ENST00000369622 C1orf158Q8N1D5 194 aa11.34□□□□□ -0.59
SYNCRIP-202ENST00000369622 TOMM7Q9P0U1 55 aa11.34□□□□□ -0.59
SYNCRIP-202ENST00000369622 FP248Q71RG6 208 aaPredicted RBP11.33□□□□□ -0.6
SYNCRIP-202ENST00000369622 NDUFA1O15239 70 aa11.33□□□□□ -0.6
SYNCRIP-202ENST00000369622 RNASE1P07998 156 aaKnown RBP11.33□□□□□ -0.6
SYNCRIP-202ENST00000369622 SS18Q15532 418 aa11.33□□□□□ -0.6
SYNCRIP-202ENST00000369622 C1orf195Q5TG92 126 aa11.33□□□□□ -0.6
SYNCRIP-202ENST00000369622 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
SYNCRIP-202ENST00000369622 UBE2L6O14933 153 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms